Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0658300-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:27713321:27722641:1 gene:Os07g0658300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPL11-interacting Protein 6, SPL11-interacting protein6 description:Rho GTPase-activating protein, Target of the E3 ligase SPL11, Negative regulation of programmed cell death and innate immunity (Os07t0658300-01);Splicing isoform of SPIN6 (Os07t0658300-02);Splicing isoform of SPIN6 (Os07t0658300-03)
Sequence	ATGGCTGCGGCGACGGCGCCGGTGGCGGGTGCGGCGGAGCGGCAGCAGCAACAGCAGCAG CAGCAGCGCGGCGGGGCGGCGTCGGCGAGCGGCAACGCGGTATTTAAGAGTGGCCCTCTC TTCATATCATCCAAAGGAATTGGATGGAAATCATGGAAAAAGCGTTGGTTCATCCTCACT CGAACATCACTTGTTTTCTTCAAGAGCGACCCTAATACCTTGCCCCAGAGAGGTGGTGAA GTGAATGTTACTTTGGGGGGAATTGACTTGAACAATTCTGGGAGTGTAGTGGTCAGGGAA GACAAGAAATTGTTAACTGTCCTTTTTCCAGATGGTCGTGACGGCCGTGCTTTTACCTTG AAGGCAGAGACATCGGAAGATTTGTTTGAGTGGAAAACAGCATTGGAAGAAGCTCTTGCA CAGGCCCCAAATGCAGCTCTTGTGATGGGACATAATGGGATATTTCGTAATGACACAACA GATCCATATGAAGGAGCTGTTCCAAACTGGCGAGAGAAGAGGCCTATCAAATCATTGGTT GTTGGTAGGCCGATTCTTCTTGCACTGGAAGATATTGATGGCAGCCCTTCTTTCCTAGAA AAAGCTTTGCGTTTTCTTGAGAGACATGGAATAAAGGTGGAGGGAATTTTGCGCCAGGCT GCAGATGTGGAGGAGGTTGACAAAAGAATGCAAGAATATGAGCAAGGAAGGACGGAGTTT GCACAGGATGAGGATGCTCATGTTATTGGTGACTGTGTAAAGCATGTTCTACGTGAACTA CCATCTTCTCCAGTACCTGCTTCCTGCTGCACAGCCTTATTGGAAGCTTTTCGTCTGGAG AGCAAGGAATCTCGGATAAATTCTATGCGTGCGGCAATATCTGAGACATTTCCTGAGCCT AATAGGCGGCTGCTACAGAGAATTTTGAGAATGATGCACACTGTTGCTTCTCATACTGCT GAGAATCGAATGACTGCATCAGCAGTTGCTGCCTGTATGGCTCCTCTCTTGTTGCGTCCA CTTCTGGCTGGTGAGTGTGAGATGGAAGATGACTTGGACATGAATGGTGACAGTTCTGCC CAGCTCATTGCTGCGGCAAATGCTGCCAACAGTGCTCAAGGCATTGTCACTACTCTCTTG GAGGAATATGAGGGTATTTTTTATGATGAGCACCTGAGGTGTTCCCTATCACCTGATTCT CAAATTGAAGATAGCGGAAGTGAAGAGTCAACAGATGATGAAACTGTGGATATCAAGGAC AGTGGATTTCATGATGCAGAGAATGATGCAGATCAAGAATTAGATGACTCTGAGCGCATA TTGAGTGGAAAATTAAGTGAAACCAGTGCATGCACTGCTGGTGACCTCTATGACTACAAG GTAGCTGATGATGATTCAGACGGTGAACCTTCTACAGAAGATAAGGCTTTGGAAACAAAG GTGGATGTAAATGATGCCCAGCATAGTCATTTAGCTGAAAATGTTTCAGTGAATGTCCAG