Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0659500-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:27791121:27799497:-1 gene:Os07g0659500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Non-SMC condensin subunit, XCAP-D2/Cnd1 family protein. (Os07t0659500-01)
Sequence	ATGGCGCCGCCCTTCGTCTTCCCCTCGACCCTCCGGGACCTGGAGCGGGACGGAGACGGC GGCGGCGACGACGAGCCGGCCCTCCGCCCGCAGAACCCCGTCGCCGTCGGCGCACTCCGC GCCGCCGACCTCGAGGAGTTCGTCAAAGGCACATCGTTTGACCTGTCTGACAAGGAACTC TTCTGCATCGAGGAGCAGGACGTGTTTGACCGCGTCTATTCCCTCGTGCGTGACTTCACT TGCTTGCCCCCTGCCCTCAAGTTCAACCTTGTTGAGACCTTGCGCTCCAATCTTAGTGTT CTCCTCCCAAACATAGACTCCCTTTCACGAGCTTCCATGTCATCCCCTTCTGATGGGATC CCAGTAACTGATCGCATTGCTTCGCATCGGAATGCCCTTAAGATCTACTCCTTCTTCCTC CTCTCCATTGTTGTTGCTGAAGAATCGGGAGCTGATAGTTGCAATGGCCCTAAGGTGGCA GTACATGGTCGGAAGAAGAATGCTGTATATGCTTGGAATTGGGAAGCACAAAGAGGCCGC ATCATGAATCTTATTGCTAATTCACTTGAAGTTGACCTATCACTATTGTTTGGTCCAGGC GGTGCTGATGAACAATATCTCTCTTTTGTTTCAAAGTGTACTTTTGTTCTCTGTGAGAAC CAGAACGTGCTGAAAGATGAGGAAATAAGAAATGGCTTGTGCCGAATAATTGGTGCAATT GCTACGAAGCATCAAAGAGTATCTCAAACAAGTGCATCTGTCTTGCATTTGATTCATAAA TTTGATTTCACTGTCGTGCTTCTAGCGGAATCAGTTGCTGCTGCAGAGAAAAGGTTTGGT GATGGAAGCCTTGCGATTTTGCTGATAAGGGAAATAGGTCGGACTGACCCAAAAGATTAT GTAAGAGATAGTGCCGGTGCTGACAATGCCGGGAGATTCCTAGTAGAACTTGCAGATCGC TTGCCAAAGCTCATGTCAACCAATATTGGTGTTCTGATACCTCATTTTGGTGGGGAATCA TACAAGATTAGAAATTCTCTTGTTGGGGTCTTGGGCAAGCTGGCTGCAAAGGCCTTCAAA GATGTTGAAGGCGATAGTGACGCCCATTCTTTAAGGCTCCGAAGTAAGCATGCTATGCTG GAAATTTTGCTTGAACGTTGTCGAGATGTGTCTGCATACACGAGGAGTCGTGTGCTTCAG GTATGGGCAGAGCTGTGTGAAGAAAATGCTATTTCAATTGGCCTGTGGAATGAAGTGGCA TCAGTTGCTTCGGGCAGACTGGAGGACAAGAGTGCAATTGTGAGAAAATCAGCACTGCAA TTACTCATCACAATGCTGCAGCACAATCCTTTTGGGCCTCAACTAAGGACTGCAACCTTT GAGGCAACTCTAGAAAGGTACAAGGAGAAATTGCAAGGAATGGAGCCTCCTTCTCCCGAG AAGGATGAGCTCTTGAATGATTCTTCACTGGGTGAAGTGATTGCAGGGCAGGATGAAAGT GTCAGTGATAGCTGTTTACCTTCTAGTCAAGACCCAAAGGATCAAGATCCCACAATTGTG GATATAACAAACTTGGAACAGATTAGAGCTTTAGTTGCATCACTTGAGGCTGGTCTGAGA TTCTCGGCATGTATAACTTCATTAATGCCAACTCTTGTCCAGTTGTTGGCATCGTCTTCA GCCACTGATGTTGAGAACACAATTCTTCTATTAATGAGATGCAGACAATTTCAGATTGAA GGTTCGGAAGAAGCCCTCCGGAAAATGTTACCTCTGGTATTTTCTCAGGATAAGTCAATA TATGAAGCTGTGGAGAGTGCATTCATCACTATATACACAAAGAAAAGTCCCACGGAAACA