Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0666900-02
CDS Infomation	cds chromosome:IRGSP-1.0:7:28164424:28169307:1 gene:Os07g0666900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NA+/H+ ANTIPORTER description:Vacuolar Na+/H+ antiporter, Salt tolerance (Os07t0666900-01);Similar to Sodium/hydrogen exchanger. (Os07t0666900-02)
Sequence	ATGGGGATGGAGGTGGCGGCGGCGCGGCTGGGGGCTCTGTACACGACCTCCGACTACGCG TCGGTGGTGTCCATCAACCTGTTCGTCGCGCTGCTCTGCGCCTGCATCGTCCTCGGCCAC CTCCTCGAGGAGAATCGCTGGGTCAATGAGTCCATCACCGCGCTCATCATCGGGCTCTGC ACCGGCGTGGTGATCTTGCTGATGACCAAAGGGAAGAGCTCGCACTTATTCGTCTTCAGT GAGGATCTCTTCTTCATCTACCTCCTCCCTCCGATCATCTTCAATGCAGGTTTTCAGGTA AAGAAAAAGCAATTCTTCCGGAATTTCATGACGATCACATTATTTGGAGCCGTCGGGACA ATGATATCCTTTTTCACAATATCTATTGCTGCCATTGCAATATTCAGCAGAATGAACATT GGAACGCTGGATGTAGGAGATTTTCTTGCAATTGGAGCCATCTTTTCTGCGACAGATTCT GTCTGCACATTGCAGGTCCTCAATCAGGATGAGACACCCTTTTTGTACAGTCTGGTATTC GGTGAAGGTGTTGTGAACGATGCTACATCAATTGTGCTTTTCAACGCACTACAGAACTTT GATCTTGTCCACATAGATGCGGCTGTCGTTCTGAAATTCTTGGGGAACTTCTTTTATTTA TTTTTGTCGAGCACCTTCCTTGGAGTATTTGCTGGATTGCTCAGTGCATACATAATCAAG AAGCTATACATTGGAAGGCATTCTACTGACCGTGAGGTTGCCCTTATGATGCTCATGGCT TACCTTTCATATATGCTGGCTGAGTTGCTAGATTTGAGCGGCATTCTCACCGTATTCTTC TGTGGTATTGTAATGTCACATTACACTTGGCATAACGTCACAGAGAGTTCAAGAGTTACA ACAAAGCACGCATTTGCAACTCTGTCCTTCATTGCTGAGACTTTTCTCTTCCTGTATGTT GGGATGGATGCATTGGATATTGAAAAATGGGAGTTTGCCAGTGACAGACCTGGCAAATCC ATTGGGATAAGCTCAATTTTGCTAGGATTGGTTCTGATTGGAAGAGCTGCTTTTGTATTC CCGCTGTCGTTCTTGTCGAACCTAACAAAGAAGGCACCGAATGAAAAAATAACCTGGAGA CAGCAAGTTGTAATATGGTGGGCTGGGCTGATGAGAGGAGCTGTGTCGATTGCTCTTGCT TACAATAAGTTTACAAGATCTGGCCATACTCAGCTGCACGGCAATGCAATAATGATCACC AGCACCATCACTGTCGTTCTTTTTAGCACTATGGTATTTGGGATGATGACAAAGCCATTG ATCAGGCTGCTGCTACCGGCCTCAGGCCATCCTGTCACCTCTGAGCCTTCATCACCAAAG TCCCTGCATTCTCCTCTCCTGACAAGCATGCAAGGTTCTGACCTCGAGAGTACAACCAAC ATTGTGAGGCCTTCCAGCCTCCGGATGCTCCTCACCAAGCCGACCCACACTGTCCACTAC TACTGGCGCAAGTTCGACGACGCGCTGATGCGACCGATGTTTGGCGGGCGCGGGTTCGTG CCCTTCTCCCCTGGATCACCAACCGAGCAGAGCCATGGAGGAAGATGA

Peptide Sequence

PEP ID	Os07t0666900-02
PEP Infomation	pep chromosome:IRGSP-1.0:7:28164424:28169307:1 gene:Os07g0666900 transcript:Os07t0666900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NA+/H+ ANTIPORTER description:Vacuolar Na+/H+ antiporter, Salt tolerance (Os07t0666900-01);Similar to Sodium/hydrogen exchanger. (Os07t0666900-02)
Sequence	MGMEVAAARLGALYTTSDYASVVSINLFVALLCACIVLGHLLEENRWVNESITALIIGLC TGVVILLMTKGKSSHLFVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTITLFGAVGT MISFFTISIAAIAIFSRMNIGTLDVGDFLAIGAIFSATDSVCTLQVLNQDETPFLYSLVF GEGVVNDATSIVLFNALQNFDLVHIDAAVVLKFLGNFFYLFLSSTFLGVFAGLLSAYIIK KLYIGRHSTDREVALMMLMAYLSYMLAELLDLSGILTVFFCGIVMSHYTWHNVTESSRVT TKHAFATLSFIAETFLFLYVGMDALDIEKWEFASDRPGKSIGISSILLGLVLIGRAAFVF PLSFLSNLTKKAPNEKITWRQQVVIWWAGLMRGAVSIALAYNKFTRSGHTQLHGNAIMIT STITVVLFSTMVFGMMTKPLIRLLLPASGHPVTSEPSSPKSLHSPLLTSMQGSDLESTTN IVRPSSLRMLLTKPTHTVHYYWRKFDDALMRPMFGGRGFVPFSPGSPTEQSHGGR