AGATCACCGAATGAAAAAGATCCACCAAATATGGTGTCCAGTCAGGATTCCCCGTTGTCG ATGGGAGATATTCTTTCTTCTTTGGATGCTGGAATTTCCTTACCTGGTCCTGGACCTGAA TATTCTGTAGACAGGCAGTCCATCAAATCCAATGGAACTCAGATGCATGTGAAGCGCTCC AACTTTTGGGGACGGAACAATGGAAGAAAAAGTCAACAGTCAGAATTGGCTGATTCATCG GGTGAAGAAGAGCTTGCTATCCAAAGACTGGAGATCACAAAGAATGACCTCCAGATCAGA ATCGCGAAAGAGGCTAGAGGAAATGCAATCTTACAAGCAAGTTTGGAAAGAAGAAAACAA GCACTACATGAGCGCCGTTTGGCTCTGGAGCAGGATGTTTCAAGGTTGCAAGAGCAGCTA CAAGCTGAAAGAGATCTTAGAGCTGCATTGGAGGTTGGATTAAGCATGTCTTCTGCACAT ATTTCTAGTTCACGTTCTATGGATTCAAAGACGAAGGCAGAGCTTGAGGAGATTGCTCTT GCGGAGGCTGATGTTGCAAGGTTAAAGCAGAAGGTTGCGGAGCTCCATCTCCAACTCAAC CAGCAGCGTCAACATCAGTATGGCTCTTTGGCAGATGCAAATGATCGTTATCAACATCTT CCAAACCATCTCCCACAGAACTTTGTTCAATCAGGTTTTGATATGAACCTTGCTTTCTGT AATCAGGAGAAGAAGCAAAGGAATGAGGGCCCCGCAGGTGCATCGCATTGGAGAAGCATC AAGCAGCACGTGCTACCTCATGGTTCTTCAAGGCCCTTCTCCCGGAAGCACTCCATGGAC GCCTCGTCGAGTGATTCGAGGGAGGCATCAACGAGCATGCCAGCGGATGGCAATTCCATG TCCGTGAACATCCCGAAGGCAACCGAGGGCGTCGAGTACGGGAGGCAAGCTCCCGTGGCA TCGTCCACTCTGGTCGAACTGACGACCAGGCTAGATTTCTTCAAAGAACGGCGGTCACAA TTAATGGAGCAACTCCACAGCCTGGATTTAGGAAATGGATCAGCTAATCATGGTTTCCCA TACAAGTCTTCGTCACCTTGGAACAGTCCAAGGTAG

Peptide Sequence

PEP ID	Os07t0658300-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:27713321:27722641:1 gene:Os07g0658300 transcript:Os07t0658300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPL11-interacting Protein 6, SPL11-interacting protein6 description:Rho GTPase-activating protein, Target of the E3 ligase SPL11, Negative regulation of programmed cell death and innate immunity (Os07t0658300-01);Splicing isoform of SPIN6 (Os07t0658300-02);Splicing isoform of SPIN6 (Os07t0658300-03)
Sequence	MAAATAPVAGAAERQQQQQQQQRGGAASASGNAVFKSGPLFISSKGIGWKSWKKRWFILT RTSLVFFKSDPNTLPQRGGEVNVTLGGIDLNNSGSVVVREDKKLLTVLFPDGRDGRAFTL KAETSEDLFEWKTALEEALAQAPNAALVMGHNGIFRNDTTDPYEGAVPNWREKRPIKSLV VGRPILLALEDIDGSPSFLEKALRFLERHGIKVEGILRQAADVEEVDKRMQEYEQGRTEF AQDEDAHVIGDCVKHVLRELPSSPVPASCCTALLEAFRLESKESRINSMRAAISETFPEP NRRLLQRILRMMHTVASHTAENRMTASAVAACMAPLLLRPLLAGECEMEDDLDMNGDSSA QLIAAANAANSAQGIVTTLLEEYEGIFYDEHLRCSLSPDSQIEDSGSEESTDDETVDIKD