Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0656400-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:27620792:27623614:1 gene:Os07g0656400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF288 domain containing protein. (Os07t0656400-01)
Sequence

ATGGCGAGTTCCAGATGCCGCGTGGCCTACGTCGTCCTCGCGGCGCTCGCGGCGGCGCCG
TTCCTGCTGCTCCTCCTCTACGGCGGCGGGTCCCCGTCCGCGCTCTGCCTCGCCGCCGCA
CGCTCCGGCGGTGCGTCGCGCCGGCTCCAGTACCCGTCTGTCGCGTGGTCGCGCGTGCCC
CCTCTCCCGGTGCTCCCGTCCTCGCCGCTCCCGTCGCTGCGCGCCTCCAGGTGGATCATC
TTCGCCGCGGCGGCCCACCACCCGCGCCACCGCCCGCTGCCCGCGGTCCCCGGGTGGCAG
CTCCTCGCCGTGGCCGACGAGACCACGCCCCCGGACTGGTCGCACCCGGGCGCCGCGCTG
CTCACGCTCGCCGACCAGGCGCGCCTCGGGTTCCGCTCCGTTGCCTTCCTCCCCGCGCGC
GGCCACGCCCGCAAGGCCGCCGCCTACCTCTTCGCCGTGCAGCGCGGCGCGCGCGTCATC
TACGACGCGGACGCGCGCAACGCCGTCCTGGGCAGTAACCTCACCAAGCACTTCGATGTC
GATCTGGACCATCGCCAAGGGGGCGGCGTGCTCTTGCAGTACAGCCATGCGGATCCCAAC
CGCACGGTGGTGAATCCCTACGTGCACTTTGGGCAGCCGTCGGTGTGGCCGCGGGGGTTG
CCGCTGCACAAAGCCGGGGAGGTGGGTGTGGAAGAATTCTACACTCAGGTGTTCGGTGGC
GGGCAGTTCATACAGCAGGGGCTGTGCAATGGCCTACCGGATGTTGACGCTGTGTTCTAC
TTCACTCGGAAATCATCGGAAATGGAAGCTTTTGATCTCCGGTTTGATGCAGATGCGCCT
AAGGTCGCACTTCCTCAGGGCATGATGGCTCCAATCAACTCAGTTAATACACTGTTCCAT
TCACCGGCATTTTGGGGGCTTGCATTGCCAGTATCAGTGAGTCCAATGGCAGCTGATGTT
ATACGTGGGTATTGGTCGCAGCGCATATTATGGGAGATTGGGGGTTACTTAGTGGTCTAC
CCACCGACCGTGCACCGCATGGATAATGTGCATGCTCACCCGTTTGATGATGAGAAGGAT
ATCCATGTCAGTGTAGGGAGGCTGATAGATTTCCTAATGGAGTGGCGGTCACATAAGCAG
ACACTCTTTGAACGTATTCTTGATTTGAGTTATGCGATGACTGAGGAGGGGTTCTGGGGA
GAGAAGGATTTGCAGTTCATGTCCGCGTGGCTGCAAGATCTGGTCTCTGTTGGTTACCGG
CAGCCAAGGTTGATGTCATTGGAGATTGATCGGCCAAGGGCGACCATTGGACATGGGGAC
AAGCAGGTGTTTGTCCCCAAGAAACTGCCTACCGTACATCTTGGTGTTGAGGAGATTGGG
GAAGTTAGCACTGAGATTGGAAATCTCATAAAATGGAGGAAGCACTTTGGTGATGTTGTG
CTTATAGTGCACTGCACCGTACCTGTGGACCGTGTTGCACTTGAGTGGAGATTGCTTTAT
GGTCGTATATTCAGGGCAGTTGTTATTCTTTCAGAGAAAAGCAATTCAGATCTTGCTGTT
GAAGTCAGCAACTTGGCACAAGCTTACAAGTTCTTGCCAAAGGTGTTTGACCGGTTTGCA
GGTGCTGGGGGATTTATGTTCCTTCAGGATCATATGATCCTCAATTATTGGAACCTCTAT
GATTTTGACAAGGCTAAGCTCTGGATAACCAACAAGGTGAAGGAATCATGGTCCGATGTC
CCCTTACATGGCAATAAAATTGAATGGTTCATTAACCAAGGAGATATGGTAAAAAAGGCA
ATTGCTAGCTTTCCATTTCAATATCAAGCCAACTACAAAAGAAGTGTTGGCGAAGATAAG
ATAATTCATTGCAACAGTGAGATATTCTACATACCTCGAAGTCACATTGGTGACTTTTCT
TATCTAGTTCAAGCTATTGGAAGCTTAGACATTCATCACAGTATTGCTATCCCCATGTTG
TTCCTTGCAATGGATTTGCCAAGCAATTTTGAATCAAAAGCTTTGACCAAACTTATTTAT
AGGACAAATGTGCAATCAAATGCCACTTTTGCAACAATATACACTGCTCAAGCACATGCA
GTGTACCCAATGAAGGTTCAGAATGAGATAGATTTTGTAGAGCTAATCAGAGTCATGGCT
TCAGGTGATCCGTTTCTTATGGAATTGATCTGA

