Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0670000-02
CDS Infomation	cds chromosome:IRGSP-1.0:7:28335377:28337565:-1 gene:Os07g0670000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0670000-01);Hypothetical conserved gene. (Os07t0670000-02)
Sequence	CGGATCCGCACGCTCTCCACCGCTGCCGCCCACCACCCGTTCGACGGAATTCCCCACCCG TCGCTCGCCCGCCACCGCCGCGTCAACCCCATCGCCTTCTCGGCCGCCGTCAGGGCGTCC GACCCGGCCTCCCTCCCGGCGCTCCACGCCGTCGCCGTAACCACCGGCCTCCACGGCTTC GCCGCCGTGACCAACTCCCTCGCCGCCCGCTACGCCAAGACCGGGTCGTTCCCTTCCGCC GTCGGGGTGTTCGCCGCGGCGCGGGCGAGGGATGTCAGCTCCTACAACACCATCCTCTCC GCGTTCCCTGACCCGGCCGAGGCGCTCGACTTCGCGTCGTGGATGCTCCGCTCCGGCGCC GTGCGGCCCGACGCCGTCACGTGCACCGTCGCGCTCTCGCTGGCCGCCGGCCGGGGGGAG GGCTTCCTCGTGCGGCAGCTGCACGCGCTGGCTTGGCGGTCCGGGCTCGCGGCTGATGTG TTCGTCGGCAACGCGCTCGTCACTGCGTACTCACGTGGAGGGTCTCTCGGGGAGGCCAGG AGTGTGTTCGACGATATGCCGGCGAGGGACCTCGTCTCATGGAACGCGTTGATCTGCGGG CTCGCGCAAGACGGCGACTGCCCGGCCGAGGTGATTGGCGTGTTCCTCCGGATGCTCAGG GACGGCGACGTCCAGCCTGACCGGATATCGGTCTGCAGCGTGATCCCGGCATGTGGCGGC GAGGGGAAGCTCGAGCTCGGCCGGCAAGTCCATGGCTTTGCGGTGAAGCTGGGCGTCGAG GGATACGTCTCCATCGGCAACGTGCTCGTCGCGATGTACTACAAGTGCGGCGCTCCCGGC AGCGCCCGGAGGCTGTTCGACGCCATGAGCGAGCGCGACGTCGTGTCATGGACCACGGCC ATCTCCATGGACGGCGAGGACGCCCTCACGCTGTTCAATGGCATGCGGCGAGACGGCGTG CCGCCGAACGAGGTCACCTTCGTGGCGCTGATGTCGGCGCTGCCAGCGGACTGTCCGGCG AGGGGAGCGCAGATGGTCCACGCGGCGTGCCTCAAGGCCGCCGTGTCCGGCGAAGCGGCG GCGTCGAACAGCCTCATCACCATGTATGCCAAGGCGCGTCGCATGGACGACGCGAGGATG GTGTTCGACCTCATGCCTCGCCGGGAGATCATCGCGTGGAACGCTGTGATCTCGGGCTAC GCGCAGAACGGCCGGTGCAACGACGCCCTCGAGCTCTTCTCGTCCATGGCCAGGTGCCTG ACACCCAACGAGACCACGTTCGCGAGCGTCCTCAGCGCGGTGACCGCGGTGGAGACGGTG TCCATGGCGTACGGCCAGATGTACCACTCCAGGGCTCTCAGCATGGGCTTCGGCGACAGC GAGTACGTCGCCGGCGCCCTCATCGACATGTACGCGAAGCGTGGCAACTTGGAAGAGTCC CGGAAGGCGTTCCACGAGACGGAGCAGCGGAGCCTCATCGCCTGGACGGCGATCATCTCG GCGAACGCCAGGCACGGGAGCTACGGCGCCGTCATGAGCCTCTTCGGCGACATGGCGCGC TCCGGCGTCGCACCGGACGGCGTCGTGCTCCTCGCCGTCCTCACGGCCTGCCGGTACGGC GGGATGGTCGACGCCGGCAGGGACATCTTCGACTCGATGGCTGCCGATCGCGGCGTCGAG