SGFHDAENDADQELDDSERILSGKLSETSACTAGDLYDYKVADDDSDGEPSTEDKALETK VDVNDAQHSHLAENVSVNVQRSPNEKDPPNMVSSQDSPLSMGDILSSLDAGISLPGPGPE YSVDRQSIKSNGTQMHVKRSNFWGRNNGRKSQQSELADSSGEEELAIQRLEITKNDLQIR IAKEARGNAILQASLERRKQALHERRLALEQDVSRLQEQLQAERDLRAALEVGLSMSSAH ISSSRSMDSKTKAELEEIALAEADVARLKQKVAELHLQLNQQRQHQYGSLADANDRYQHL PNHLPQNFVQSGFDMNLAFCNQEKKQRNEGPAGASHWRSIKQHVLPHGSSRPFSRKHSMD ASSSDSREASTSMPADGNSMSVNIPKATEGVEYGRQAPVASSTLVELTTRLDFFKERRSQ LMEQLHSLDLGNGSANHGFPYKSSSPWNSPR

Transcript Sequence

Transcript ID	Os07t0658300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:27713321:27722641:1 gene:Os07g0658300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPL11-interacting Protein 6, SPL11-interacting protein6 description:Rho GTPase-activating protein, Target of the E3 ligase SPL11, Negative regulation of programmed cell death and innate immunity (Os07t0658300-01);Splicing isoform of SPIN6 (Os07t0658300-02);Splicing isoform of SPIN6 (Os07t0658300-03)
Sequence	ACGCGCCCACGCCCACCACCACCACCACCTCCATGACTGCATCCTCCTCCAAAAACCCAA GGCACAAATCCTAACCACCGGACGCGAGCCGACGCGACGCGACGCGAGTCCCCATCCACA TCGCTCGCGGCCCTTCCACCGCACGCCAGATCGGTGGCGGCGGCGGCTGCTCGGGGTTGG ATCCAATGCGAGCGGTGATTGATAGCTGTTGATGCGAAGGACGACGATCTGAGGTGGTGG TGGAGTTGGGGGGATGGCTGCGGCGACGGCGCCGGTGGCGGGTGCGGCGGAGCGGCAGCA GCAACAGCAGCAGCAGCAGCGCGGCGGGGCGGCGTCGGCGAGCGGCAACGCGGTATTTAA GAGTGGCCCTCTCTTCATATCATCCAAAGGAATTGGATGGAAATCATGGAAAAAGCGTTG GTTCATCCTCACTCGAACATCACTTGTTTTCTTCAAGAGCGACCCTAATACCTTGCCCCA GAGAGGTGGTGAAGTGAATGTTACTTTGGGGGGAATTGACTTGAACAATTCTGGGAGTGT AGTGGTCAGGGAAGACAAGAAATTGTTAACTGTCCTTTTTCCAGATGGTCGTGACGGCCG TGCTTTTACCTTGAAGGCAGAGACATCGGAAGATTTGTTTGAGTGGAAAACAGCATTGGA AGAAGCTCTTGCACAGGCCCCAAATGCAGCTCTTGTGATGGGACATAATGGGATATTTCG TAATGACACAACAGATCCATATGAAGGAGCTGTTCCAAACTGGCGAGAGAAGAGGCCTAT CAAATCATTGGTTGTTGGTAGGCCGATTCTTCTTGCACTGGAAGATATTGATGGCAGCCC TTCTTTCCTAGAAAAAGCTTTGCGTTTTCTTGAGAGACATGGAATAAAGGTGGAGGGAAT TTTGCGCCAGGCTGCAGATGTGGAGGAGGTTGACAAAAGAATGCAAGAATATGAGCAAGG AAGGACGGAGTTTGCACAGGATGAGGATGCTCATGTTATTGGTGACTGTGTAAAGCATGT TCTACGTGAACTACCATCTTCTCCAGTACCTGCTTCCTGCTGCACAGCCTTATTGGAAGC