Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0662700-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:27948928:27950606:1 gene:Os07g0662700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0662700-01)
Sequence	ATGAGGCCATCTCGTCTGAACCAGCACTCCTTCCTCTTCCTCCTCCGAGAGGCCTCCGCC TCCGCCGCCGCGCGCCGCCGCCTCCCTCCCCTCCACGCTCTCCTCGTCAAGCTCGGCCTC CAGCCCTACGCGCGCGTGCACAATGCCCTCATCCAGGCGTACGCCGCCTCGGGCCTCGTC GACGACGCCCGCAGGGTGTTCGACGGAATGTCCCACCGGGACACCGTCTCGTTCAACTCC ATGATCCACGCCCACGCCATGTCCGGCGACGTCGTCTCGGCGCGCCGGCTGTTCGAGCGT GTCCCGTCGCCGACACCCGTCACGTGGACGTCGATGGTCGCGGGGCTCTGCCGCGCCGGG GACGTCGCCGCGGCGAGGCGCCTGTTCGAGGAGATGCCGGTGAGGGACCTGGTTTCCTGG AACGCCATGATGTCCGGGCTCGCCGGGAACAGGCGGCCCGTGGAGGCGCTGTGCCTCTTC CGCCGGATGATGGCGGAGGGCTTCGCGCCGAACCGCGGGACGGTCCTCAGCGCGCTGGCG GCGTGCGCGGGCGCCGGCGCGCTGGAGACGGGGAAGTGGATCCACGCCTTCGTCGAGAGG AAGAGGCTCTTCCGGTGGTGGGATGAGTTCCTCGGCACTGCGCTGCTCGACATGTATGCC AAGTGCGGCGCCGTGGAGCTTGCTCTGGATGTGTTCACCAAGTTGAGATCGAGGAACACT TGCACATGGAACGCCATGATCAATGGCTTGGCCATGAATGGCTACTCAGCAAAAGCATTG GACATGTTTCGCAAGATGGAGCTTGACAGAACAGTGGTGCCGGATGAAGTGACCTTTGTA GGAGTCCTACTAGCTTGCAGCCATGGTGGATTTGTGGATGTAGGGAGGGAGCATTTCCAC ATGATTGAGAAGAAGTATGGCATAAGGTTAATCCTTGAGCATTATGCATGCATGGTTGAT CTCCTTGCTCGCTCCGGTCATCTGCAGGAAGCCCACAAAATCATTGCAGGAATGCCGATG AAACCCGATGCTGTCGTTTGGAGGGCATTGCTCGGTGGATGCCGTCTCCACAAGGATGTC AAGATGGCTGAAACTGCAATATCTGAGATGGAAGCAACTTGTAGTGGTGATCATGTCCTC CTGTCAAATCTCTATGCTGCAGTTGGGAGATGGAGTGGTGTTGAAGATGTCCGGAGGACC ATGAGAAGCAAGGGGATTGAGAAGATTCCTGGCTGCAGCTCAATTGAGATAAATGACTCC ATCCATGAGTTCGTCTCAGGTGACAAGTCACACCCATCATATAATGACATTCATGCAAAG CTGGCTGAGATTAGCGCAAGGATGCAACAACAAGGTTATGTCACAGAGACTGCAGAGGTG TTTTATGATGTTGAGGAGGAAGAGAAAGAACAGGCACTCGGTCATCACAGCGAGAAGCTT GCAATTGCATTTGGGCTCATTGGAGGCCCTCCAAATGTAGCAATCAGAATCGTAAAGAAT CTTCGCTTTTGTGCAGATTGCCACAAGTTTGCCAAGTTAGTGTCCCAGATCTATCATTGG GAGATTGTGGTTCGGGATAGAGCCAGATTCCATCATTTTACAGAGGGAGCCTGCTCTTGC AATGATTTTTGGTAG

Peptide Sequence

PEP ID	Os07t0662700-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:27948928:27950606:1 gene:Os07g0662700 transcript:Os07t0662700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0662700-01)
Sequence	MRPSRLNQHSFLFLLREASASAAARRRLPPLHALLVKLGLQPYARVHNALIQAYAASGLV DDARRVFDGMSHRDTVSFNSMIHAHAMSGDVVSARRLFERVPSPTPVTWTSMVAGLCRAG DVAAARRLFEEMPVRDLVSWNAMMSGLAGNRRPVEALCLFRRMMAEGFAPNRGTVLSALA ACAGAGALETGKWIHAFVERKRLFRWWDEFLGTALLDMYAKCGAVELALDVFTKLRSRNT CTWNAMINGLAMNGYSAKALDMFRKMELDRTVVPDEVTFVGVLLACSHGGFVDVGREHFH MIEKKYGIRLILEHYACMVDLLARSGHLQEAHKIIAGMPMKPDAVVWRALLGGCRLHKDV KMAETAISEMEATCSGDHVLLSNLYAAVGRWSGVEDVRRTMRSKGIEKIPGCSSIEINDS IHEFVSGDKSHPSYNDIHAKLAEISARMQQQGYVTETAEVFYDVEEEEKEQALGHHSEKL AIAFGLIGGPPNVAIRIVKNLRFCADCHKFAKLVSQIYHWEIVVRDRARFHHFTEGACSC NDFW

