Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0669100-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:28272370:28276606:-1 gene:Os07g0669100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:xylose isomerase description:Similar to Xylose isomerase (EC 5.3.1.5). (Os07t0669100-01);Similar to Xylose isomerase. (Os07t0669100-02)
Sequence	ATGATGGGGGCAAAGCTTTTGCTCTTACTGGTGGCCTCATCTCTATGTCTATCTGCTGCG ATCGCTACGCAGCAAACCTGTCCGGCCGACCTCGATAGCAAGTGTGGTGATGCTGCTTCA GGGGATTGGGAAGGGGAGTTCTTCCCTGGCATCCCCAAGATCAAGTATGAGGGTCCAAGC AGCAAGAACCCGCTTGCTTACAAGTGGTACAATGCTGAGGAAGTGATTCTTGGGAAGAAG ATGAAGGATTGGATGCGGTTCAGCGTGGCCTTTTGGCATACGTTCCGTGGTACTGGAGGA GATCCTTTTGGTGCCCCTACAAAGTCTTGGCCTTGGGAGGATGGCACAAATTCGTTGGAC ATGGCTAAGAGAAGAATGAGAGCTCACTTTGAGTTCATGGAGAAGCTTGGAGTTGACAGG TGGTGCTTCCATGACAGGGATATTGCCCCTGATGGCAAAACACTCACGGAAACAAATAAA AATTTGGATGAGATAGTTGAACTGGCAAAGAAACTCCAGGAGGAGACCAATATAAAACCA CTGTGGGGGACTGCACAGCTTTTCATGCACCCGCGCTACATGCACGGTGCTGCTACTAGC CCAGAGGTTAAAGTGTATGCTTATGGTGCTGCTCAAGTTAAGAAAGCTTTAGAGGTCACC CACTACCTAGGCGGTGAAAACTATGTTTTCTGGGGAGGAAGAGAGGGTTACCAAACTCTT CTTAATACTGACATGAAGAGAGAACTTGACCATTTGGCTAGTTTTCTTCAAGCTGCAGTT GACTACAAGAAGAAGATTGGATTTAATGGAACACTCTTGATAGAGCCTAAACCACAAGAA CCCACAAAACACCAGTACGATTGGGATGTTGCAACCACATTCTCTTTCCTACAGAAATAT GGTCTAACAGGAGAATTCAAGATAAATGTTGAATGCAACCACGCTACTCTATCTGGACAT AGCTGCCACCATGAGCTTGAGACTGCAAGAATTAATGGTCTGCTTGGGAATATTGATGCC AACACTGGTGATCCCCAGATCGGTTGGGACACCGATCAGTTCCTTACAGATATTTCAGAG GCTACTTTGGTTATGTCAAGTGTGGTTAAGAATGGTGGGCTTGCACCTGGTGGATTCAAC TTTGATGCCAAATTGAGGAGGGAGAGTACTGATGTTGAGGACATGTTTCTGGCTCATATA TCGGGAATGGACACCCTAGCCCGCGGCCTTCGGAATGTTGTCAAGCTGATCGAGGATGGT TCCCTGGATGAGCTTGTTCGCAAGCGCTACCAGAGTTTTGATAGTGAGATCGGTGCCTTG ATTGAGGCTGGGAAAGGAGACTTCGAGACACTAGAGAAGAAGGTTCTGGAGTGGGGTGAA CCCATTGTTCCATCTGGCAAGCAGGAACTGGCTGAGATTCTGTTCCAAGCTGCTCTATAG

Peptide Sequence

PEP ID	Os07t0669100-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:28272370:28276606:-1 gene:Os07g0669100 transcript:Os07t0669100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:xylose isomerase description:Similar to Xylose isomerase (EC 5.3.1.5). (Os07t0669100-01);Similar to Xylose isomerase. (Os07t0669100-02)
Sequence	MMGAKLLLLLVASSLCLSAAIATQQTCPADLDSKCGDAASGDWEGEFFPGIPKIKYEGPS SKNPLAYKWYNAEEVILGKKMKDWMRFSVAFWHTFRGTGGDPFGAPTKSWPWEDGTNSLD MAKRRMRAHFEFMEKLGVDRWCFHDRDIAPDGKTLTETNKNLDEIVELAKKLQEETNIKP LWGTAQLFMHPRYMHGAATSPEVKVYAYGAAQVKKALEVTHYLGGENYVFWGGREGYQTL LNTDMKRELDHLASFLQAAVDYKKKIGFNGTLLIEPKPQEPTKHQYDWDVATTFSFLQKY GLTGEFKINVECNHATLSGHSCHHELETARINGLLGNIDANTGDPQIGWDTDQFLTDISE ATLVMSSVVKNGGLAPGGFNFDAKLRRESTDVEDMFLAHISGMDTLARGLRNVVKLIEDG SLDELVRKRYQSFDSEIGALIEAGKGDFETLEKKVLEWGEPIVPSGKQELAEILFQAAL

