Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0656900-00
CDS Infomation	cds chromosome:IRGSP-1.0:7:27639160:27643492:-1 gene:Os07g0656900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SERINE CARBOXYPEPTIDASE 40 description:Similar to Serine carboxypepsidase (Fragment). (Os07t0656900-00)
Sequence	AAGGAGGCGGACCGCGTGGCGGGGCTGCCGGGGCAGCCGGCCGGCGTGGGCTTCGCGCAG TACGCCGGGTACGTGACGGTGGACGCGGCGGCGGGGCGCGCGCTGTTCTACTACCTCGCC GAGGCCGACGGCGGCGCCGCCGCGTCGTCCAAGGCGCCCCTCCTCCTCTGGCTCAACGGC GGCCCCGGCTGCTCGTCGCTCGGGTACGGCGCCATGGAGGAGCTCGGCCCGTTCCGCGTC AAGAGCGACGGCGTGTCGCTCTACCGCAATCCCTACTCCTGGAACAACGTGGCGAACGTG ATGTTCCTGGAGAGCCCGATCGGCGTGGGGTTCTCGTACTCGAACACGACGGCGGACTAC AGCCGGATGGGGGACAACAGCACGGCGGAGGACGCGTACAAGTTCCTCGTCAACTGGATG GAGCGCTTCCCGGAGTACAAGGGCCGCGACTTCTACCTCGCCGGCGAGAGCTACGCCGGC CACTACGTCCCCCAGCTCGCCCACGCCATCCTCCGCCACTCCTCCGCCGCCGCCGGCGGC AAGCCCTCCTCCTCGCCGATCAACCTCAAAGGCATCATGATTGGGAACGCGGTGATCAAC GACTGGACGGACACAAAGGGGATGTACGACTTCTTCTGGACGCACGCGCTCATCTCCGAC GAGGCCAACGACGGCATCACCAAGCACTGCAACTTCACCGACGGCGCCGACGCCAACAGC CTCTGCGACGACGCCACCAGCCTCGCCGACGACTGCCTCCAGGACATCGACATCTACAAC ATCTACGCCCCCAACTGCCAGTCGCCCGGCCTTGTCGTCTCGCCGCCGGTCACCCCCTCG ATTGAGAGCTTTGATCCGTGCACGGATTACTATGTGGAGGCCTACCTCAACAACCCTGAT GTGCAAAAGGCGCTGCACGCAAACATCACCAGGCTTGATCACCCGTGGTCCGCTTGCAGT GGAGTCTTGAGACGCTGGGTCGACAGCGCTTCAACGGTTCTGCCCATTATCAAGGAGCTC CTGAAGAACAACATCAGAGTCTGGGTGTACAGTGGAGACACTGATGGGAGAGTACCTGTC ACTTCCAGCAGATACTCTGTCAACCAGCTCAACCTTCCAGTTGCTGCTAAATGGAGACCA TGGTTTAGCAACACTCAGGGTGTTGGAGACGTTGGTGGATACATTGTGCAGTACAAGGGG AACCTCAGCCTTGTAACCGTGAGAGGAGCAGGCCATGAAGTCCCCAGCTACCAGCCACAG CGAGCGCTTGTGCTTGTCCAGTATTTCCTTGAAGGCAAAACGCTACCTGATTGCGAAAAA TGTGGAGAGGCTTAG

