Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0661100-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:27868843:27876572:-1 gene:Os07g0661100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl transferase, family 4 protein. (Os07t0661100-01)
Sequence

ATGGACGCCCGCCGCAGGCCCGCGGCGACGGCGGCGGCGGCGGCGGCGGCACCCGCTGAT
GCGCAGCCGCGGGCGAGGCCGGCTGCTGCGGTGGCGGCGGCGGAGGCCGCGGATGCTGAG
CTGGTGCTCCGGGCGCCGAACCTGCGCGTGGTCGCCGCGGCGATGGTGGCCTTCCTCGCG
CCCTTCTCGTACCTTGCGTTCGTGCACTACCCGCTGGACGCGGCGCTGCGGCGATCCATC
CTCATCTGCGGGGCCATGAGCTTCGGCGGCTTCGTCGTCGTGCTCCGCCTCGTCCCCGTC
GCCGCACGCTACCTCCTCCGTCGCGGGATGTGGGGGAAGGACATCAACAAGCGCGGCTTG
CCCATGGGCGAGATCAGAGTGCCTGAGGCACTTGGCATTGTTGTTGGGATTGTCTACTTG
GTCATTGCTATTCTATTTCAACATTTCAACTTCACAGCAGACTCTATGTGGCTTGTTGAA
TACAACGCGGCACTAGCATCAGTCTGCTTTATGGTGCTTCTTGGATTTATTGATGATGTT
CTTGATGTTCCATGGAGAGTGAAACTTCTACTACCCACAATTGCAGCACTTCCTTTGCTG
ATGGCATATGCTGGTGGTACTTCCGTCAGCATTCCAAAGCCTCTAACATCTTATGTTGGA
GTAGCTGTTCTGGAGCTAGGTTCTCTGTACAAGCTCTTTATGCTCCTATTAGCAGTCTTT
TGTACAAATTCGATCAATATACATGCTGGCCTGAATGGTCTTGAAGTTGGGCAGACAGTT
ATTATATCTGCTGCGGTTTTGATACATAATGTAATGCGCATAGGATCTTCTACGGACATT
GAAGCGCAACAAGCCCATGCATTCTCGATTTATCTTGTCCTGCCTTTCTTGACCACTTCA
TTAGCTTTGCTCGCATTTAACTGGTATCCTTCATCTGTTTTCGTTGGTGATACCTACACC
TATTTTTCTGGAATGGCATTGGCTGTGGTGGGAATTTTGGGTCATTTCAGCGAGACATTA
TTGCTCTTCTTTTTACCTGAGGTTCTTAACTTTCTGTGCTCAGTCCCACAGCTGTTTAAG
TTTGTTCCCTGCCCAAGGCACAGGTTGCCAAGGTTTGATCCCCACACAGGACTGTTGACG
GGTACCAAAGATGGTAACTTGGTAAACATATTCCTTAGGATATTTGGAAGATGCACAGAG
AGGACCCTTTGCATAAGGCTGCTCATATTTCAGGCGTTGTCATGCCTATTCTGCTTTTGG
CTGAGGTACATGATTACTGGATGGTACAAATGA

Peptide Sequence

PEP ID

Os07t0661100-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:27868843:27876572:-1 gene:Os07g0661100 transcript:Os07t0661100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl transferase, family 4 protein. (Os07t0661100-01)
Sequence

MDARRRPAATAAAAAAAPADAQPRARPAAAVAAAEAADAELVLRAPNLRVVAAAMVAFLA
PFSYLAFVHYPLDAALRRSILICGAMSFGGFVVVLRLVPVAARYLLRRGMWGKDINKRGL
PMGEIRVPEALGIVVGIVYLVIAILFQHFNFTADSMWLVEYNAALASVCFMVLLGFIDDV
LDVPWRVKLLLPTIAALPLLMAYAGGTSVSIPKPLTSYVGVAVLELGSLYKLFMLLLAVF
CTNSINIHAGLNGLEVGQTVIISAAVLIHNVMRIGSSTDIEAQQAHAFSIYLVLPFLTTS
LALLAFNWYPSSVFVGDTYTYFSGMALAVVGILGHFSETLLLFFLPEVLNFLCSVPQLFK
FVPCPRHRLPRFDPHTGLLTGTKDGNLVNIFLRIFGRCTERTLCIRLLIFQALSCLFCFW
LRYMITGWYK