Peptide Sequence

PEP ID

Os07t0656400-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:27620792:27623614:1 gene:Os07g0656400 transcript:Os07t0656400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF288 domain containing protein. (Os07t0656400-01)
Sequence

MASSRCRVAYVVLAALAAAPFLLLLLYGGGSPSALCLAAARSGGASRRLQYPSVAWSRVP
PLPVLPSSPLPSLRASRWIIFAAAAHHPRHRPLPAVPGWQLLAVADETTPPDWSHPGAAL
LTLADQARLGFRSVAFLPARGHARKAAAYLFAVQRGARVIYDADARNAVLGSNLTKHFDV
DLDHRQGGGVLLQYSHADPNRTVVNPYVHFGQPSVWPRGLPLHKAGEVGVEEFYTQVFGG
GQFIQQGLCNGLPDVDAVFYFTRKSSEMEAFDLRFDADAPKVALPQGMMAPINSVNTLFH
SPAFWGLALPVSVSPMAADVIRGYWSQRILWEIGGYLVVYPPTVHRMDNVHAHPFDDEKD
IHVSVGRLIDFLMEWRSHKQTLFERILDLSYAMTEEGFWGEKDLQFMSAWLQDLVSVGYR
QPRLMSLEIDRPRATIGHGDKQVFVPKKLPTVHLGVEEIGEVSTEIGNLIKWRKHFGDVV
LIVHCTVPVDRVALEWRLLYGRIFRAVVILSEKSNSDLAVEVSNLAQAYKFLPKVFDRFA
GAGGFMFLQDHMILNYWNLYDFDKAKLWITNKVKESWSDVPLHGNKIEWFINQGDMVKKA
IASFPFQYQANYKRSVGEDKIIHCNSEIFYIPRSHIGDFSYLVQAIGSLDIHHSIAIPML
FLAMDLPSNFESKALTKLIYRTNVQSNATFATIYTAQAHAVYPMKVQNEIDFVELIRVMA
SGDPFLMELI

Transcript Sequence

Transcript ID

Os07t0656400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:27620792:27623614:1 gene:Os07g0656400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF288 domain containing protein. (Os07t0656400-01)
Sequence

