Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0658600-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:27746066:27747742:1 gene:Os07g0658600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nucleoid DNA-binding-like protein. (Os07t0658600-00)
Sequence

ATGGCGCTGAGAATGAGCATCGCGGCGATGTCGGTGTTGGCGGTGGCGGCGGTGCTCGTT
GTGGCCGGCACGGCGGCGGCGGCGGCGGCGTCGTGCCCGGCGACGCCGCCGGACGCGGGG
GCGACGCTGCAGGTGTCGCACGCGTTCGGGCCGTGCTCGCCGCTGGGGGCGGAGTCGGCG
GCGCCGTCGTGGGCGGGGTTCCTGGCGGACCAGGCGGCGCGCGACGCGTCGAGGCTGCTG
TACCTCGACTCGCTGGCGGTGAAGGGGCGCGCGTACGCGCCGATCGCGTCGGGGAGGCAG
CTGCTGCAGACGCCGACGTACGTGGTGCGCGCCCGCCTCGGCACGCCCGCGCAGCAGCTG
CTCCTCGCCGTCGACACCAGCAACGACGCCGCCTGGATCCCCTGCTCCGGCTGCGCGGGC
TGCCCCACCTCGTCGCCGTTCAACCCGGCCGCCTCCGCCTCCTACCGCCCGGTGCCGTGC
GGCTCGCCGCAGTGCGTGCTGGCGCCCAACCCGTCGTGCTCCCCCAACGCCAAGTCCTGC
GGCTTCAGCCTCTCCTACGCCGACTCCTCGCTCCAGGCCGCGCTGTCGCAGGACACCCTC
GCCGTCGCCGGCGACGTCGTGAAGGCCTACACCTTCGGCTGCTTGCAGAGGGCCACCGGC
ACGGCGGCGCCGCCGCAGGGCCTCCTCGGGCTCGGCCGTGGCCCGCTCTCCTTCCTGTCT
CAGACCAAGGACATGTACGGGGCCACGTTCTCCTACTGCCTCCCGAGCTTCAAGTCGCTC
AACTTCTCCGGCACGCTCCGGCTCGGCCGGAACGGGCAGCCGCGGCGGATCAAGACGACG
CCGCTGCTCGCCAACCCGCACCGCTCGTCGCTCTACTACGTCAACATGACCGGCATCCGC
GTGGGGAAAAAGGTGGTGTCGATCCCGGCGTCCGCGCTGGCGTTCGACCCGGCGACGGGC
GCCGGCACGGTGCTCGACTCGGGGACGATGTTCACGCGCCTGGTGGCGCCGGTGTACCTG
GCGCTCCGCGACGAGGTCCGCCGCCGCGTCGGCGCCGGCGCCGCCGCCGTGTCCTCCCTC
GGCGGGTTCGACACGTGCTACAACACCACGGTGGCGTGGCCGCCGGTGACGCTGCTGTTC
GACGGCATGCAGGTGACGCTGCCGGAGGAGAACGTGGTGATCCACACCACGTACGGCACC
ACCAGCTGCCTGGCCATGGCGGCGGCGCCCGACGGCGTCAACACGGTGCTCAACGTCATC
GCCAGCATGCAGCAGCAGAACCACCGCGTCCTCTTCGACGTGCCCAACGGCCGCGTCGGC
TTCGCCCGCGAGAGCTGCACCGCCGCCTAG

Peptide Sequence

PEP ID

Os07t0658600-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:27746066:27747742:1 gene:Os07g0658600 transcript:Os07t0658600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nucleoid DNA-binding-like protein. (Os07t0658600-00)
Sequence

MALRMSIAAMSVLAVAAVLVVAGTAAAAAASCPATPPDAGATLQVSHAFGPCSPLGAESA
APSWAGFLADQAARDASRLLYLDSLAVKGRAYAPIASGRQLLQTPTYVVRARLGTPAQQL
LLAVDTSNDAAWIPCSGCAGCPTSSPFNPAASASYRPVPCGSPQCVLAPNPSCSPNAKSC
GFSLSYADSSLQAALSQDTLAVAGDVVKAYTFGCLQRATGTAAPPQGLLGLGRGPLSFLS
QTKDMYGATFSYCLPSFKSLNFSGTLRLGRNGQPRRIKTTPLLANPHRSSLYYVNMTGIR
VGKKVVSIPASALAFDPATGAGTVLDSGTMFTRLVAPVYLALRDEVRRRVGAGAAAVSSL
GGFDTCYNTTVAWPPVTLLFDGMQVTLPEENVVIHTTYGTTSCLAMAAAPDGVNTVLNVI
ASMQQQNHRVLFDVPNGRVGFARESCTAA

