Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0654700-00
CDS Infomation	cds chromosome:IRGSP-1.0:7:27501837:27507177:1 gene:Os07g0654700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to BLE2 protein. (Os07t0654700-00)
Sequence	ATGGCAAGGCCGTCTCCCGTTGAGGCAAGCGGTGGTCCGGTGATGGGAGACATCACCGGC GGCGGTGGAGAGCTTCGAGTCCAGATAGCAGCCAACTCCGGCGGGCAAGGTGGCAAGGTC GTCGGCGCCGCGCCGGAGAAGTGTCTGAATCGCTTCGTCCGCGTGGTGGCGCTGATGGAG AGGACGGGCAACGCCCTCGGCACGCTGGCCTTCACCTGGGCTACCGTCATCCTCCTCGGC GGCTACCCCACCGTGCTTGACTCGAAGCCGAAGAACAATAGCGACTATTGGTTCACGACA GTCATCGTATTCATAGAAGCCGCAAGGATGTTCAGCAGCGACAAATCCGATTATCAGTTG TTCTTCCGAGCAAGAGGTGCTTTCAGATTCCTTGGAAGCAGTGGACTGATTGCAATCGTA TTCTTTTGGGATGCATACGCAATGCTGGGCATGGTTGCTTCGAACTTGCCTGCCTGGGCA CACAACTTACTTTCAATCTTGTTAATACTGGTACCACTTGCGATTGGCCAGCTTCTAAGA GCAGCTCGAAGACCGACCAGTAAGTTTAACTGGCTGTGGCCTGCGATCTGTCTGGTCGCA ATCCTATTGCTAGCTTTTCCAGTACTTGTATATTACGACCCGCGAATGCACAAAATCAAT TTCATAAACCGATTGACCGTGTGGATACCGTACATATTTCTCTCTGCGATTGTGCTCCTA GTAACGATCAGCAGGCTGCAGTACCCAATTATCACAAACCTAGTGCACGGTGCTCTGGGC AGCAAGCATGCATTTTGGAGTCGGTTTATTCTAATTTCATGCATCTTTGCTGCAATAGTG ATGCTGGTTGTCATGGTTGATCCAGAGTGTCGATTAATTATGATCGCGATCGCAATCATA CTGTCATTTGGCAACTTACATATCCCAGCAGCACTCATGCGTGTCAACCTCGCGGGGATG CGCCTTGCAAAACATAACTACTTCGGTGTTGATGACCGACAAAATCTTGGTGAATCTCTA ACCATATTCTATAGCATGGTGCTTGGCCAAGGAATACTTTACATCGTTGCAGGCATACTG GAGGTCTTCTCGTTCATCCCTCGGAGAACCCTCGTCCGCCGTGGTGGATTCACAGGCCAA TGGGGAGTTGAATCTGTCAATCTATACTACACATACGCCTTCGAGAAAAACATGGAAGGA GGTGTATTTGCTGCAAAGAGGATCAGCCTCAGCAACTTTGCCATGGATTCTATAAATTCT GACTTGTCCAAGAAACAGCTGTATGGGATCTGGATGATGCACATTTTTCTGCAGAGAGAT CCGACCAGGGCACAGCTACTGGAGAAACTGACCACTTCAACGCAGACCATGGCTAGGTTA ATCAGTATGCTGGGCTGGACTAGCAGAAATGATCATACAACTATCAGGTTATATGCCGCC AAGGTAACTGCCGAGCTTGCAAAGAGCCTCCGAGTTGTAACTGTCCCTGGGACGATGTAC CTTGTTTCTACACTCCTGGATACTGACAGAAAACCAAAAAGAAGACACCCGCTTCTGGAT GAAGATGATGATCGAGATCCTTTATTTGTTGATACAGTAGAAAGTCAGGAGAAAAGTCTG GATGCAGCTGGTGATCAAGGGCAAAGACAAGGGTCAGCTGGGGACACTGATATCATGCTG