Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0644300-02
CDS Infomation	cds chromosome:IRGSP-1.0:7:26819447:26824258:-1 gene:Os07g0644300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XAB2 description:Similar to XPA-binding protein 2 (Adapter protein ATH-55). (Os07t0644300-02)
Sequence	ATGCCGTCGCCTGCGGGGGGTCCGGTGGCCGTGGCGGCGGCGTCTGCGGCGGCGGCGGAG GCGCTGGGGATCTCGCCGGAGATGTACCCGACGGAGGACGACCTGGCGTACGAGGAGGAG ATCCTGCGCGAGCCGTTCAAGCTCAAGGGGTGGTGGCGCTACCTCGTCGCCCGCGCCGCC GCGCCGTTCGCCAAGCGCGCCGTCATCTACGAGCGCGCGCTCAAGGCGCTCCCGGGGAGC TACAAGCTGTGGCACGCCTACCTCCGCGAGCGCCTCGACCACGCGCGCCCGCACCCCATC TCCCACCACGCCTACGCCTCCCTCAACAACACCTTCGAGCGCGCCCTCGCCACCATGCAC AAGATGCCCCGCGTCTGGGTGCTCTACCTCACCTCGCTGCTCGACCAGCGCCTGCTCACG CGCGCGCGCCGCGCCTTCGACCGCGCGCTGCGCGCGCTCCCCGTCACGCAGCACGACCGC ATCTGGCCGCTCTACCTCCGCCTCGCCTCGCTCCCGGCCTGCCCCGTCGAGACCTCGCTC CGCGTCTTCCGACGATACCTCCAGTACGACCCCTCCCACGCTGAGGACTTCATCGATTTC CTCATCTCCGCAAACCGCTGGCAGGAGGCCGCCGACCGCCTCGCGTCCGTGCTCAACGAT GACGGCTTCCGCTCCGTCAAGGGTAAGACCCAGCACCAGCTCTGGCTTGAGCTCTGCGAA ATCCTCACCAAGCATGCCGATGAGGTTGCGGGGCTCAAGGTGGACGCTATACTGCGGGGC GGCATTCGCAAGTTCACCGATGAGGTTGGCAAGCTGTGGACCTCCCTGGCCGATTACTAC GTCAGAAGAACCTTGTATGAGAAGGCGAGGGATGTCTTCGAAGAGGGGGTTGCTTCGGTG ATGACGGTGCAGGAATTCAGCGTGGTGTTTGAGGCGTACACACAATTCGAGCAGAGTATG CTTGCGGCAAAGCTGGAGGCAGCCGAGGAGGAGGGTGCGGGGAGTGAGGGGGAAGAGGAA GCGGGCAGGAAGAATGGGATGGACAAGCTGTCGAAGAAATTCCTCGCAGATTGCTGGCTG AATGATGAGGATGATACTGATTTGAGGCTGGCAAGGTTTGAGCGGCTGTTGGATCGCCGG CCAGAGCTCCTCAGCAGTGTCCTGCTGCGACAGAATCCGCATAATGTGGAGGAATGGCAC AGGAGGGTGAAACTTTTTGAGAAGGATCCTACAAGGCAAGTAGCCACATATGTTGAAGCT GTGAAAACCGTAGACCCTATGAAGGCAGCTGGAAAACCACATACTCTATGGGTGGCATTC GCAAAGATGTATGAGAAACATAATCGTCTAGATAGTGCTGAAGAGATCTTTAAAAAAGCA ACACAGGTGAACTACAAGGCAGTTGACCACTTAGCCAGTATTTGGTGTGAGTGGGCAGAG ATGGAGCTGAGGCACAGTAATTTTGACAAGGCTATTGAGCTGATGAGGCAAGCTACTGCA GAACCCTCTGTTGAGGTTAAGAGGCGAGCTGCTGCTGAGGGGGATGAACCTGTCCAATTG AAAGTACATAAATCCCTGAAACTGTGGAGCTTCTATGTGGACCTGGAGGAAAGTCTTGGA