Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0664400-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:28053814:28056606:1 gene:Os07g0664400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Short-chain dehydrogenase/reductase SDR domain containing protein. (Os07t0664400-01)
Sequence

ATGTACAGCGCCATTCACCTCGTTCAGAGGGGCAAGAACAGAGCAGGGTTGACGATGTTG
ACTGGATTCGTCAACAGTTTCTCCTCTGTGTCAAGACCCGAAAGGTTGGCTGGAAAGGTG
GCCGTGATCACCGGTGGCGCAAGCGGCATCGGCGAGGCGACGGCCAAGGAGTTCATCCGC
AATGGCGCCAAGGTCATCATCGCCGACGTACAAGACGATCTCGGCCACACCGTCGCTGCC
GAGCTCGGCCCGGGCTCGGCCTACACCCGCTGCGACGTCACCGACGAGGCGCAGATCGCG
GCGACCGTGGACCTTGCCGTGGCGCGCCACGGCCACCTTGACATCCTGTACAACAACGCC
GGGATCACAAGCTCCTCTGTGGGGCACCTTGCCTCCCTCGACCTCGCCGACTTCGACCGC
GTCATGGCGGTGAACGCCCGGGCGGTGCTCGCCGGCATCAAGCACGCCGCGCGCGTGATG
GCACCACGACGCACCGGCTCCATCCTCTGCACGGCCAGCGTGGCGGGCATGATGGGCGGC
GAGATGCCCCACGCGTACAACGTCTCCAAGGCGGCGGTCATAGGTGTGGTGCGGTCCGCC
GCCGGCGAGCTGGCACGCCACGGCGTGCGGCTGAACGCGATCTCGCCGCTCGGCATCGCG
ACGCCACTGGCGATGCGCGGGTTCGGCGACATGCTGGCGTGGGCGGACGCCGAGCGGGTG
AGGCGGCTCATCGAGGAGGACATGAACGAGCTAGAGGGCGCGACGCTGGAGGCGGAGGAC
ATCGCGAGGGCGGCGGTGTACCTCGCCTCCGACGAGGCCAAGTACGTCACCGGGCATAAC
CTCGTCGTCGACGGCGGGTTCACCGTCGGGAAGCGGCTCAACGTGGCGCGTGCTTGA

Peptide Sequence

PEP ID

Os07t0664400-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:28053814:28056606:1 gene:Os07g0664400 transcript:Os07t0664400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Short-chain dehydrogenase/reductase SDR domain containing protein. (Os07t0664400-01)
Sequence

MYSAIHLVQRGKNRAGLTMLTGFVNSFSSVSRPERLAGKVAVITGGASGIGEATAKEFIR
NGAKVIIADVQDDLGHTVAAELGPGSAYTRCDVTDEAQIAATVDLAVARHGHLDILYNNA
GITSSSVGHLASLDLADFDRVMAVNARAVLAGIKHAARVMAPRRTGSILCTASVAGMMGG
EMPHAYNVSKAAVIGVVRSAAGELARHGVRLNAISPLGIATPLAMRGFGDMLAWADAERV
RRLIEEDMNELEGATLEAEDIARAAVYLASDEAKYVTGHNLVVDGGFTVGKRLNVARA

Transcript Sequence

Transcript ID

Os07t0664400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:28053814:28056606:1 gene:Os07g0664400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Short-chain dehydrogenase/reductase SDR domain containing protein. (Os07t0664400-01)
Sequence

AAGGAGAAGCACACCACACCTGAATACTTGAGGTTTGAGGAGGGCAGCTGAAGAGCAAGG
CAGGATGTACAGCGCCATTCACCTCGTTCAGAGGGGCAAGAACAGAGCAGGGTTGACGAT
GTTGACTGGATTCGTCAACAGTTTCTCCTCTGTGTCAAGACCCGAAAGGTTGGCTGGAAA
GGTGGCCGTGATCACCGGTGGCGCAAGCGGCATCGGCGAGGCGACGGCCAAGGAGTTCAT
CCGCAATGGCGCCAAGGTCATCATCGCCGACGTACAAGACGATCTCGGCCACACCGTCGC
TGCCGAGCTCGGCCCGGGCTCGGCCTACACCCGCTGCGACGTCACCGACGAGGCGCAGAT
CGCGGCGACCGTGGACCTTGCCGTGGCGCGCCACGGCCACCTTGACATCCTGTACAACAA
CGCCGGGATCACAAGCTCCTCTGTGGGGCACCTTGCCTCCCTCGACCTCGCCGACTTCGA
CCGCGTCATGGCGGTGAACGCCCGGGCGGTGCTCGCCGGCATCAAGCACGCCGCGCGCGT
GATGGCACCACGACGCACCGGCTCCATCCTCTGCACGGCCAGCGTGGCGGGCATGATGGG
CGGCGAGATGCCCCACGCGTACAACGTCTCCAAGGCGGCGGTCATAGGTGTGGTGCGGTC
CGCCGCCGGCGAGCTGGCACGCCACGGCGTGCGGCTGAACGCGATCTCGCCGCTCGGCAT
CGCGACGCCACTGGCGATGCGCGGGTTCGGCGACATGCTGGCGTGGGCGGACGCCGAGCG
GGTGAGGCGGCTCATCGAGGAGGACATGAACGAGCTAGAGGGCGCGACGCTGGAGGCGGA
GGACATCGCGAGGGCGGCGGTGTACCTCGCCTCCGACGAGGCCAAGTACGTCACCGGGCA
TAACCTCGTCGTCGACGGCGGGTTCACCGTCGGGAAGCGGCTCAACGTGGCGCGTGCTTG
AGTTTAGAAAATCAGAAAATTTAATTTCCATGTGGACTTTGTTTTATTTGATTAATAATT
CAGAGTTTATGTATTGATTACCAGTTTGTTGTTTAGATTTGGTAATAGGGAAATAAGGAT
AATCTTAATCCAGAAACTATCAATTAGTTTTTATACTCGACATGTCATAAAAATCATATA
TAGAAATATGTACCTAATAGGTGCTTTCTTTAAAATAAATTATTATTCAATT