AAAACACCAACCCGATCAACGCACATGAACAACCCAAGATCCACATACAAATGCTGGGAA TCCACATACAAATGCTGGGAGAGGATATCAGAGTACCAGTCAATTCCCAAGGAGCGACCA TTAACAGACGATGATCTTCTCCCTGCACTAGGCATGTCAATTGTTTATAGCCTTGCTGGT TGTGATCAAAATAACTGTGTGGAAATCGACAAAGTAACTGACCTGATCCCAAAAATCATT GGATTCACAAGCTTCAGAAGCGCAACGTTAAATTCCGAAGCACAACAGAAGGTTCTCATA AAGTTATCACTGCAGGCGCTGCAGAGGCTCACAAGCATTGAAGGGGAAATTGGCATGACA CTGCGGTACAAGATAACAAAACATCCCTTCTTACTGCGAAATCTTGCAGAGATCTTGAGA GACAGCAGCAGTAGCAATCAAGAACTAAGGAGGCTCGTGGCAGGAATCCTTAGAAATCTT GCCATTGACAGAGACACAAGGCAGGAGATTGGACAAATGCAAGTGCTCATTACCAGGCTG ATCAAAGCATTCCTCGATTCCAACGGACCATCTAGTTCAGATGTTGATTGCTTGCTGCCA AAGGTCGCTGGGCAAGCACTGGTAATGCTGTCATTAGAAAATTCACATAACTGCTTCGTT ATATTGAAGGAACCAGAGTTTATTAATAAACTAAAAAATATGATACTAATCCATGATGAT AAATACATATATGTGGCAGCAAGCCTGTTGCGTAATATGTGCCTGCACGCTCAACCCGAG CTCACAGAATTAGACCTAAAGGAACTATCTCAGACCTTGCGAGAGGTGTTGGAAAGAATA ATGGACGCTGAAGGGGCGGAACTAGAAATCCTGATTGGCCTTAGTTCACAGATATGCAAA CTCATTCCTGAAGAATTTTCCCAACAGCTAGAGCATGGACAGATTAAGCGGAGATTCATT AAGAGGCTAGTGGACACACTGAATGCAAACATGAACCCAAGTTCTCATTGCCCTGGGATC CGGAGGGTGGTACTTGAGCAATCCATATACATGATGGAGTACAATTCTCACTATGCCAAT TGTTTCAATGAATACCAGATGATGGACGCACTGTCAATTGTAGAATTGACGCCCTCAAGG GCTGAGAATTACATGGTTTTCTTGGGTGACACAGGTTTCATGGAATGTAACACACCTCTC TCTGCCCTAGCGGACAGGGCAAAAGAACTGATGGGTCGTCAGTGGCTGCAAGGTATCAAC AGTGCCAATTGA

Peptide Sequence

PEP ID	Os07t0654700-00
PEP Infomation	pep chromosome:IRGSP-1.0:7:27501837:27507177:1 gene:Os07g0654700 transcript:Os07t0654700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to BLE2 protein. (Os07t0654700-00)
Sequence	MARPSPVEASGGPVMGDITGGGGELRVQIAANSGGQGGKVVGAAPEKCLNRFVRVVALME RTGNALGTLAFTWATVILLGGYPTVLDSKPKNNSDYWFTTVIVFIEAARMFSSDKSDYQL FFRARGAFRFLGSSGLIAIVFFWDAYAMLGMVASNLPAWAHNLLSILLILVPLAIGQLLR AARRPTSKFNWLWPAICLVAILLLAFPVLVYYDPRMHKINFINRLTVWIPYIFLSAIVLL VTISRLQYPIITNLVHGALGSKHAFWSRFILISCIFAAIVMLVVMVDPECRLIMIAIAII LSFGNLHIPAALMRVNLAGMRLAKHNYFGVDDRQNLGESLTIFYSMVLGQGILYIVAGIL