Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0647900-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:27055343:27059048:1 gene:Os07g0647900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 57 description:DEAD-like helicase, N-terminal domain containing protein. (Os07t0647900-01)
Sequence	ATGGAGAAGGCGAAGCTCTCGTCGGCGCTCTTCGCCGGCACGCACTTCGACCGCAAGCGC TTCGCCGGCGACTTCGCCCGGTTCCGGCAAGGCCCGCCTGCCCCAGACGTGGCCTCCGCC GCCGCGCCGTCGCCGGAGAAGAAGCGGAAGCGCCAGAGCAAGGCCAAGGCGAAGAAGAGC AAGAAGAGGCGGGCGGAAGGCGCCGACTCTGCTTCCGATGCTGTGGAAGGGTTCAGTGTG TTCAAGGGATTGGCAGCAAAGAAGGATGAGGACGATTCGGAGAAGAAGGTCGAGACTGGT AAGAGTGAGGACTCGGAGGTTGTAAGGCGGAGGAAGGAAGTCGAGAGAGAAATCGAGAGA GCGGCAATACTACGGAAGAAGTTTGATATTCACATTTCAGGACAAAATGTTCCAGCACCG CTAGAGAACTTTGAAGAACTGGTTTCAAGGTATGGTTGCGACTCATATTTGGTTGGAAAC TTGTCAAAACTTGGATTTCAAGAACCTACACCTATCCAAAGGCAGGCCATTCCAATTCTT CTATCCGGGAGAGAGTGCTTTGCCTGTGCACCTACAGGTTCTGGCAAGACTTTGGCTTTC TTGTTCCCAATCCTTATGAAAATCAAGCCAGGATCTAAAGAGGGTGTTAAAGCTGTGATT CTTTGCCCAACAAGGGAATTGGCAGCACAAACCACAAGAGAGTGCAAGAAGTTAGCAAAA GGAAGAAAGTTTTATATTAAACTAATGACAAAAGATCTATCAAAATCTGGGAATTTCAAG GATATGCATTGTGACATCCTGATCTCCACCCCACTTCGTCTGGACCACGCTGTACAAAAA AGAGACCTTGATTTAAGTAGAGTGGAATACCTTGTCTTGGATGAATCTGATAAACTTTTT GAGCTTGGATTTGTTGAAGTGATTGATTCAGTTGTCAAAGCCTGCTCGAATCCTTCAATA ATTCGATCTCTGTTTAGTGCCACATTGCCTGATTCAATAGAAACGCTTGCACGCACGATA ATGCACGATGCTGTTCGAGTCATCGTGGGAAGAAAGAATTCAGCCTCTTCACTGATTAAG CAAAAGTTGATTTTCGCTGGAACTGAGAAGGGGAAGTTGCTAGCTCTTCGCCAAAGCTTT GCAGAATCTCTCAATCCTCCAGTATTGATCTTTGTTCAAAGCAAAGAGAGGGCAAAAGAA CTTTACAAAGAACTGGCATTTGATGACGTAAGAGCTGATGTAATTCATGCGGACCTTGAT GAGGAGCAGCGTCAAGATGCTGTTGACAACTTGAGAGCCGGAAAGACTTGGGTACTGATA GCTACCGAAGTCATTGCCCGGGGAATGGATTTCAAAGGTGTTAACTGCGTTATCAACTAT GATTTTCCAGAGTCAGCTTCTGCCTATATTCACCGAATAGGACGATCTGGAAGAGCAGGT AGATCAGGGGAGGCCATCACATTCTTCACCGAGGAGGATAAGCCATTCTTGCGGAACATC GCAAATGTGCTGATATCTTCAGGCTGCGAGGTTCCTTCTTGGATAAAGGCATTGCCTAAA CTCAAGCGCAAGAAGCACAGGGTGAACCGGGATCCCATCTCCACATTACCAGACGAAGAT TGA

Peptide Sequence

PEP ID	Os07t0647900-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:27055343:27059048:1 gene:Os07g0647900 transcript:Os07t0647900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 57 description:DEAD-like helicase, N-terminal domain containing protein. (Os07t0647900-01)
Sequence	MEKAKLSSALFAGTHFDRKRFAGDFARFRQGPPAPDVASAAAPSPEKKRKRQSKAKAKKS KKRRAEGADSASDAVEGFSVFKGLAAKKDEDDSEKKVETGKSEDSEVVRRRKEVEREIER AAILRKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPIL LSGRECFACAPTGSGKTLAFLFPILMKIKPGSKEGVKAVILCPTRELAAQTTRECKKLAK GRKFYIKLMTKDLSKSGNFKDMHCDILISTPLRLDHAVQKRDLDLSRVEYLVLDESDKLF ELGFVEVIDSVVKACSNPSIIRSLFSATLPDSIETLARTIMHDAVRVIVGRKNSASSLIK QKLIFAGTEKGKLLALRQSFAESLNPPVLIFVQSKERAKELYKELAFDDVRADVIHADLD EEQRQDAVDNLRAGKTWVLIATEVIARGMDFKGVNCVINYDFPESASAYIHRIGRSGRAG RSGEAITFFTEEDKPFLRNIANVLISSGCEVPSWIKALPKLKRKKHRVNRDPISTLPDED