Peptide Sequence

PEP ID	Os07t0656900-00
PEP Infomation	pep chromosome:IRGSP-1.0:7:27639160:27643492:-1 gene:Os07g0656900 transcript:Os07t0656900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SERINE CARBOXYPEPTIDASE 40 description:Similar to Serine carboxypepsidase (Fragment). (Os07t0656900-00)
Sequence	KEADRVAGLPGQPAGVGFAQYAGYVTVDAAAGRALFYYLAEADGGAAASSKAPLLLWLNG GPGCSSLGYGAMEELGPFRVKSDGVSLYRNPYSWNNVANVMFLESPIGVGFSYSNTTADY SRMGDNSTAEDAYKFLVNWMERFPEYKGRDFYLAGESYAGHYVPQLAHAILRHSSAAAGG KPSSSPINLKGIMIGNAVINDWTDTKGMYDFFWTHALISDEANDGITKHCNFTDGADANS LCDDATSLADDCLQDIDIYNIYAPNCQSPGLVVSPPVTPSIESFDPCTDYYVEAYLNNPD VQKALHANITRLDHPWSACSGVLRRWVDSASTVLPIIKELLKNNIRVWVYSGDTDGRVPV TSSRYSVNQLNLPVAAKWRPWFSNTQGVGDVGGYIVQYKGNLSLVTVRGAGHEVPSYQPQ RALVLVQYFLEGKTLPDCEKCGEA

Transcript Sequence

Transcript ID	Os07t0656900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:27639160:27643492:-1 gene:Os07g0656900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SERINE CARBOXYPEPTIDASE 40 description:Similar to Serine carboxypepsidase (Fragment). (Os07t0656900-00)
Sequence	CAAGGAGGCGGACCGCGTGGCGGGGCTGCCGGGGCAGCCGGCCGGCGTGGGCTTCGCGCA GTACGCCGGGTACGTGACGGTGGACGCGGCGGCGGGGCGCGCGCTGTTCTACTACCTCGC CGAGGCCGACGGCGGCGCCGCCGCGTCGTCCAAGGCGCCCCTCCTCCTCTGGCTCAACGG CGGCCCCGGCTGCTCGTCGCTCGGGTACGGCGCCATGGAGGAGCTCGGCCCGTTCCGCGT CAAGAGCGACGGCGTGTCGCTCTACCGCAATCCCTACTCCTGGAACAACGTGGCGAACGT GATGTTCCTGGAGAGCCCGATCGGCGTGGGGTTCTCGTACTCGAACACGACGGCGGACTA CAGCCGGATGGGGGACAACAGCACGGCGGAGGACGCGTACAAGTTCCTCGTCAACTGGAT GGAGCGCTTCCCGGAGTACAAGGGCCGCGACTTCTACCTCGCCGGCGAGAGCTACGCCGG CCACTACGTCCCCCAGCTCGCCCACGCCATCCTCCGCCACTCCTCCGCCGCCGCCGGCGG CAAGCCCTCCTCCTCGCCGATCAACCTCAAAGGCATCATGATTGGGAACGCGGTGATCAA CGACTGGACGGACACAAAGGGGATGTACGACTTCTTCTGGACGCACGCGCTCATCTCCGA CGAGGCCAACGACGGCATCACCAAGCACTGCAACTTCACCGACGGCGCCGACGCCAACAG CCTCTGCGACGACGCCACCAGCCTCGCCGACGACTGCCTCCAGGACATCGACATCTACAA CATCTACGCCCCCAACTGCCAGTCGCCCGGCCTTGTCGTCTCGCCGCCGGTCACCCCCTC GATTGAGAGCTTTGATCCGTGCACGGATTACTATGTGGAGGCCTACCTCAACAACCCTGA TGTGCAAAAGGCGCTGCACGCAAACATCACCAGGCTTGATCACCCGTGGTCCGCTTGCAG TGGAGTCTTGAGACGCTGGGTCGACAGCGCTTCAACGGTTCTGCCCATTATCAAGGAGCT CCTGAAGAACAACATCAGAGTCTGGGTGTACAGTGGAGACACTGATGGGAGAGTACCTGT CACTTCCAGCAGATACTCTGTCAACCAGCTCAACCTTCCAGTTGCTGCTAAATGGAGACC ATGGTTTAGCAACACTCAGGGTGTTGGAGACGTTGGTGGATACATTGTGCAGTACAAGGG GAACCTCAGCCTTGTAACCGTGAGAGGAGCAGGCCATGAAGTCCCCAGCTACCAGCCACA GCGAGCGCTTGTGCTTGTCCAGTATTTCCTTGAAGGCAAAACGCTACCTGATTGCGAAAA ATGTGGAGAGGCTTAG