EVFSFIPRRTLVRRGGFTGQWGVESVNLYYTYAFEKNMEGGVFAAKRISLSNFAMDSINS DLSKKQLYGIWMMHIFLQRDPTRAQLLEKLTTSTQTMARLISMLGWTSRNDHTTIRLYAA KVTAELAKSLRVVTVPGTMYLVSTLLDTDRKPKRRHPLLDEDDDRDPLFVDTVESQEKSL DAAGDQGQRQGSAGDTDIMLKTPTRSTHMNNPRSTYKCWESTYKCWERISEYQSIPKERP LTDDDLLPALGMSIVYSLAGCDQNNCVEIDKVTDLIPKIIGFTSFRSATLNSEAQQKVLI KLSLQALQRLTSIEGEIGMTLRYKITKHPFLLRNLAEILRDSSSSNQELRRLVAGILRNL AIDRDTRQEIGQMQVLITRLIKAFLDSNGPSSSDVDCLLPKVAGQALVMLSLENSHNCFV ILKEPEFINKLKNMILIHDDKYIYVAASLLRNMCLHAQPELTELDLKELSQTLREVLERI MDAEGAELEILIGLSSQICKLIPEEFSQQLEHGQIKRRFIKRLVDTLNANMNPSSHCPGI RRVVLEQSIYMMEYNSHYANCFNEYQMMDALSIVELTPSRAENYMVFLGDTGFMECNTPL SALADRAKELMGRQWLQGINSAN

Transcript Sequence

Transcript ID	Os07t0654700-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:27501837:27507177:1 gene:Os07g0654700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to BLE2 protein. (Os07t0654700-00)
Sequence	ATGGCAAGGCCGTCTCCCGTTGAGGCAAGCGGTGGTCCGGTGATGGGAGACATCACCGGC GGCGGTGGAGAGCTTCGAGTCCAGATAGCAGCCAACTCCGGCGGGCAAGGTGGCAAGGTC GTCGGCGCCGCGCCGGAGAAGTGTCTGAATCGCTTCGTCCGCGTGGTGGCGCTGATGGAG AGGACGGGCAACGCCCTCGGCACGCTGGCCTTCACCTGGGCTACCGTCATCCTCCTCGGC GGCTACCCCACCGTGCTTGACTCGAAGCCGAAGAACAATAGCGACTATTGGTTCACGACA GTCATCGTATTCATAGAAGCCGCAAGGATGTTCAGCAGCGACAAATCCGATTATCAGTTG TTCTTCCGAGCAAGAGGTGCTTTCAGATTCCTTGGAAGCAGTGGACTGATTGCAATCGTA TTCTTTTGGGATGCATACGCAATGCTGGGCATGGTTGCTTCGAACTTGCCTGCCTGGGCA CACAACTTACTTTCAATCTTGTTAATACTGGTACCACTTGCGATTGGCCAGCTTCTAAGA GCAGCTCGAAGACCGACCAGTAAGTTTAACTGGCTGTGGCCTGCGATCTGTCTGGTCGCA ATCCTATTGCTAGCTTTTCCAGTACTTGTATATTACGACCCGCGAATGCACAAAATCAAT TTCATAAACCGATTGACCGTGTGGATACCGTACATATTTCTCTCTGCGATTGTGCTCCTA GTAACGATCAGCAGGCTGCAGTACCCAATTATCACAAACCTAGTGCACGGTGCTCTGGGC AGCAAGCATGCATTTTGGAGTCGGTTTATTCTAATTTCATGCATCTTTGCTGCAATAGTG ATGCTGGTTGTCATGGTTGATCCAGAGTGTCGATTAATTATGATCGCGATCGCAATCATA CTGTCATTTGGCAACTTACATATCCCAGCAGCACTCATGCGTGTCAACCTCGCGGGGATG CGCCTTGCAAAACATAACTACTTCGGTGTTGATGACCGACAAAATCTTGGTGAATCTCTA ACCATATTCTATAGCATGGTGCTTGGCCAAGGAATACTTTACATCGTTGCAGGCATACTG