ACATTGGAATCAACTCGTGCAGTTTATGAGAGAATATTGGATTTACGAATTGCCACTCCC CAAATAGTTCTCAATTATGCATATCTTCTTGAGGAAAACAAGTATTTCGAAGATGCGTTT AAAGTGTATGAGCGTGGTGTGAAAATTTTTAAATATCCCCATGTTAAAGACATTTGGGTG ACCTACCTCACAAAGTTTGTAAGAAGGTATCAGAGAAGCAAGTTAGAGCGGGCAAGAGAA CTGTTCGATGAAGCTGTCAAACAGGCTCCTCCACAAGAAAAGAAGGTATTGTATTTGCAG TATGCTAAGCTGGAGGAAGACTATGGCCTTGCGAAACGTGCAATGAATGTATACGACGAA GCTGTAAGGGCTGTTCCTAACAGCGAAAAGATGAGTATGTACGAAATATATATTGCACGG GCTGCGGAGCTATTTGGTGTTCCAAGAACAAGACAGATATATGAGCAAGCAATTGAATCT GGACTCCCAGACAGAGATGTCATGACAATGTGCATGAAATTTGCAGAACTTGAAAGAAAC CTTGGAGAAATTGATCGTGCCCGTGCCATTTATGTCCACGCATCCAACTATGCTGATCCA AACTCTCATCCTGAATTTTGGAATAAATGGAATGAATTTGAGATTCAGCATGGTAACGAA GATACATTCAGGGAGATGCTTCGCATCAAGCGTACTGTGGCTGCTAGCCGCAGTCAGACT CATTTCATACTCCCAGAGTACTTGATGCAGAGGGACCAGAGGCTGAACCTCGATGAGGCA GTTGACACTCTGAAACGAGCCGGTGTTCCTGAGGATGAGATGGCTAACCTAGAAAGGCAA CTAGCGCCAGGACCTTCCACGGCTCCACCAGCTCCAAGCACTGCTACTGCTCCTGCTAAC CGGATGATGAACTTTGTCAGTGCTGGAGTGCAGGCACAGGCTGAGAGCAGCAGCAGGCAA CAACAGGCTGCTGCTACTAACAATGAGGACATTGAGCTGCCCGATGAGAGCGACGAGGAG GAAGACGATGTCCAAATTGCGGAGAAGAGTGTTCCCGCTGCGGTGTTTGGAGAGCTCGGC AAGAGAGCTGCAGAGAACAGGGAGGAGGAAAGCTCTGGTGCCCAGGAGAATGAGCAGCTT GGCGCCCTTGAGAGGATTAAGCGAAGGCGTCAATGA

Peptide Sequence

PEP ID	Os07t0644300-02
PEP Infomation	pep chromosome:IRGSP-1.0:7:26819447:26824258:-1 gene:Os07g0644300 transcript:Os07t0644300-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XAB2 description:Similar to XPA-binding protein 2 (Adapter protein ATH-55). (Os07t0644300-02)
Sequence	MPSPAGGPVAVAAASAAAAEALGISPEMYPTEDDLAYEEEILREPFKLKGWWRYLVARAA APFAKRAVIYERALKALPGSYKLWHAYLRERLDHARPHPISHHAYASLNNTFERALATMH KMPRVWVLYLTSLLDQRLLTRARRAFDRALRALPVTQHDRIWPLYLRLASLPACPVETSL RVFRRYLQYDPSHAEDFIDFLISANRWQEAADRLASVLNDDGFRSVKGKTQHQLWLELCE ILTKHADEVAGLKVDAILRGGIRKFTDEVGKLWTSLADYYVRRTLYEKARDVFEEGVASV MTVQEFSVVFEAYTQFEQSMLAAKLEAAEEEGAGSEGEEEAGRKNGMDKLSKKFLADCWL NDEDDTDLRLARFERLLDRRPELLSSVLLRQNPHNVEEWHRRVKLFEKDPTRQVATYVEA