Transcript Sequence

Transcript ID

Os07t0658600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:27746066:27747742:1 gene:Os07g0658600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nucleoid DNA-binding-like protein. (Os07t0658600-00)
Sequence

ACGTGGTGCTCGCCCATTGGCCGGACCGCCGCCTCCGATCACGAGCTCGGTCCCCGGCCA
GCGTCGCCATGCATGGCGCAGAGGCAGCCGAGGCCCCCGCCGTCCTCTGCCCGATACGTC
CAATGGCGAGGCCTCACGGGCGGGCCAGGGCGCGGCCGCTCGCCGTGTCGTTTCCCGCCA
TGGCTCACGTGCTCCCCCGCTATATAGCTCGCTCGGCCACCTCGCCGCACCACCGTGTCA
CCCGCCATTGCTGGTCTTTGCCTTGCTGTGGTGAGAGAGATCGATGGCGCTGAGAATGAG
CATCGCGGCGATGTCGGTGTTGGCGGTGGCGGCGGTGCTCGTTGTGGCCGGCACGGCGGC
GGCGGCGGCGGCGTCGTGCCCGGCGACGCCGCCGGACGCGGGGGCGACGCTGCAGGTGTC
GCACGCGTTCGGGCCGTGCTCGCCGCTGGGGGCGGAGTCGGCGGCGCCGTCGTGGGCGGG
GTTCCTGGCGGACCAGGCGGCGCGCGACGCGTCGAGGCTGCTGTACCTCGACTCGCTGGC
GGTGAAGGGGCGCGCGTACGCGCCGATCGCGTCGGGGAGGCAGCTGCTGCAGACGCCGAC
GTACGTGGTGCGCGCCCGCCTCGGCACGCCCGCGCAGCAGCTGCTCCTCGCCGTCGACAC
CAGCAACGACGCCGCCTGGATCCCCTGCTCCGGCTGCGCGGGCTGCCCCACCTCGTCGCC
GTTCAACCCGGCCGCCTCCGCCTCCTACCGCCCGGTGCCGTGCGGCTCGCCGCAGTGCGT
GCTGGCGCCCAACCCGTCGTGCTCCCCCAACGCCAAGTCCTGCGGCTTCAGCCTCTCCTA
CGCCGACTCCTCGCTCCAGGCCGCGCTGTCGCAGGACACCCTCGCCGTCGCCGGCGACGT
CGTGAAGGCCTACACCTTCGGCTGCTTGCAGAGGGCCACCGGCACGGCGGCGCCGCCGCA
GGGCCTCCTCGGGCTCGGCCGTGGCCCGCTCTCCTTCCTGTCTCAGACCAAGGACATGTA
CGGGGCCACGTTCTCCTACTGCCTCCCGAGCTTCAAGTCGCTCAACTTCTCCGGCACGCT
CCGGCTCGGCCGGAACGGGCAGCCGCGGCGGATCAAGACGACGCCGCTGCTCGCCAACCC
GCACCGCTCGTCGCTCTACTACGTCAACATGACCGGCATCCGCGTGGGGAAAAAGGTGGT
GTCGATCCCGGCGTCCGCGCTGGCGTTCGACCCGGCGACGGGCGCCGGCACGGTGCTCGA
CTCGGGGACGATGTTCACGCGCCTGGTGGCGCCGGTGTACCTGGCGCTCCGCGACGAGGT
CCGCCGCCGCGTCGGCGCCGGCGCCGCCGCCGTGTCCTCCCTCGGCGGGTTCGACACGTG
CTACAACACCACGGTGGCGTGGCCGCCGGTGACGCTGCTGTTCGACGGCATGCAGGTGAC
GCTGCCGGAGGAGAACGTGGTGATCCACACCACGTACGGCACCACCAGCTGCCTGGCCAT
GGCGGCGGCGCCCGACGGCGTCAACACGGTGCTCAACGTCATCGCCAGCATGCAGCAGCA
GAACCACCGCGTCCTCTTCGACGTGCCCAACGGCCGCGTCGGCTTCGCCCGCGAGAGCTG
CACCGCCGCCTAGTCGCCGTCGCCGTCGCCGTCGCCGCCGCCGCCGTCTCACTTTCG