GCCAAAAGTTTATTAAACCTTACCATTGAATGCAGCATTGGTGACCTTGCTGCCCTTGAA AGCTTAGTTAGTTCATTGGTATCAAAAGGAGAAATTTCATCCAACACGATAACAGCCCTG TGGGATTATTTTTGCTTTCACATCAATGGTGTGAAACCAGTGCAAAGCCGTGGAGCTTTA TCGATTCTTTGCATGGCAGCAAAGTCATCTCCCAGCATTTTGGGTACTCATTTGCAAGAT ATTATTGATATTGGGTTTGGACGCTGGGCTAAGGAGGAGCCTCTGCTTGCTAGAACTGCA TGCATTGCCCTGCAAAGATTATCCAATGAAGACAAAGTCAAATTAATTAGTACTGGTAGT AGGGTATTCGCTGCATTGCAAGGCCTGATAACTAGCCTCTCACTTCCTGAGAAAATATGG TATGGAGCCGCAGATAAAGCTATAAGTGCCATCTACGCTTTACACCCAGCACCTGAAATC TTCGCTGCTCAGATTGTAAAGAAATCACTTAATTCTGTATTCGGTGTCTTAGGAACTGAT TGCATGTCAAATGAAAATGAAACTCAGAATGGTTCCATGCTGTCATCGACACCAGCCACA AATCTGGGCAGATTTCTTTTCATTATTAGTCATATAGCACTGAATCATTTGGTTTACATT GAGACTTCTGTTAAGAAAATTCAGAAACAGAAACGGAAGAATGACAAATCAGAGCCTACT GCCGAGGATCTTCAGGCAGATGCCTCCAAAAATTCGGAGGCACAAGGTATAAATGCTGAG TTGGGAATTGGTGCATCTGTAGATATTGCAATAGAGTCCCTCGCTGAAAAGGCAGAAAGG GAGATTGTGTCCAATTCTGAAAAGAATCTTATTGGATACTGTGCACCATTTCTCGCAAAA CTCTGCAGGAACCTGGCTTTGCTTCAAAAGTTTCCAGGGTTACAGGCCTCTGCAATGCTT GCTCTTTGCAAGCTAATGATTATTGATGCAGAATTCTGTGAAGCAAATCTTCAGATCCTA TTTACTGCTGCTGAGAGCGCGCCTTCTGAAGTTGTCCGATCAAACTGCACTATAGCTCTT GGTGATTTAGTGGTTCGCTTTCCAAACCTCTTAGAACCTTGGACAGAGCACATATATGCA CGCTTACGTGATCCTTCGGCATCTGTGAGGAAGAACACTGTGCTTGTCATTTCACATCTT ATATTGAATGATATGATGAAGGTTAAAGGCTTTATTAATGAAATGGCCGTAAGGATAGAA GATGAAGACGAGAGGATCTCAAGCCTTGCAAAACTCTTCTTTCATGAGTTATCAAAGAAA GGCATCAATCCAATTTATAATCTTCTTCCGGATATCCTGGGTAGATTGTGCAATCAACAA CTCAAGGATGAAACGTTCTGCAGCATTATGCAATTCTTGATCAGCTCTATTAAAAAGGAC AAACAAATGGAAGCTCTTGTGGATAAGCTCTGCAATAGATTTGCTGGTGTAAATGATGTT AGACAGTGGGAGTATATATCCTATTGCCTTTCTCAGCTGACTTTCACAGAGAAGGGTTTG AAAAAACTAGTTGATAATTTCAAGATATTTGAGCATGCATTATCTGAAGATTCTGTAATG AACCACTTCAGAACTGTGATAGCAAAGTGCAAGAAGTTTGCCAAGCCAGATCTCAAAGTT TGCATTGAGGAATTTGATGAGAAACTCAGCAAGGTTCATCAGGAAAAGAAAGAGCAAGAG GCCACGACCAGGAATGCCGAGGCACACAAACAAAGAATTGGTTCACTTGACAAACTCATG GTAACTAAGAGAACTGGGAAGGATAAGGGAAAATCTGCTGAAGTGGCAGAGGAAACTAGT GAGGTAGTTGATCCATCAACGGAGAGCAATTCTGAAGATAAGGAGAACATGCCAGAATGC AGTGACAATATTTGTTCGGAAAAGAGTCATACATCATCCACGTTTACAGAATCAGACGGT GACAGCACAGAGGTTCAATCAGCGAGAACTTCTTGCAAAGGCGTGTCGCGTTCAAGGATA AATAAAATGAGAGAACCGGAAGACTCAGAAGACAGTGCTCCAATGAGACGTGTGTCTCGC AGAAGACCAGTTAGGTGA

Peptide Sequence