VKTVDPMKAAGKPHTLWVAFAKMYEKHNRLDSAEEIFKKATQVNYKAVDHLASIWCEWAE MELRHSNFDKAIELMRQATAEPSVEVKRRAAAEGDEPVQLKVHKSLKLWSFYVDLEESLG TLESTRAVYERILDLRIATPQIVLNYAYLLEENKYFEDAFKVYERGVKIFKYPHVKDIWV TYLTKFVRRYQRSKLERARELFDEAVKQAPPQEKKVLYLQYAKLEEDYGLAKRAMNVYDE AVRAVPNSEKMSMYEIYIARAAELFGVPRTRQIYEQAIESGLPDRDVMTMCMKFAELERN LGEIDRARAIYVHASNYADPNSHPEFWNKWNEFEIQHGNEDTFREMLRIKRTVAASRSQT HFILPEYLMQRDQRLNLDEAVDTLKRAGVPEDEMANLERQLAPGPSTAPPAPSTATAPAN RMMNFVSAGVQAQAESSSRQQQAAATNNEDIELPDESDEEEDDVQIAEKSVPAAVFGELG KRAAENREEESSGAQENEQLGALERIKRRRQ

Transcript Sequence

Transcript ID	Os07t0644300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:26819447:26824258:-1 gene:Os07g0644300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XAB2 description:Similar to XPA-binding protein 2 (Adapter protein ATH-55). (Os07t0644300-02)
Sequence	GGCGCAAATCCTCCTCGCCGCGGCGGAGCACTAAACCCTAGCGAGAGATGCCGTCGCCTG CGGGGGGTCCGGTGGCCGTGGCGGCGGCGTCTGCGGCGGCGGCGGAGGCGCTGGGGATCT CGCCGGAGATGTACCCGACGGAGGACGACCTGGCGTACGAGGAGGAGATCCTGCGCGAGC CGTTCAAGCTCAAGGGGTGGTGGCGCTACCTCGTCGCCCGCGCCGCCGCGCCGTTCGCCA AGCGCGCCGTCATCTACGAGCGCGCGCTCAAGGCGCTCCCGGGGAGCTACAAGCTGTGGC ACGCCTACCTCCGCGAGCGCCTCGACCACGCGCGCCCGCACCCCATCTCCCACCACGCCT ACGCCTCCCTCAACAACACCTTCGAGCGCGCCCTCGCCACCATGCACAAGATGCCCCGCG TCTGGGTGCTCTACCTCACCTCGCTGCTCGACCAGCGCCTGCTCACGCGCGCGCGCCGCG CCTTCGACCGCGCGCTGCGCGCGCTCCCCGTCACGCAGCACGACCGCATCTGGCCGCTCT ACCTCCGCCTCGCCTCGCTCCCGGCCTGCCCCGTCGAGACCTCGCTCCGCGTCTTCCGAC GATACCTCCAGTACGACCCCTCCCACGCTGAGGACTTCATCGATTTCCTCATCTCCGCAA ACCGCTGGCAGGAGGCCGCCGACCGCCTCGCGTCCGTGCTCAACGATGACGGCTTCCGCT CCGTCAAGGGTAAGACCCAGCACCAGCTCTGGCTTGAGCTCTGCGAAATCCTCACCAAGC ATGCCGATGAGGTTGCGGGGCTCAAGGTGGACGCTATACTGCGGGGCGGCATTCGCAAGT TCACCGATGAGGTTGGCAAGCTGTGGACCTCCCTGGCCGATTACTACGTCAGAAGAACCT TGTATGAGAAGGCGAGGGATGTCTTCGAAGAGGGGGTTGCTTCGGTGATGACGGTGCAGG AATTCAGCGTGGTGTTTGAGGCGTACACACAATTCGAGCAGAGTATGCTTGCGGCAAAGC TGGAGGCAGCCGAGGAGGAGGGTGCGGGGAGTGAGGGGGAAGAGGAAGCGGGCAGGAAGA ATGGGATGGACAAGCTGTCGAAGAAATTCCTCGCAGATTGCTGGCTGAATGATGAGGATG