Transcript Sequence

Transcript ID	Os07t0666900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:28164424:28169307:1 gene:Os07g0666900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NA+/H+ ANTIPORTER description:Vacuolar Na+/H+ antiporter, Salt tolerance (Os07t0666900-01);Similar to Sodium/hydrogen exchanger. (Os07t0666900-02)
Sequence	ACGAAAAGAGAGAGAGAGAGAAGAGAGTTTTGTAGCGAGCTCGCGCGAATGCGAAGCCAA CCGAGAGAGGCATTCACCAACGAGCAAGAGGGGAGTGGATTGGTTGGTTAAAGCTCCGCA TCTTGCGGCGGAAATCTCGCTCTCTTCTCTGCGGTGGGTGGCCGGAGAAGTCGCCGCCGG TGAGGCATGGGGATGGAGGTGGCGGCGGCGCGGCTGGGGGCTCTGTACACGACCTCCGAC TACGCGTCGGTGGTGTCCATCAACCTGTTCGTCGCGCTGCTCTGCGCCTGCATCGTCCTC GGCCACCTCCTCGAGGAGAATCGCTGGGTCAATGAGTCCATCACCGCGCTCATCATCGGG CTCTGCACCGGCGTGGTGATCTTGCTGATGACCAAAGGGAAGAGCTCGCACTTATTCGTC TTCAGTGAGGATCTCTTCTTCATCTACCTCCTCCCTCCGATCATCTTCAATGCAGGTTTT CAGGTAAAGAAAAAGCAATTCTTCCGGAATTTCATGACGATCACATTATTTGGAGCCGTC GGGACAATGATATCCTTTTTCACAATATCTATTGCTGCCATTGCAATATTCAGCAGAATG AACATTGGAACGCTGGATGTAGGAGATTTTCTTGCAATTGGAGCCATCTTTTCTGCGACA GATTCTGTCTGCACATTGCAGGTCCTCAATCAGGATGAGACACCCTTTTTGTACAGTCTG GTATTCGGTGAAGGTGTTGTGAACGATGCTACATCAATTGTGCTTTTCAACGCACTACAG AACTTTGATCTTGTCCACATAGATGCGGCTGTCGTTCTGAAATTCTTGGGGAACTTCTTT TATTTATTTTTGTCGAGCACCTTCCTTGGAGTATTTGCTGGATTGCTCAGTGCATACATA ATCAAGAAGCTATACATTGGAAGGCATTCTACTGACCGTGAGGTTGCCCTTATGATGCTC ATGGCTTACCTTTCATATATGCTGGCTGAGTTGCTAGATTTGAGCGGCATTCTCACCGTA TTCTTCTGTGGTATTGTAATGTCACATTACACTTGGCATAACGTCACAGAGAGTTCAAGA GTTACAACAAAGCACGCATTTGCAACTCTGTCCTTCATTGCTGAGACTTTTCTCTTCCTG TATGTTGGGATGGATGCATTGGATATTGAAAAATGGGAGTTTGCCAGTGACAGACCTGGC AAATCCATTGGGATAAGCTCAATTTTGCTAGGATTGGTTCTGATTGGAAGAGCTGCTTTT GTATTCCCGCTGTCGTTCTTGTCGAACCTAACAAAGAAGGCACCGAATGAAAAAATAACC TGGAGACAGCAAGTTGTAATATGGTGGGCTGGGCTGATGAGAGGAGCTGTGTCGATTGCT CTTGCTTACAATAAGTTTACAAGATCTGGCCATACTCAGCTGCACGGCAATGCAATAATG ATCACCAGCACCATCACTGTCGTTCTTTTTAGCACTATGGTATTTGGGATGATGACAAAG CCATTGATCAGGCTGCTGCTACCGGCCTCAGGCCATCCTGTCACCTCTGAGCCTTCATCA CCAAAGTCCCTGCATTCTCCTCTCCTGACAAGCATGCAAGGTTCTGACCTCGAGAGTACA ACCAACATTGTGAGGCCTTCCAGCCTCCGGATGCTCCTCACCAAGCCGACCCACACTGTC CACTACTACTGGCGCAAGTTCGACGACGCGCTGATGCGACCGATGTTTGGCGGGCGCGGG TTCGTGCCCTTCTCCCCTGGATCACCAACCGAGCAGAGCCATGGAGGAAGATGAACAGTG CAAAGAAATGAGAATGGAATGGTTGATGAGGAGAATACATGTAAAATGTGACAGCAAAAG AGAGAAGGCAAGTTTTGGGTTTGTAGAGTTTGGCTGCTGCTAATGAGTTGTTGATAGTGC CTATATTCTTCAGAACTTCAGATGGTGCCTCACCAAGGCCTAAGAGCCAGGAGGACCTTC TGATAATGGTTCGGGATGATTGGTTTGTTCTGTCAGGATGAACCCTAGTGAGTGACACAG GGTGATGTGCTCCGACAACCTGTAAATTTTGTAGATTAACAGCCCCATTTGTACCTGTCT ACCATCTTTAGTTGGCGGGTGTTCTTTCCTAGTTGCCACCCTGCATGTAAAATGAAATTC TCCGCCAAAATAGATTTGTGTGTATAATAATTTTGCTTGGTTGATATAATGGTATGGCAT GGTTTGC