Transcript Sequence

Transcript ID	Os07t0647900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:27055343:27059048:1 gene:Os07g0647900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 57 description:DEAD-like helicase, N-terminal domain containing protein. (Os07t0647900-01)
Sequence	GAACGCTGCAAGTGGGACCCACCTAGGGTTTTAAGAGGAGGAGATTCTCGTCGGCGGCGG CGGCGGGCAAAGGTTAGCCATGGAGAAGGCGAAGCTCTCGTCGGCGCTCTTCGCCGGCAC GCACTTCGACCGCAAGCGCTTCGCCGGCGACTTCGCCCGGTTCCGGCAAGGCCCGCCTGC CCCAGACGTGGCCTCCGCCGCCGCGCCGTCGCCGGAGAAGAAGCGGAAGCGCCAGAGCAA GGCCAAGGCGAAGAAGAGCAAGAAGAGGCGGGCGGAAGGCGCCGACTCTGCTTCCGATGC TGTGGAAGGGTTCAGTGTGTTCAAGGGATTGGCAGCAAAGAAGGATGAGGACGATTCGGA GAAGAAGGTCGAGACTGGTAAGAGTGAGGACTCGGAGGTTGTAAGGCGGAGGAAGGAAGT CGAGAGAGAAATCGAGAGAGCGGCAATACTACGGAAGAAGTTTGATATTCACATTTCAGG ACAAAATGTTCCAGCACCGCTAGAGAACTTTGAAGAACTGGTTTCAAGGTATGGTTGCGA CTCATATTTGGTTGGAAACTTGTCAAAACTTGGATTTCAAGAACCTACACCTATCCAAAG GCAGGCCATTCCAATTCTTCTATCCGGGAGAGAGTGCTTTGCCTGTGCACCTACAGGTTC TGGCAAGACTTTGGCTTTCTTGTTCCCAATCCTTATGAAAATCAAGCCAGGATCTAAAGA GGGTGTTAAAGCTGTGATTCTTTGCCCAACAAGGGAATTGGCAGCACAAACCACAAGAGA GTGCAAGAAGTTAGCAAAAGGAAGAAAGTTTTATATTAAACTAATGACAAAAGATCTATC AAAATCTGGGAATTTCAAGGATATGCATTGTGACATCCTGATCTCCACCCCACTTCGTCT GGACCACGCTGTACAAAAAAGAGACCTTGATTTAAGTAGAGTGGAATACCTTGTCTTGGA TGAATCTGATAAACTTTTTGAGCTTGGATTTGTTGAAGTGATTGATTCAGTTGTCAAAGC CTGCTCGAATCCTTCAATAATTCGATCTCTGTTTAGTGCCACATTGCCTGATTCAATAGA AACGCTTGCACGCACGATAATGCACGATGCTGTTCGAGTCATCGTGGGAAGAAAGAATTC AGCCTCTTCACTGATTAAGCAAAAGTTGATTTTCGCTGGAACTGAGAAGGGGAAGTTGCT AGCTCTTCGCCAAAGCTTTGCAGAATCTCTCAATCCTCCAGTATTGATCTTTGTTCAAAG CAAAGAGAGGGCAAAAGAACTTTACAAAGAACTGGCATTTGATGACGTAAGAGCTGATGT AATTCATGCGGACCTTGATGAGGAGCAGCGTCAAGATGCTGTTGACAACTTGAGAGCCGG AAAGACTTGGGTACTGATAGCTACCGAAGTCATTGCCCGGGGAATGGATTTCAAAGGTGT TAACTGCGTTATCAACTATGATTTTCCAGAGTCAGCTTCTGCCTATATTCACCGAATAGG ACGATCTGGAAGAGCAGGTAGATCAGGGGAGGCCATCACATTCTTCACCGAGGAGGATAA GCCATTCTTGCGGAACATCGCAAATGTGCTGATATCTTCAGGCTGCGAGGTTCCTTCTTG GATAAAGGCATTGCCTAAACTCAAGCGCAAGAAGCACAGGGTGAACCGGGATCCCATCTC CACATTACCAGACGAAGATTGAGTTTCCCTGTAACGTTTCTAGATGAAGATTGAGTTTCC CTGTAACGTTTCTAGATGGCACCTTGGCTTCAGTTTTCCTGTTTGAATGCCAGAAACTGC TGCCTCTATTAGTTTTGTTGACTGAAGCCTGAGATGAGAATACACTTGCCTTTTGTTATT TACAGTTTTGACTGATCAATTGAATAGATTATTTCTGAATTTACAATT