TTTTCGTCTGGAGAGCAAGGAATCTCGGATAAATTCTATGCGTGCGGCAATATCTGAGAC ATTTCCTGAGCCTAATAGGCGGCTGCTACAGAGAATTTTGAGAATGATGCACACTGTTGC TTCTCATACTGCTGAGAATCGAATGACTGCATCAGCAGTTGCTGCCTGTATGGCTCCTCT CTTGTTGCGTCCACTTCTGGCTGGTGAGTGTGAGATGGAAGATGACTTGGACATGAATGG TGACAGTTCTGCCCAGCTCATTGCTGCGGCAAATGCTGCCAACAGTGCTCAAGGCATTGT CACTACTCTCTTGGAGGAATATGAGGGTATTTTTTATGATGAGCACCTGAGGTGTTCCCT ATCACCTGATTCTCAAATTGAAGATAGCGGAAGTGAAGAGTCAACAGATGATGAAACTGT GGATATCAAGGACAGTGGATTTCATGATGCAGAGAATGATGCAGATCAAGAATTAGATGA CTCTGAGCGCATATTGAGTGGAAAATTAAGTGAAACCAGTGCATGCACTGCTGGTGACCT CTATGACTACAAGGTAGCTGATGATGATTCAGACGGTGAACCTTCTACAGAAGATAAGGC TTTGGAAACAAAGGTGGATGTAAATGATGCCCAGCATAGTCATTTAGCTGAAAATGTTTC AGTGAATGTCCAGAGATCACCGAATGAAAAAGATCCACCAAATATGGTGTCCAGTCAGGA TTCCCCGTTGTCGATGGGAGATATTCTTTCTTCTTTGGATGCTGGAATTTCCTTACCTGG TCCTGGACCTGAATATTCTGTAGACAGGCAGTCCATCAAATCCAATGGAACTCAGATGCA TGTGAAGCGCTCCAACTTTTGGGGACGGAACAATGGAAGAAAAAGTCAACAGTCAGAATT GGCTGATTCATCGGGTGAAGAAGAGCTTGCTATCCAAAGACTGGAGATCACAAAGAATGA CCTCCAGATCAGAATCGCGAAAGAGGCTAGAGGAAATGCAATCTTACAAGCAAGTTTGGA AAGAAGAAAACAAGCACTACATGAGCGCCGTTTGGCTCTGGAGCAGGATGTTTCAAGGTT GCAAGAGCAGCTACAAGCTGAAAGAGATCTTAGAGCTGCATTGGAGGTTGGATTAAGCAT GTCTTCTGCACATATTTCTAGTTCACGTTCTATGGATTCAAAGACGAAGGCAGAGCTTGA GGAGATTGCTCTTGCGGAGGCTGATGTTGCAAGGTTAAAGCAGAAGGTTGCGGAGCTCCA TCTCCAACTCAACCAGCAGCGTCAACATCAGTATGGCTCTTTGGCAGATGCAAATGATCG TTATCAACATCTTCCAAACCATCTCCCACAGAACTTTGTTCAATCAGGTTTTGATATGAA CCTTGCTTTCTGTAATCAGGAGAAGAAGCAAAGGAATGAGGGCCCCGCAGGTGCATCGCA TTGGAGAAGCATCAAGCAGCACGTGCTACCTCATGGTTCTTCAAGGCCCTTCTCCCGGAA GCACTCCATGGACGCCTCGTCGAGTGATTCGAGGGAGGCATCAACGAGCATGCCAGCGGA TGGCAATTCCATGTCCGTGAACATCCCGAAGGCAACCGAGGGCGTCGAGTACGGGAGGCA AGCTCCCGTGGCATCGTCCACTCTGGTCGAACTGACGACCAGGCTAGATTTCTTCAAAGA ACGGCGGTCACAATTAATGGAGCAACTCCACAGCCTGGATTTAGGAAATGGATCAGCTAA TCATGGTTTCCCATACAAGTCTTCGTCACCTTGGAACAGTCCAAGGTAGGAGGAGACTTC TTTTTTTTTGCGACATTCTGTTTGTATATTCTTGGTAAAGAATCCTCTCGTTTTCTTTCG TAGAAGCTGCTAGTGAGAATGAATGTATATCCCTTTCCTGTTCGTCTTCCATTTGTTTTT GTTTTGTTGTTGCATGCGGCAGCCTCTTTTGGGTGTGATTTTGTAATATGCTTTTTGTAA TCTATTGTATGTAACACGAGTTGGGGGGATCATAATCATTGCCACTTGTTTCTGGTGTCT TTCC