Transcript Sequence

Transcript ID	Os07t0662700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:27948928:27950606:1 gene:Os07g0662700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0662700-01)
Sequence	GTATGAGGCCATCTCGTCTGAACCAGCACTCCTTCCTCTTCCTCCTCCGAGAGGCCTCCG CCTCCGCCGCCGCGCGCCGCCGCCTCCCTCCCCTCCACGCTCTCCTCGTCAAGCTCGGCC TCCAGCCCTACGCGCGCGTGCACAATGCCCTCATCCAGGCGTACGCCGCCTCGGGCCTCG TCGACGACGCCCGCAGGGTGTTCGACGGAATGTCCCACCGGGACACCGTCTCGTTCAACT CCATGATCCACGCCCACGCCATGTCCGGCGACGTCGTCTCGGCGCGCCGGCTGTTCGAGC GTGTCCCGTCGCCGACACCCGTCACGTGGACGTCGATGGTCGCGGGGCTCTGCCGCGCCG GGGACGTCGCCGCGGCGAGGCGCCTGTTCGAGGAGATGCCGGTGAGGGACCTGGTTTCCT GGAACGCCATGATGTCCGGGCTCGCCGGGAACAGGCGGCCCGTGGAGGCGCTGTGCCTCT TCCGCCGGATGATGGCGGAGGGCTTCGCGCCGAACCGCGGGACGGTCCTCAGCGCGCTGG CGGCGTGCGCGGGCGCCGGCGCGCTGGAGACGGGGAAGTGGATCCACGCCTTCGTCGAGA GGAAGAGGCTCTTCCGGTGGTGGGATGAGTTCCTCGGCACTGCGCTGCTCGACATGTATG CCAAGTGCGGCGCCGTGGAGCTTGCTCTGGATGTGTTCACCAAGTTGAGATCGAGGAACA CTTGCACATGGAACGCCATGATCAATGGCTTGGCCATGAATGGCTACTCAGCAAAAGCAT TGGACATGTTTCGCAAGATGGAGCTTGACAGAACAGTGGTGCCGGATGAAGTGACCTTTG TAGGAGTCCTACTAGCTTGCAGCCATGGTGGATTTGTGGATGTAGGGAGGGAGCATTTCC ACATGATTGAGAAGAAGTATGGCATAAGGTTAATCCTTGAGCATTATGCATGCATGGTTG ATCTCCTTGCTCGCTCCGGTCATCTGCAGGAAGCCCACAAAATCATTGCAGGAATGCCGA TGAAACCCGATGCTGTCGTTTGGAGGGCATTGCTCGGTGGATGCCGTCTCCACAAGGATG TCAAGATGGCTGAAACTGCAATATCTGAGATGGAAGCAACTTGTAGTGGTGATCATGTCC TCCTGTCAAATCTCTATGCTGCAGTTGGGAGATGGAGTGGTGTTGAAGATGTCCGGAGGA CCATGAGAAGCAAGGGGATTGAGAAGATTCCTGGCTGCAGCTCAATTGAGATAAATGACT CCATCCATGAGTTCGTCTCAGGTGACAAGTCACACCCATCATATAATGACATTCATGCAA AGCTGGCTGAGATTAGCGCAAGGATGCAACAACAAGGTTATGTCACAGAGACTGCAGAGG TGTTTTATGATGTTGAGGAGGAAGAGAAAGAACAGGCACTCGGTCATCACAGCGAGAAGC TTGCAATTGCATTTGGGCTCATTGGAGGCCCTCCAAATGTAGCAATCAGAATCGTAAAGA ATCTTCGCTTTTGTGCAGATTGCCACAAGTTTGCCAAGTTAGTGTCCCAGATCTATCATT GGGAGATTGTGGTTCGGGATAGAGCCAGATTCCATCATTTTACAGAGGGAGCCTGCTCTT GCAATGATTTTTGGTAGTAGAGAAATCTGGAATAGTGGCATAAAGTATGCTTTCTTGTC