GAGGTCTTCTCGTTCATCCCTCGGAGAACCCTCGTCCGCCGTGGTGGATTCACAGGCCAA TGGGGAGTTGAATCTGTCAATCTATACTACACATACGCCTTCGAGAAAAACATGGAAGGA GGTGTATTTGCTGCAAAGAGGATCAGCCTCAGCAACTTTGCCATGGATTCTATAAATTCT GACTTGTCCAAGAAACAGCTGTATGGGATCTGGATGATGCACATTTTTCTGCAGAGAGAT CCGACCAGGGCACAGCTACTGGAGAAACTGACCACTTCAACGCAGACCATGGCTAGGTTA ATCAGTATGCTGGGCTGGACTAGCAGAAATGATCATACAACTATCAGGTTATATGCCGCC AAGGTAACTGCCGAGCTTGCAAAGAGCCTCCGAGTTGTAACTGTCCCTGGGACGATGTAC CTTGTTTCTACACTCCTGGATACTGACAGAAAACCAAAAAGAAGACACCCGCTTCTGGAT GAAGATGATGATCGAGATCCTTTATTTGTTGATACAGTAGAAAGTCAGGAGAAAAGTCTG GATGCAGCTGGTGATCAAGGGCAAAGACAAGGGTCAGCTGGGGACACTGATATCATGCTG AAAACACCAACCCGATCAACGCACATGAACAACCCAAGATCCACATACAAATGCTGGGAA TCCACATACAAATGCTGGGAGAGGATATCAGAGTACCAGTCAATTCCCAAGGAGCGACCA TTAACAGACGATGATCTTCTCCCTGCACTAGGCATGTCAATTGTTTATAGCCTTGCTGGT TGTGATCAAAATAACTGTGTGGAAATCGACAAAGTAACTGACCTGATCCCAAAAATCATT GGATTCACAAGCTTCAGAAGCGCAACGTTAAATTCCGAAGCACAACAGAAGGTTCTCATA AAGTTATCACTGCAGGCGCTGCAGAGGCTCACAAGCATTGAAGGGGAAATTGGCATGACA CTGCGGTACAAGATAACAAAACATCCCTTCTTACTGCGAAATCTTGCAGAGATCTTGAGA GACAGCAGCAGTAGCAATCAAGAACTAAGGAGGCTCGTGGCAGGAATCCTTAGAAATCTT GCCATTGACAGAGACACAAGGCAGGAGATTGGACAAATGCAAGTGCTCATTACCAGGCTG ATCAAAGCATTCCTCGATTCCAACGGACCATCTAGTTCAGATGTTGATTGCTTGCTGCCA AAGGTCGCTGGGCAAGCACTGGTAATGCTGTCATTAGAAAATTCACATAACTGCTTCGTT ATATTGAAGGAACCAGAGTTTATTAATAAACTAAAAAATATGATACTAATCCATGATGAT AAATACATATATGTGGCAGCAAGCCTGTTGCGTAATATGTGCCTGCACGCTCAACCCGAG CTCACAGAATTAGACCTAAAGGAACTATCTCAGACCTTGCGAGAGGTGTTGGAAAGAATA ATGGACGCTGAAGGGGCGGAACTAGAAATCCTGATTGGCCTTAGTTCACAGATATGCAAA CTCATTCCTGAAGAATTTTCCCAACAGCTAGAGCATGGACAGATTAAGCGGAGATTCATT AAGAGGCTAGTGGACACACTGAATGCAAACATGAACCCAAGTTCTCATTGCCCTGGGATC CGGAGGGTGGTACTTGAGCAATCCATATACATGATGGAGTACAATTCTCACTATGCCAAT TGTTTCAATGAATACCAGATGATGGACGCACTGTCAATTGTAGAATTGACGCCCTCAAGG GCTGAGAATTACATGGTTTTCTTGGGTGACACAGGTTTCATGGAATGTAACACACCTCTC TCTGCCCTAGCGGACAGGGCAAAAGAACTGATGGGTCGTCAGTGGCTGCAAGGTATCAAC AGTGCCAATTGAAAAAAAATATAAAATGATTTTG