PEP ID	Os07t0659500-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:27791121:27799497:-1 gene:Os07g0659500 transcript:Os07t0659500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Non-SMC condensin subunit, XCAP-D2/Cnd1 family protein. (Os07t0659500-01)
Sequence	MAPPFVFPSTLRDLERDGDGGGDDEPALRPQNPVAVGALRAADLEEFVKGTSFDLSDKEL FCIEEQDVFDRVYSLVRDFTCLPPALKFNLVETLRSNLSVLLPNIDSLSRASMSSPSDGI PVTDRIASHRNALKIYSFFLLSIVVAEESGADSCNGPKVAVHGRKKNAVYAWNWEAQRGR IMNLIANSLEVDLSLLFGPGGADEQYLSFVSKCTFVLCENQNVLKDEEIRNGLCRIIGAI ATKHQRVSQTSASVLHLIHKFDFTVVLLAESVAAAEKRFGDGSLAILLIREIGRTDPKDY VRDSAGADNAGRFLVELADRLPKLMSTNIGVLIPHFGGESYKIRNSLVGVLGKLAAKAFK DVEGDSDAHSLRLRSKHAMLEILLERCRDVSAYTRSRVLQVWAELCEENAISIGLWNEVA SVASGRLEDKSAIVRKSALQLLITMLQHNPFGPQLRTATFEATLERYKEKLQGMEPPSPE KDELLNDSSLGEVIAGQDESVSDSCLPSSQDPKDQDPTIVDITNLEQIRALVASLEAGLR FSACITSLMPTLVQLLASSSATDVENTILLLMRCRQFQIEGSEEALRKMLPLVFSQDKSI YEAVESAFITIYTKKSPTETAKSLLNLTIECSIGDLAALESLVSSLVSKGEISSNTITAL WDYFCFHINGVKPVQSRGALSILCMAAKSSPSILGTHLQDIIDIGFGRWAKEEPLLARTA CIALQRLSNEDKVKLISTGSRVFAALQGLITSLSLPEKIWYGAADKAISAIYALHPAPEI FAAQIVKKSLNSVFGVLGTDCMSNENETQNGSMLSSTPATNLGRFLFIISHIALNHLVYI ETSVKKIQKQKRKNDKSEPTAEDLQADASKNSEAQGINAELGIGASVDIAIESLAEKAER EIVSNSEKNLIGYCAPFLAKLCRNLALLQKFPGLQASAMLALCKLMIIDAEFCEANLQIL FTAAESAPSEVVRSNCTIALGDLVVRFPNLLEPWTEHIYARLRDPSASVRKNTVLVISHL ILNDMMKVKGFINEMAVRIEDEDERISSLAKLFFHELSKKGINPIYNLLPDILGRLCNQQ LKDETFCSIMQFLISSIKKDKQMEALVDKLCNRFAGVNDVRQWEYISYCLSQLTFTEKGL KKLVDNFKIFEHALSEDSVMNHFRTVIAKCKKFAKPDLKVCIEEFDEKLSKVHQEKKEQE ATTRNAEAHKQRIGSLDKLMVTKRTGKDKGKSAEVAEETSEVVDPSTESNSEDKENMPEC SDNICSEKSHTSSTFTESDGDSTEVQSARTSCKGVSRSRINKMREPEDSEDSAPMRRVSR RRPVR

Transcript Sequence

Transcript ID	Os07t0659500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:27791121:27799497:-1 gene:Os07g0659500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Non-SMC condensin subunit, XCAP-D2/Cnd1 family protein. (Os07t0659500-01)