CTGTGGCCGGAGCACTACTCCTGCGTCGTCGACATGTTAGGCCGGGCAGGGAGGCTGGCG GAGGCTGAGGAGCTCATGATGCGGATGCCGGCGGGGCCGAGCGTGTCGGCGCTGCAGAGC TTGCTCGGAGCCTGCAGAATCCATGGCGACGCGGAGATCGGCGAGAGGATCGCCAGAATT TTGACGGAGAAGGAGCCGACGGAGTCCGGCGCGTACGTCCTCCTGTCGAACATCTACGCC GACGTGGGCGACTGGGACGGCGTCGCCAAGGTGAGGAGGAAGATGAGGGACAGAGGCGTC AAGAAGGAGATCGGGTTCAGCTGGGTGGACGCCGGCGCTGGCGAGGCACTGCATTTGCAC AAGTTTTCGTCGGACGACACGACGCATCCGCGTACAGAAGAGATATACGCAGTGGCCGAT GTGTTAGGCTGGGAGATGAAATTTCTGAAGAATTGTTCGCAAATGGAAATGATCTTGATC TGA

Peptide Sequence

PEP ID	Os07t0670000-02
PEP Infomation	pep chromosome:IRGSP-1.0:7:28335377:28337565:-1 gene:Os07g0670000 transcript:Os07t0670000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0670000-01);Hypothetical conserved gene. (Os07t0670000-02)
Sequence	RIRTLSTAAAHHPFDGIPHPSLARHRRVNPIAFSAAVRASDPASLPALHAVAVTTGLHGF AAVTNSLAARYAKTGSFPSAVGVFAAARARDVSSYNTILSAFPDPAEALDFASWMLRSGA VRPDAVTCTVALSLAAGRGEGFLVRQLHALAWRSGLAADVFVGNALVTAYSRGGSLGEAR SVFDDMPARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGDVQPDRISVCSVIPACGG EGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTA ISMDGEDALTLFNGMRRDGVPPNEVTFVALMSALPADCPARGAQMVHAACLKAAVSGEAA ASNSLITMYAKARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSSMARCL TPNETTFASVLSAVTAVETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEES RKAFHETEQRSLIAWTAIISANARHGSYGAVMSLFGDMARSGVAPDGVVLLAVLTACRYG GMVDAGRDIFDSMAADRGVELWPEHYSCVVDMLGRAGRLAEAEELMMRMPAGPSVSALQS LLGACRIHGDAEIGERIARILTEKEPTESGAYVLLSNIYADVGDWDGVAKVRRKMRDRGV KKEIGFSWVDAGAGEALHLHKFSSDDTTHPRTEEIYAVADVLGWEMKFLKNCSQMEMILI

Transcript Sequence

Transcript ID	Os07t0670000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:28335377:28337565:-1 gene:Os07g0670000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0670000-01);Hypothetical conserved gene. (Os07t0670000-02)