Transcript Sequence

Transcript ID

Os07t0661100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:27868843:27876572:-1 gene:Os07g0661100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl transferase, family 4 protein. (Os07t0661100-01)
Sequence

GCCGGCGACCAAACCCCCGCCACCGCCGCCGCACCAGCCGACTCGCCGGAGAAGCTCTGC
CGAAACCCTAGCACTCCCCTCCTAGTCTCCCATGGACGCCCGCCGCAGGCCCGCGGCGAC
GGCGGCGGCGGCGGCGGCGGCACCCGCTGATGCGCAGCCGCGGGCGAGGCCGGCTGCTGC
GGTGGCGGCGGCGGAGGCCGCGGATGCTGAGCTGGTGCTCCGGGCGCCGAACCTGCGCGT
GGTCGCCGCGGCGATGGTGGCCTTCCTCGCGCCCTTCTCGTACCTTGCGTTCGTGCACTA
CCCGCTGGACGCGGCGCTGCGGCGATCCATCCTCATCTGCGGGGCCATGAGCTTCGGCGG
CTTCGTCGTCGTGCTCCGCCTCGTCCCCGTCGCCGCACGCTACCTCCTCCGTCGCGGGAT
GTGGGGGAAGGACATCAACAAGCGCGGCTTGCCCATGGGCGAGATCAGAGTGCCTGAGGC
ACTTGGCATTGTTGTTGGGATTGTCTACTTGGTCATTGCTATTCTATTTCAACATTTCAA
CTTCACAGCAGACTCTATGTGGCTTGTTGAATACAACGCGGCACTAGCATCAGTCTGCTT
TATGGTGCTTCTTGGATTTATTGATGATGTTCTTGATGTTCCATGGAGAGTGAAACTTCT
ACTACCCACAATTGCAGCACTTCCTTTGCTGATGGCATATGCTGGTGGTACTTCCGTCAG
CATTCCAAAGCCTCTAACATCTTATGTTGGAGTAGCTGTTCTGGAGCTAGGTTCTCTGTA
CAAGCTCTTTATGCTCCTATTAGCAGTCTTTTGTACAAATTCGATCAATATACATGCTGG
CCTGAATGGTCTTGAAGTTGGGCAGACAGTTATTATATCTGCTGCGGTTTTGATACATAA
TGTAATGCGCATAGGATCTTCTACGGACATTGAAGCGCAACAAGCCCATGCATTCTCGAT
TTATCTTGTCCTGCCTTTCTTGACCACTTCATTAGCTTTGCTCGCATTTAACTGGTATCC
TTCATCTGTTTTCGTTGGTGATACCTACACCTATTTTTCTGGAATGGCATTGGCTGTGGT
GGGAATTTTGGGTCATTTCAGCGAGACATTATTGCTCTTCTTTTTACCTGAGGTTCTTAA
CTTTCTGTGCTCAGTCCCACAGCTGTTTAAGTTTGTTCCCTGCCCAAGGCACAGGTTGCC
AAGGTTTGATCCCCACACAGGACTGTTGACGGGTACCAAAGATGGTAACTTGGTAAACAT
ATTCCTTAGGATATTTGGAAGATGCACAGAGAGGACCCTTTGCATAAGGCTGCTCATATT
TCAGGCGTTGTCATGCCTATTCTGCTTTTGGCTGAGGTACATGATTACTGGATGGTACAA
ATGATCACCTGGACAGGATGCCGCGGCAATCAAAATCTGTTATTACCTGACAGCTGTTCT
CTCTCGGCAATATTTGTAGACTAGCAGTAAACAACCAACCTAAATCTTCCAAATAGGAGT
AGCTGATGCAAGAACACCTTACTTACTGTCCACAATTTTTTAAATTTTCTCATGACTTAG
CATTTGCATCTAGTTTGTGTCAAGCCTTCGGGGTTTTGGAGTTCGTACCTTTTTTTTTTG
TACAAAACAACTACATGAGATCTGAGGTGTGGCCTTATGAGGTTGCTACGATAGAGTTCC
TGAAGCTTTTGATCGAAACAAGACTTGTATTTTTGCAAACAGTTTCTTCAAGGAACTTGC
TTGCGCTACTCTTCTGAAAAATCATTACCGCCTTGTGCGACATTAGTAGCGGAAGCGTTT
AAAGACTCCATCCTTTGTTTTGTGTAGTTTTAAAATTCCAGCTCAATGTTTCAATTCAAT
CAAATACAAACTTCAAATCA