ATACTGATTTGAGGCTGGCAAGGTTTGAGCGGCTGTTGGATCGCCGGCCAGAGCTCCTCA GCAGTGTCCTGCTGCGACAGAATCCGCATAATGTGGAGGAATGGCACAGGAGGGTGAAAC TTTTTGAGAAGGATCCTACAAGGCAAGTAGCCACATATGTTGAAGCTGTGAAAACCGTAG ACCCTATGAAGGCAGCTGGAAAACCACATACTCTATGGGTGGCATTCGCAAAGATGTATG AGAAACATAATCGTCTAGATAGTGCTGAAGAGATCTTTAAAAAAGCAACACAGGTGAACT ACAAGGCAGTTGACCACTTAGCCAGTATTTGGTGTGAGTGGGCAGAGATGGAGCTGAGGC ACAGTAATTTTGACAAGGCTATTGAGCTGATGAGGCAAGCTACTGCAGAACCCTCTGTTG AGGTTAAGAGGCGAGCTGCTGCTGAGGGGGATGAACCTGTCCAATTGAAAGTACATAAAT CCCTGAAACTGTGGAGCTTCTATGTGGACCTGGAGGAAAGTCTTGGAACATTGGAATCAA CTCGTGCAGTTTATGAGAGAATATTGGATTTACGAATTGCCACTCCCCAAATAGTTCTCA ATTATGCATATCTTCTTGAGGAAAACAAGTATTTCGAAGATGCGTTTAAAGTGTATGAGC GTGGTGTGAAAATTTTTAAATATCCCCATGTTAAAGACATTTGGGTGACCTACCTCACAA AGTTTGTAAGAAGGTATCAGAGAAGCAAGTTAGAGCGGGCAAGAGAACTGTTCGATGAAG CTGTCAAACAGGCTCCTCCACAAGAAAAGAAGGTATTGTATTTGCAGTATGCTAAGCTGG AGGAAGACTATGGCCTTGCGAAACGTGCAATGAATGTATACGACGAAGCTGTAAGGGCTG TTCCTAACAGCGAAAAGATGAGTATGTACGAAATATATATTGCACGGGCTGCGGAGCTAT TTGGTGTTCCAAGAACAAGACAGATATATGAGCAAGCAATTGAATCTGGACTCCCAGACA GAGATGTCATGACAATGTGCATGAAATTTGCAGAACTTGAAAGAAACCTTGGAGAAATTG ATCGTGCCCGTGCCATTTATGTCCACGCATCCAACTATGCTGATCCAAACTCTCATCCTG AATTTTGGAATAAATGGAATGAATTTGAGATTCAGCATGGTAACGAAGATACATTCAGGG AGATGCTTCGCATCAAGCGTACTGTGGCTGCTAGCCGCAGTCAGACTCATTTCATACTCC CAGAGTACTTGATGCAGAGGGACCAGAGGCTGAACCTCGATGAGGCAGTTGACACTCTGA AACGAGCCGGTGTTCCTGAGGATGAGATGGCTAACCTAGAAAGGCAACTAGCGCCAGGAC CTTCCACGGCTCCACCAGCTCCAAGCACTGCTACTGCTCCTGCTAACCGGATGATGAACT TTGTCAGTGCTGGAGTGCAGGCACAGGCTGAGAGCAGCAGCAGGCAACAACAGGCTGCTG CTACTAACAATGAGGACATTGAGCTGCCCGATGAGAGCGACGAGGAGGAAGACGATGTCC AAATTGCGGAGAAGAGTGTTCCCGCTGCGGTGTTTGGAGAGCTCGGCAAGAGAGCTGCAG AGAACAGGGAGGAGGAAAGCTCTGGTGCCCAGGAGAATGAGCAGCTTGGCGCCCTTGAGA GGATTAAGCGAAGGCGTCAATGATCTGCCACTGTCAAGATGCCCACACCATTAGCTGGTG CCCTTAACGATGTTGTAGCTGTAACAACTTGTAAACATGATTTTGAGTGGTGTTTTTGCT CTTGTACAAGAATTTACGGGAGTTATTAATCCGTTGTTGATCTGCGACCATTTTTTCGTG TACTAACTATTGGGTACATTCCCCGCTTTTTATTCCCTCTTTTAGGCTAGAAGG