Sequence	ATTCCCCCATCCTTCTCTCTCTCCACCTAAGGCTCGAATCGAAGCCGACCTCCTCCTCCG CTCGCCGCCGCCGCCGGCGTCGTCCGCGGCGAGATGGCGCCGCCCTTCGTCTTCCCCTCG ACCCTCCGGGACCTGGAGCGGGACGGAGACGGCGGCGGCGACGACGAGCCGGCCCTCCGC CCGCAGAACCCCGTCGCCGTCGGCGCACTCCGCGCCGCCGACCTCGAGGAGTTCGTCAAA GGCACATCGTTTGACCTGTCTGACAAGGAACTCTTCTGCATCGAGGAGCAGGACGTGTTT GACCGCGTCTATTCCCTCGTGCGTGACTTCACTTGCTTGCCCCCTGCCCTCAAGTTCAAC CTTGTTGAGACCTTGCGCTCCAATCTTAGTGTTCTCCTCCCAAACATAGACTCCCTTTCA CGAGCTTCCATGTCATCCCCTTCTGATGGGATCCCAGTAACTGATCGCATTGCTTCGCAT CGGAATGCCCTTAAGATCTACTCCTTCTTCCTCCTCTCCATTGTTGTTGCTGAAGAATCG GGAGCTGATAGTTGCAATGGCCCTAAGGTGGCAGTACATGGTCGGAAGAAGAATGCTGTA TATGCTTGGAATTGGGAAGCACAAAGAGGCCGCATCATGAATCTTATTGCTAATTCACTT GAAGTTGACCTATCACTATTGTTTGGTCCAGGCGGTGCTGATGAACAATATCTCTCTTTT GTTTCAAAGTGTACTTTTGTTCTCTGTGAGAACCAGAACGTGCTGAAAGATGAGGAAATA AGAAATGGCTTGTGCCGAATAATTGGTGCAATTGCTACGAAGCATCAAAGAGTATCTCAA ACAAGTGCATCTGTCTTGCATTTGATTCATAAATTTGATTTCACTGTCGTGCTTCTAGCG GAATCAGTTGCTGCTGCAGAGAAAAGGTTTGGTGATGGAAGCCTTGCGATTTTGCTGATA AGGGAAATAGGTCGGACTGACCCAAAAGATTATGTAAGAGATAGTGCCGGTGCTGACAAT GCCGGGAGATTCCTAGTAGAACTTGCAGATCGCTTGCCAAAGCTCATGTCAACCAATATT GGTGTTCTGATACCTCATTTTGGTGGGGAATCATACAAGATTAGAAATTCTCTTGTTGGG GTCTTGGGCAAGCTGGCTGCAAAGGCCTTCAAAGATGTTGAAGGCGATAGTGACGCCCAT TCTTTAAGGCTCCGAAGTAAGCATGCTATGCTGGAAATTTTGCTTGAACGTTGTCGAGAT GTGTCTGCATACACGAGGAGTCGTGTGCTTCAGGTATGGGCAGAGCTGTGTGAAGAAAAT GCTATTTCAATTGGCCTGTGGAATGAAGTGGCATCAGTTGCTTCGGGCAGACTGGAGGAC AAGAGTGCAATTGTGAGAAAATCAGCACTGCAATTACTCATCACAATGCTGCAGCACAAT CCTTTTGGGCCTCAACTAAGGACTGCAACCTTTGAGGCAACTCTAGAAAGGTACAAGGAG AAATTGCAAGGAATGGAGCCTCCTTCTCCCGAGAAGGATGAGCTCTTGAATGATTCTTCA CTGGGTGAAGTGATTGCAGGGCAGGATGAAAGTGTCAGTGATAGCTGTTTACCTTCTAGT CAAGACCCAAAGGATCAAGATCCCACAATTGTGGATATAACAAACTTGGAACAGATTAGA GCTTTAGTTGCATCACTTGAGGCTGGTCTGAGATTCTCGGCATGTATAACTTCATTAATG CCAACTCTTGTCCAGTTGTTGGCATCGTCTTCAGCCACTGATGTTGAGAACACAATTCTT CTATTAATGAGATGCAGACAATTTCAGATTGAAGGTTCGGAAGAAGCCCTCCGGAAAATG TTACCTCTGGTATTTTCTCAGGATAAGTCAATATATGAAGCTGTGGAGAGTGCATTCATC ACTATATACACAAAGAAAAGTCCCACGGAAACAGCCAAAAGTTTATTAAACCTTACCATT GAATGCAGCATTGGTGACCTTGCTGCCCTTGAAAGCTTAGTTAGTTCATTGGTATCAAAA GGAGAAATTTCATCCAACACGATAACAGCCCTGTGGGATTATTTTTGCTTTCACATCAAT GGTGTGAAACCAGTGCAAAGCCGTGGAGCTTTATCGATTCTTTGCATGGCAGCAAAGTCA TCTCCCAGCATTTTGGGTACTCATTTGCAAGATATTATTGATATTGGGTTTGGACGCTGG GCTAAGGAGGAGCCTCTGCTTGCTAGAACTGCATGCATTGCCCTGCAAAGATTATCCAAT GAAGACAAAGTCAAATTAATTAGTACTGGTAGTAGGGTATTCGCTGCATTGCAAGGCCTG ATAACTAGCCTCTCACTTCCTGAGAAAATATGGTATGGAGCCGCAGATAAAGCTATAAGT