Sequence	CGGATCCGCACGCTCTCCACCGCTGCCGCCCACCACCCGTTCGACGGAATTCCCCACCCG TCGCTCGCCCGCCACCGCCGCGTCAACCCCATCGCCTTCTCGGCCGCCGTCAGGGCGTCC GACCCGGCCTCCCTCCCGGCGCTCCACGCCGTCGCCGTAACCACCGGCCTCCACGGCTTC GCCGCCGTGACCAACTCCCTCGCCGCCCGCTACGCCAAGACCGGGTCGTTCCCTTCCGCC GTCGGGGTGTTCGCCGCGGCGCGGGCGAGGGATGTCAGCTCCTACAACACCATCCTCTCC GCGTTCCCTGACCCGGCCGAGGCGCTCGACTTCGCGTCGTGGATGCTCCGCTCCGGCGCC GTGCGGCCCGACGCCGTCACGTGCACCGTCGCGCTCTCGCTGGCCGCCGGCCGGGGGGAG GGCTTCCTCGTGCGGCAGCTGCACGCGCTGGCTTGGCGGTCCGGGCTCGCGGCTGATGTG TTCGTCGGCAACGCGCTCGTCACTGCGTACTCACGTGGAGGGTCTCTCGGGGAGGCCAGG AGTGTGTTCGACGATATGCCGGCGAGGGACCTCGTCTCATGGAACGCGTTGATCTGCGGG CTCGCGCAAGACGGCGACTGCCCGGCCGAGGTGATTGGCGTGTTCCTCCGGATGCTCAGG GACGGCGACGTCCAGCCTGACCGGATATCGGTCTGCAGCGTGATCCCGGCATGTGGCGGC GAGGGGAAGCTCGAGCTCGGCCGGCAAGTCCATGGCTTTGCGGTGAAGCTGGGCGTCGAG GGATACGTCTCCATCGGCAACGTGCTCGTCGCGATGTACTACAAGTGCGGCGCTCCCGGC AGCGCCCGGAGGCTGTTCGACGCCATGAGCGAGCGCGACGTCGTGTCATGGACCACGGCC ATCTCCATGGACGGCGAGGACGCCCTCACGCTGTTCAATGGCATGCGGCGAGACGGCGTG CCGCCGAACGAGGTCACCTTCGTGGCGCTGATGTCGGCGCTGCCAGCGGACTGTCCGGCG AGGGGAGCGCAGATGGTCCACGCGGCGTGCCTCAAGGCCGCCGTGTCCGGCGAAGCGGCG GCGTCGAACAGCCTCATCACCATGTATGCCAAGGCGCGTCGCATGGACGACGCGAGGATG GTGTTCGACCTCATGCCTCGCCGGGAGATCATCGCGTGGAACGCTGTGATCTCGGGCTAC GCGCAGAACGGCCGGTGCAACGACGCCCTCGAGCTCTTCTCGTCCATGGCCAGGTGCCTG ACACCCAACGAGACCACGTTCGCGAGCGTCCTCAGCGCGGTGACCGCGGTGGAGACGGTG TCCATGGCGTACGGCCAGATGTACCACTCCAGGGCTCTCAGCATGGGCTTCGGCGACAGC GAGTACGTCGCCGGCGCCCTCATCGACATGTACGCGAAGCGTGGCAACTTGGAAGAGTCC CGGAAGGCGTTCCACGAGACGGAGCAGCGGAGCCTCATCGCCTGGACGGCGATCATCTCG GCGAACGCCAGGCACGGGAGCTACGGCGCCGTCATGAGCCTCTTCGGCGACATGGCGCGC TCCGGCGTCGCACCGGACGGCGTCGTGCTCCTCGCCGTCCTCACGGCCTGCCGGTACGGC GGGATGGTCGACGCCGGCAGGGACATCTTCGACTCGATGGCTGCCGATCGCGGCGTCGAG CTGTGGCCGGAGCACTACTCCTGCGTCGTCGACATGTTAGGCCGGGCAGGGAGGCTGGCG GAGGCTGAGGAGCTCATGATGCGGATGCCGGCGGGGCCGAGCGTGTCGGCGCTGCAGAGC TTGCTCGGAGCCTGCAGAATCCATGGCGACGCGGAGATCGGCGAGAGGATCGCCAGAATT TTGACGGAGAAGGAGCCGACGGAGTCCGGCGCGTACGTCCTCCTGTCGAACATCTACGCC GACGTGGGCGACTGGGACGGCGTCGCCAAGGTGAGGAGGAAGATGAGGGACAGAGGCGTC AAGAAGGAGATCGGGTTCAGCTGGGTGGACGCCGGCGCTGGCGAGGCACTGCATTTGCAC AAGTTTTCGTCGGACGACACGACGCATCCGCGTACAGAAGAGATATACGCAGTGGCCGAT GTGTTAGGCTGGGAGATGAAATTTCTGAAGAATTGTTCGCAAATGGAAATGATCTTGATC TGATACATCAGTATAAAATTAATCGAAAC