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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0670200-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:28339687:28340470:1 gene:Os07g0670200 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os07t0670200-01)
Sequence

ATGGCGTACAGGGCCTTGGAGGTGACGCTCATCTCGGCGAGGAATCTGAAGAAGGTGAAC
TTGATCACTCCCATGGAGGTGTACGCCGTCGTCTCCGTCTCCGGCAACCCGCTCGCCCGC
CAGTGCACGCTCCCCGACCGCCACGGCGGCCGCAACCCGACGTGGAACGCCACGCTCCAC
CTCGCCGTCCCCGCCGCCGCGCCGGGCGCGTTCCTCCACGTCCTCCTCCGCACCGAGCGC
GCCCTCGGCGACCGCGACGTCGGCGAGGTGTTCGTCCCCGTCGCCGACCTGCAGCTCGCC
GCCGCCGCGCACTACCAGTACCTGGTCCACAAGGTGCAGAGCACCACCGAGCACTGCGGC
GTGCTCAGCCTGTCGTACCGGCTAGGCCCCGTCGTCGTGCCGGCGCCGCCGCTGGCAGCG
GACACCGGCGCTGTCCCGGCGTACCTGGTGGTGCCGTGCTACGCGAACGCGCCGCCGTAC
GTCTACCTGTCGCCGGCCAATCCTGCCCGCGGCGAGGCCGCGTCGGCGTCGCCGTCGCCG
CCGCCGCGGCGCAAGAGGAGCGGTGACTTTGGGCAGTGGCTCGGCGGCGCCGTCCGGGGA
ATGTTGTCCGGCGAGGCCATGTCGCCGGACACGGCGGCCTACGACGCCGGGTACAAAACC
CTGATCGGGGTGGCTGATGGCAGACGTGTCAAGTTCTAG

Peptide Sequence

PEP ID

Os07t0670200-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:28339687:28340470:1 gene:Os07g0670200 transcript:Os07t0670200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os07t0670200-01)
Sequence

MAYRALEVTLISARNLKKVNLITPMEVYAVVSVSGNPLARQCTLPDRHGGRNPTWNATLH
LAVPAAAPGAFLHVLLRTERALGDRDVGEVFVPVADLQLAAAAHYQYLVHKVQSTTEHCG
VLSLSYRLGPVVVPAPPLAADTGAVPAYLVVPCYANAPPYVYLSPANPARGEAASASPSP
PPRRKRSGDFGQWLGGAVRGMLSGEAMSPDTAAYDAGYKTLIGVADGRRVKF

Transcript Sequence

Transcript ID

Os07t0670200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:28339687:28340470:1 gene:Os07g0670200 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os07t0670200-01)
Sequence

AAGCTATAGCTCAGGTGACTGACAATGGCGTACAGGGCCTTGGAGGTGACGCTCATCTCG
GCGAGGAATCTGAAGAAGGTGAACTTGATCACTCCCATGGAGGTGTACGCCGTCGTCTCC
GTCTCCGGCAACCCGCTCGCCCGCCAGTGCACGCTCCCCGACCGCCACGGCGGCCGCAAC
CCGACGTGGAACGCCACGCTCCACCTCGCCGTCCCCGCCGCCGCGCCGGGCGCGTTCCTC
CACGTCCTCCTCCGCACCGAGCGCGCCCTCGGCGACCGCGACGTCGGCGAGGTGTTCGTC
CCCGTCGCCGACCTGCAGCTCGCCGCCGCCGCGCACTACCAGTACCTGGTCCACAAGGTG
CAGAGCACCACCGAGCACTGCGGCGTGCTCAGCCTGTCGTACCGGCTAGGCCCCGTCGTC
GTGCCGGCGCCGCCGCTGGCAGCGGACACCGGCGCTGTCCCGGCGTACCTGGTGGTGCCG
TGCTACGCGAACGCGCCGCCGTACGTCTACCTGTCGCCGGCCAATCCTGCCCGCGGCGAG
GCCGCGTCGGCGTCGCCGTCGCCGCCGCCGCGGCGCAAGAGGAGCGGTGACTTTGGGCAG
TGGCTCGGCGGCGCCGTCCGGGGAATGTTGTCCGGCGAGGCCATGTCGCCGGACACGGCG
GCCTACGACGCCGGGTACAAAACCCTGATCGGGGTGGCTGATGGCAGACGTGTCAAGTTC
TAGCTAGTAGGAGTACTATTCCAGATTAGCGTGGCTTGAATAAAATGGAAAAGGTTTCTT
ATGT