Transcript Sequence

Transcript ID	Os07t0669100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:28272370:28276606:-1 gene:Os07g0669100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:xylose isomerase description:Similar to Xylose isomerase (EC 5.3.1.5). (Os07t0669100-01);Similar to Xylose isomerase. (Os07t0669100-02)
Sequence	ATCCCCCTCGCGATTACCTCTCCTCTCCTCTCCTCCCCCATTCATCGTCCCCCTCCGCCG CCGCCGCTGCAGGCCCGCCGCTCCGCTGCTGGTCCTGCTGCTGCCATGATGGGGGCAAAG CTTTTGCTCTTACTGGTGGCCTCATCTCTATGTCTATCTGCTGCGATCGCTACGCAGCAA ACCTGTCCGGCCGACCTCGATAGCAAGTGTGGTGATGCTGCTTCAGGGGATTGGGAAGGG GAGTTCTTCCCTGGCATCCCCAAGATCAAGTATGAGGGTCCAAGCAGCAAGAACCCGCTT GCTTACAAGTGGTACAATGCTGAGGAAGTGATTCTTGGGAAGAAGATGAAGGATTGGATG CGGTTCAGCGTGGCCTTTTGGCATACGTTCCGTGGTACTGGAGGAGATCCTTTTGGTGCC CCTACAAAGTCTTGGCCTTGGGAGGATGGCACAAATTCGTTGGACATGGCTAAGAGAAGA ATGAGAGCTCACTTTGAGTTCATGGAGAAGCTTGGAGTTGACAGGTGGTGCTTCCATGAC AGGGATATTGCCCCTGATGGCAAAACACTCACGGAAACAAATAAAAATTTGGATGAGATA GTTGAACTGGCAAAGAAACTCCAGGAGGAGACCAATATAAAACCACTGTGGGGGACTGCA CAGCTTTTCATGCACCCGCGCTACATGCACGGTGCTGCTACTAGCCCAGAGGTTAAAGTG TATGCTTATGGTGCTGCTCAAGTTAAGAAAGCTTTAGAGGTCACCCACTACCTAGGCGGT GAAAACTATGTTTTCTGGGGAGGAAGAGAGGGTTACCAAACTCTTCTTAATACTGACATG AAGAGAGAACTTGACCATTTGGCTAGTTTTCTTCAAGCTGCAGTTGACTACAAGAAGAAG ATTGGATTTAATGGAACACTCTTGATAGAGCCTAAACCACAAGAACCCACAAAACACCAG TACGATTGGGATGTTGCAACCACATTCTCTTTCCTACAGAAATATGGTCTAACAGGAGAA TTCAAGATAAATGTTGAATGCAACCACGCTACTCTATCTGGACATAGCTGCCACCATGAG CTTGAGACTGCAAGAATTAATGGTCTGCTTGGGAATATTGATGCCAACACTGGTGATCCC CAGATCGGTTGGGACACCGATCAGTTCCTTACAGATATTTCAGAGGCTACTTTGGTTATG TCAAGTGTGGTTAAGAATGGTGGGCTTGCACCTGGTGGATTCAACTTTGATGCCAAATTG AGGAGGGAGAGTACTGATGTTGAGGACATGTTTCTGGCTCATATATCGGGAATGGACACC CTAGCCCGCGGCCTTCGGAATGTTGTCAAGCTGATCGAGGATGGTTCCCTGGATGAGCTT GTTCGCAAGCGCTACCAGAGTTTTGATAGTGAGATCGGTGCCTTGATTGAGGCTGGGAAA GGAGACTTCGAGACACTAGAGAAGAAGGTTCTGGAGTGGGGTGAACCCATTGTTCCATCT GGCAAGCAGGAACTGGCTGAGATTCTGTTCCAAGCTGCTCTATAGATGGTGCCGTGGTGC TGTTCATAGTTCTAGGAATAAAGCCTAGCACGCCTTTGGAAACGGAATGTGCATTCTATC ATTGTCTACTACGAGCAATAATCTAGTTATAGTTTAGTTATTAGCCTTCCATGCAATGAA CTTTTGTACACTACAGCATGGAACTTAAATAATGATGAGTTGTGCCTTTCTAAACTGAAA TAAAAGAGTCGGTACCTTT