GCCATCTACGCTTTACACCCAGCACCTGAAATCTTCGCTGCTCAGATTGTAAAGAAATCA CTTAATTCTGTATTCGGTGTCTTAGGAACTGATTGCATGTCAAATGAAAATGAAACTCAG AATGGTTCCATGCTGTCATCGACACCAGCCACAAATCTGGGCAGATTTCTTTTCATTATT AGTCATATAGCACTGAATCATTTGGTTTACATTGAGACTTCTGTTAAGAAAATTCAGAAA CAGAAACGGAAGAATGACAAATCAGAGCCTACTGCCGAGGATCTTCAGGCAGATGCCTCC AAAAATTCGGAGGCACAAGGTATAAATGCTGAGTTGGGAATTGGTGCATCTGTAGATATT GCAATAGAGTCCCTCGCTGAAAAGGCAGAAAGGGAGATTGTGTCCAATTCTGAAAAGAAT CTTATTGGATACTGTGCACCATTTCTCGCAAAACTCTGCAGGAACCTGGCTTTGCTTCAA AAGTTTCCAGGGTTACAGGCCTCTGCAATGCTTGCTCTTTGCAAGCTAATGATTATTGAT GCAGAATTCTGTGAAGCAAATCTTCAGATCCTATTTACTGCTGCTGAGAGCGCGCCTTCT GAAGTTGTCCGATCAAACTGCACTATAGCTCTTGGTGATTTAGTGGTTCGCTTTCCAAAC CTCTTAGAACCTTGGACAGAGCACATATATGCACGCTTACGTGATCCTTCGGCATCTGTG AGGAAGAACACTGTGCTTGTCATTTCACATCTTATATTGAATGATATGATGAAGGTTAAA GGCTTTATTAATGAAATGGCCGTAAGGATAGAAGATGAAGACGAGAGGATCTCAAGCCTT GCAAAACTCTTCTTTCATGAGTTATCAAAGAAAGGCATCAATCCAATTTATAATCTTCTT CCGGATATCCTGGGTAGATTGTGCAATCAACAACTCAAGGATGAAACGTTCTGCAGCATT ATGCAATTCTTGATCAGCTCTATTAAAAAGGACAAACAAATGGAAGCTCTTGTGGATAAG CTCTGCAATAGATTTGCTGGTGTAAATGATGTTAGACAGTGGGAGTATATATCCTATTGC CTTTCTCAGCTGACTTTCACAGAGAAGGGTTTGAAAAAACTAGTTGATAATTTCAAGATA TTTGAGCATGCATTATCTGAAGATTCTGTAATGAACCACTTCAGAACTGTGATAGCAAAG TGCAAGAAGTTTGCCAAGCCAGATCTCAAAGTTTGCATTGAGGAATTTGATGAGAAACTC AGCAAGGTTCATCAGGAAAAGAAAGAGCAAGAGGCCACGACCAGGAATGCCGAGGCACAC AAACAAAGAATTGGTTCACTTGACAAACTCATGGTAACTAAGAGAACTGGGAAGGATAAG GGAAAATCTGCTGAAGTGGCAGAGGAAACTAGTGAGGTAGTTGATCCATCAACGGAGAGC AATTCTGAAGATAAGGAGAACATGCCAGAATGCAGTGACAATATTTGTTCGGAAAAGAGT CATACATCATCCACGTTTACAGAATCAGACGGTGACAGCACAGAGGTTCAATCAGCGAGA ACTTCTTGCAAAGGCGTGTCGCGTTCAAGGATAAATAAAATGAGAGAACCGGAAGACTCA GAAGACAGTGCTCCAATGAGACGTGTGTCTCGCAGAAGACCAGTTAGGTGATGCCGAACT GTAATATGGACCAGGTGGCAACAACTCCTCTCTGGGAAGATCTCGCCTTGAGATCTTGGA GTTCTGAAGCAACTGGTCTCCCTGGCGCTTGTCCCACCAGAAACTCTATCTAACGCCGAT ATATTTGTTGAATCATAATGTTTATAAGCCTGCGTTGACCTGCTAAATCTTGGTCAGCTC CACACGGAACGGTTTGCTGGATGCTGATATTTCATCTAGTAGGTTGCCTCTGATTGATAA TCCGTAATTGGAGTTCGGTATCTAGTCTCCTTGCCCCGTATGTTGAATTTTTTGTTCGTT ACGATTTGCGCTGCTTGAACAAATCTATACTCGCTTGGTCGAATCCAGAACTTGGTACTA CTAGAGAGATGTACCTGTATGTTGTCTGTAGACTGTACTGCCTCCATTCTCAGTATTGGA GTACATGTTTTAGGTGTATGCAGGTAAACTTTGGATATATATGTATTCCTAAATGTATTA CTAGC