GGGCCTCGTCGCCGGCGGCGAAACAACCTCGCGGGCTGCGCGGCGCCGCCGCGAGGCCAT
TGACTCCGACGAGGACTAGCTGTCCACCTCGGCAGCAACGCCACTACTACCAAGTGGAGG
AGTAGTAGTACTCCACCAAGTCGCCTCTCCCCTCTCCCATCTCGCCACCACCACTACGCC
CAAAAATGGCGAGTTCCAGATGCCGCGTGGCCTACGTCGTCCTCGCGGCGCTCGCGGCGG
CGCCGTTCCTGCTGCTCCTCCTCTACGGCGGCGGGTCCCCGTCCGCGCTCTGCCTCGCCG
CCGCACGCTCCGGCGGTGCGTCGCGCCGGCTCCAGTACCCGTCTGTCGCGTGGTCGCGCG
TGCCCCCTCTCCCGGTGCTCCCGTCCTCGCCGCTCCCGTCGCTGCGCGCCTCCAGGTGGA
TCATCTTCGCCGCGGCGGCCCACCACCCGCGCCACCGCCCGCTGCCCGCGGTCCCCGGGT
GGCAGCTCCTCGCCGTGGCCGACGAGACCACGCCCCCGGACTGGTCGCACCCGGGCGCCG
CGCTGCTCACGCTCGCCGACCAGGCGCGCCTCGGGTTCCGCTCCGTTGCCTTCCTCCCCG
CGCGCGGCCACGCCCGCAAGGCCGCCGCCTACCTCTTCGCCGTGCAGCGCGGCGCGCGCG
TCATCTACGACGCGGACGCGCGCAACGCCGTCCTGGGCAGTAACCTCACCAAGCACTTCG
ATGTCGATCTGGACCATCGCCAAGGGGGCGGCGTGCTCTTGCAGTACAGCCATGCGGATC
CCAACCGCACGGTGGTGAATCCCTACGTGCACTTTGGGCAGCCGTCGGTGTGGCCGCGGG
GGTTGCCGCTGCACAAAGCCGGGGAGGTGGGTGTGGAAGAATTCTACACTCAGGTGTTCG
GTGGCGGGCAGTTCATACAGCAGGGGCTGTGCAATGGCCTACCGGATGTTGACGCTGTGT
TCTACTTCACTCGGAAATCATCGGAAATGGAAGCTTTTGATCTCCGGTTTGATGCAGATG
CGCCTAAGGTCGCACTTCCTCAGGGCATGATGGCTCCAATCAACTCAGTTAATACACTGT
TCCATTCACCGGCATTTTGGGGGCTTGCATTGCCAGTATCAGTGAGTCCAATGGCAGCTG
ATGTTATACGTGGGTATTGGTCGCAGCGCATATTATGGGAGATTGGGGGTTACTTAGTGG
TCTACCCACCGACCGTGCACCGCATGGATAATGTGCATGCTCACCCGTTTGATGATGAGA
AGGATATCCATGTCAGTGTAGGGAGGCTGATAGATTTCCTAATGGAGTGGCGGTCACATA
AGCAGACACTCTTTGAACGTATTCTTGATTTGAGTTATGCGATGACTGAGGAGGGGTTCT
GGGGAGAGAAGGATTTGCAGTTCATGTCCGCGTGGCTGCAAGATCTGGTCTCTGTTGGTT
ACCGGCAGCCAAGGTTGATGTCATTGGAGATTGATCGGCCAAGGGCGACCATTGGACATG
GGGACAAGCAGGTGTTTGTCCCCAAGAAACTGCCTACCGTACATCTTGGTGTTGAGGAGA
TTGGGGAAGTTAGCACTGAGATTGGAAATCTCATAAAATGGAGGAAGCACTTTGGTGATG
TTGTGCTTATAGTGCACTGCACCGTACCTGTGGACCGTGTTGCACTTGAGTGGAGATTGC
TTTATGGTCGTATATTCAGGGCAGTTGTTATTCTTTCAGAGAAAAGCAATTCAGATCTTG
CTGTTGAAGTCAGCAACTTGGCACAAGCTTACAAGTTCTTGCCAAAGGTGTTTGACCGGT
TTGCAGGTGCTGGGGGATTTATGTTCCTTCAGGATCATATGATCCTCAATTATTGGAACC
TCTATGATTTTGACAAGGCTAAGCTCTGGATAACCAACAAGGTGAAGGAATCATGGTCCG
ATGTCCCCTTACATGGCAATAAAATTGAATGGTTCATTAACCAAGGAGATATGGTAAAAA
AGGCAATTGCTAGCTTTCCATTTCAATATCAAGCCAACTACAAAAGAAGTGTTGGCGAAG
ATAAGATAATTCATTGCAACAGTGAGATATTCTACATACCTCGAAGTCACATTGGTGACT
TTTCTTATCTAGTTCAAGCTATTGGAAGCTTAGACATTCATCACAGTATTGCTATCCCCA
TGTTGTTCCTTGCAATGGATTTGCCAAGCAATTTTGAATCAAAAGCTTTGACCAAACTTA
TTTATAGGACAAATGTGCAATCAAATGCCACTTTTGCAACAATATACACTGCTCAAGCAC
ATGCAGTGTACCCAATGAAGGTTCAGAATGAGATAGATTTTGTAGAGCTAATCAGAGTCA
TGGCTTCAGGTGATCCGTTTCTTATGGAATTGATCTGATGTAGGAATTCACTAAAACTGT
ATACTTCGGACTGGGAAGGGAAAACAAAACAAAGTTTATTCAGTATATTGTTTTGTTCTT
CTTTGCCATCCACTTCAGCTGTAAGTTCAATTTAACACCCTTTTTGTTGAGCAAGATATG
CTGTTTTTTCTTGGTGTCATTTACATGTGGAATCAGATGCCAGAAACTTACTTTG