Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0659800-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:27807792:27811531:1 gene:Os07g0659800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia homolog 5). Splice isoform 2. (Os07t0659800-01)
Sequence	ATGGCATCAGTTACTTATCTTGATGATGCCCATTCTGAAGTTATCGATCCTCCAAAGAAC GAGGAGATGCTGGATGTTACTGAACTTGTTGATGATCACACCCAGCATTCACCAAAACCG AATGCGATGGTCTCTGGCAATGTGCGTGAGCTACTGGAATGCCCTGTGTGTCTAAATGCC ATGTATCCTCCAATTCATCAGTGCTCCAATGGTCATACTCTATGTTCCGGATGCAAGCCC AGGGTTCACAACCGCTGCCCAACTTGCAGACATGAATTGGGTAACATAAGATGCCTTGCT CTGGAAAAGGTAGCTGCATCACTAGAGCTTCCATGCAAATATCAGAACTTTGGGTGCTTG GGCATATATCCTTATTACTGCAAGCTGAAGCATGAGTCACAGTGCCAATACAGGCCCTAT ACTTGCCCATATGCTGGATCTGAATGCACTGTTGCTGGTGACATTCAGTATCTAGTAAGT CACTTGAAAGATGATCATAAGGTTGACATGCACAACGGAAGCACCTTCAATCACCGTTAT GTCAAATCAAATCCTCATGAAGTTGAGAATGCTACCTGGATGCTCACGGTTTTCAGCTGT TTCGGCCAGTACTTTTGCCTGCACTTTGAGGCATTCCAGTTGGGCATGGCACCTGTCTAC ATCGCCTTCCTACGGTTCATGGGAGATGATGCAGAAGCCAAGAACTATAGCTACAGCCTG GAGGTCGGAGGCAGTGGTCGGAAGATGACCTGGCAAGGCGTCCCCCGAAGCATCAGAGAC AGTCACAGGAAAGTTCGGGACAGCTACGACGGCCTTATCATCCAGCGGAACATGGCCTTG TTCTTCTCCGGTGGCGACAAGAAGGAGCTCAAACTGCGTGTCACCGGAAGGATTTGGAAG GAGCAGTGA

Peptide Sequence

PEP ID	Os07t0659800-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:27807792:27811531:1 gene:Os07g0659800 transcript:Os07t0659800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia homolog 5). Splice isoform 2. (Os07t0659800-01)
Sequence	MASVTYLDDAHSEVIDPPKNEEMLDVTELVDDHTQHSPKPNAMVSGNVRELLECPVCLNA MYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQNFGCL GIYPYYCKLKHESQCQYRPYTCPYAGSECTVAGDIQYLVSHLKDDHKVDMHNGSTFNHRY VKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDAEAKNYSYSL EVGGSGRKMTWQGVPRSIRDSHRKVRDSYDGLIIQRNMALFFSGGDKKELKLRVTGRIWK EQ

Transcript Sequence

Transcript ID	Os07t0659800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:27807792:27811531:1 gene:Os07g0659800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia homolog 5). Splice isoform 2. (Os07t0659800-01)
Sequence	TTTCGAATGCTCCTGACTCCTCCTCGGTTCCTCTTCCTCTCGAGCCCTTCACTGCAGTAG CATCATTCAAGCTGGACCCAAAGCATCCCAGATCAAATCAAACCCGCTGGTTTGGCCTTC CGTTTTGAGGGATTCTATATCTATAGGCTTGTCCATGGCATCAGTTACTTATCTTGATGA TGCCCATTCTGAAGTTATCGATCCTCCAAAGAACGAGGAGATGCTGGATGTTACTGAACT TGTTGATGATCACACCCAGCATTCACCAAAACCGAATGCGATGGTCTCTGGCAATGTGCG TGAGCTACTGGAATGCCCTGTGTGTCTAAATGCCATGTATCCTCCAATTCATCAGTGCTC CAATGGTCATACTCTATGTTCCGGATGCAAGCCCAGGGTTCACAACCGCTGCCCAACTTG CAGACATGAATTGGGTAACATAAGATGCCTTGCTCTGGAAAAGGTAGCTGCATCACTAGA GCTTCCATGCAAATATCAGAACTTTGGGTGCTTGGGCATATATCCTTATTACTGCAAGCT GAAGCATGAGTCACAGTGCCAATACAGGCCCTATACTTGCCCATATGCTGGATCTGAATG CACTGTTGCTGGTGACATTCAGTATCTAGTAAGTCACTTGAAAGATGATCATAAGGTTGA CATGCACAACGGAAGCACCTTCAATCACCGTTATGTCAAATCAAATCCTCATGAAGTTGA GAATGCTACCTGGATGCTCACGGTTTTCAGCTGTTTCGGCCAGTACTTTTGCCTGCACTT TGAGGCATTCCAGTTGGGCATGGCACCTGTCTACATCGCCTTCCTACGGTTCATGGGAGA TGATGCAGAAGCCAAGAACTATAGCTACAGCCTGGAGGTCGGAGGCAGTGGTCGGAAGAT GACCTGGCAAGGCGTCCCCCGAAGCATCAGAGACAGTCACAGGAAAGTTCGGGACAGCTA CGACGGCCTTATCATCCAGCGGAACATGGCCTTGTTCTTCTCCGGTGGCGACAAGAAGGA GCTCAAACTGCGTGTCACCGGAAGGATTTGGAAGGAGCAGTGAATCACAACATCTCTAAC TTCTCGTTGCGACTGTTAGTTTGATTGCGACATGGATCTTGATTCTTGAATTTCCAGGGT GAAATGGGATTAATGCGTAAGCGAATTGCTCCGGGAACTAGCTAGGCAGGACCTTGTAAG ATTGTAGACTGTCTTAGCTACCAGCTGCCATTCTTCTTCTAGTGGTTCAGGAACATTTTG TATGGATGATTGTCTCGTGGCACTGATGTAGTAGAATTGAAGGCAAATCTCTTCTTTGCT CTTAACTTCTCCAAGAATTAGCCAATCTGGCGAATCTTCTGATGGTGACTCTGCCAAATG TAAATGATGTAGCTCTCCCCTTTGTATGATTCAAATCTATGTCAGGCCACCATTGTTTTG CCGGAAATGTACCCCTGCCAAACCTGCATTTGCTCCTACTACTACATGTTCAGCTGTAAA TTTGAACACCTTTTCTCTG