Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0642400-00
CDS Infomation	cds chromosome:IRGSP-1.0:7:26734659:26746290:1 gene:Os07g0642400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to chromatin remodeling complex subunit. (Os07t0642400-00)
Sequence	ATGGCCTCCACCTCCCGCCGCGGCGGCGGCGAGGACGACGACGACGAGCCCTACCTCCTG GGCTTCATCGTCGCCAACGCCGTCGGCCTCCAGTACTACCAGGGCGGCCGAGCCATCACC CGCCGCGAGAGCGTCGGCCTCGTCCGGGAGCCCCACAACCCCCACGACGCCAACGCCATC CGCGTCGACAACGCCCGGGGCGAGAAGATCGGCCACATCGGCCGCCGCGCCGCCGCCGCC CTCGCCCCGCTCCTCGACGCCGGCCACGTCGCCGCCGCCCACGGCATCGTCCCCAAGCCC GCCTCCAAGAGGCTCTACAGCCTCCCCTGCCAGGTCCACCTCTTCGCCCGCCCGCCCCAC GCCGCCCTCGTCGCCGCCGCCCTCGCCGCCTCCGGGATCGACCTCATCCACGTCGACCAC CCCGAGTTCGCCCTCTCCGAGTCCGCCATCGTGCAGGAGCAGCAGACCAAGAGGTCTCGC GGGGATGTCGATAGGCTGTTCTCTCATGTGGGGAAGGGAGGGAGAGCTCGGATTGCGCCC ATGGAGGCGCCGCGGGATGTGGTGGTGTCCGAACTGTTCGAGCACCAGAAGGCGGCGCTG GGGTGGCTGGTGCACCGTGAGGAGTCATGCGACCTTCCACCATTCTGGGAGGAAGATAAT GATGGGGGATTTAAGAATGTTCTTACAAATCAGAAGACGAATGAGAGACCGCCGCCGTTG AAGGGTGGGATTTTCGCTGATGATATGGGGCTAGGGAAGACTCTCACGCTGTTGTCGCTG ATCGGAAGGAGTAAAGCTCGCAATGTAGGTGGGAAGAAGGCTAGAGGGGCGAAAAGGAGG AAGGTTGAGGAGGCGGTGGAGGAGGAGTCAAGAACAACGCTTGTGGTGTGCCCGCCATCG GTGTTCTCATCTTGGGTGACACAACTGGAGGAGCACACGAAAACCGGTAGCTTGAAGGTG TATTTGTACCATGGAGAGCGGACAAAAGAGAAGAAAGAGCTGTTGAAATATGACATTGTG ATTACCACTTATAGCACCTTGGGGCAAGAACTTGAGCAGGAGGGCTCACCGGTAAAGGAA ATTGAATGGTTCCGTGTGATTCTGGATGAGGCCCATGTGATCAAGAACTCTGCAGCACGC CAAACCAAGGCGGTGATTGCTTTGAACGCGGAGAGGCGGTGGGTGGTCACAGGGACGCCC ATTCAGAACAGCTCATTTGATCTTTACCCGCTCATGGCATTTTTGAGATTCCAACCATTC TCAATCAAGAGCTACTGGCAGAGCTTGATCCAGCTCCCCTTAGAGAGAAAGAATAACGGA ATTGGGTTGGCACGATTGCAGAGCCTCCTAGGTGCTATTTCCCTGCGCAGAACCAAAGAG ACAGAGAGTGGTAGCAAAAGCTTGGTCAGCATTCCGCCCAAAACTGTTTTAGCTTGTTAT ATTGAGCTTTCTGCAGAGGAACGTGAGTACTATGACCAGATGGAATTGGAAGGGAAAAAC AAACTGCGGGAGTTTGGTGACAGGGATTCGATTTTGCGTAATTACTCAACTGTGCTTTAT TTCATTCTGAGGCTCCGCCAGCTCTGCAATGACATAGCACTATGCCCATTAGACCTGAAA TCATGGCTTCCTGGCAGTGGCAGCTCCCTTGAAGATGTGTCTAAAAACCCAGAGCTGTTG AAGAAGCTGGCCTCATTGGTTGACGATGGAGATGACTTCGAATGTCCGATTTGTCTCGCT CCACCAGCCAAAACCGTCATAACGAGCTGCACGCACATATACTGCCAGACTTGCATCATG AAAATCCTCAAGAGCTCTAGTTCCCGCTGTCCAATATGCCGGCGCTCGCTATGCAAAGAA GACCTCTTTATTGCGCCAGAGATTAAACATCCCGATGAGGATTCCTCAGTCAATCTTGAT AGACCTCTTTCTTCCAAGGTGCAAGCCTTGCTGAAACTACTGAGGCGTTCACAGAGCGAA GACCCTTTGTCAAAGTCTGTTATTTTCTCTCAGTTCAGGAAGATGCTGATCTTGCTTGAA GGGCCACTTAAAGCAGCAGGCTTTAACATACTACGACTCGACGGCTCTATGACGGCGAAG AAGAGGTCAGAGGTTATCCGCCAATTCGGATGCGTTGGCCCTGATTCTCCGACCGTGCTG CTGGCCAGCCTGAAGGCTGCGGGAGCCGGCGTGAACCTGACCGCGGCATCAACGGTGTAC CTCTTCGACCCTTGGTGGAACCCTGGGGTGGAGGAGCAGGCCATGGACAGGGTGCACCGG ATCGGGCAGACCAAGGAGGTGAAAGTGAACCCGATCCGGATCATCCAATCGAATAGCAAT CAGCTCCGGTTCAGGCAGCCACAAATCCTCCGCTCCAATGGCGAGATGATCGTGAGATAG

Peptide Sequence

PEP ID	Os07t0642400-00
PEP Infomation	pep chromosome:IRGSP-1.0:7:26734659:26746290:1 gene:Os07g0642400 transcript:Os07t0642400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to chromatin remodeling complex subunit. (Os07t0642400-00)
Sequence	MASTSRRGGGEDDDDEPYLLGFIVANAVGLQYYQGGRAITRRESVGLVREPHNPHDANAI RVDNARGEKIGHIGRRAAAALAPLLDAGHVAAAHGIVPKPASKRLYSLPCQVHLFARPPH AALVAAALAASGIDLIHVDHPEFALSESAIVQEQQTKRSRGDVDRLFSHVGKGGRARIAP MEAPRDVVVSELFEHQKAALGWLVHREESCDLPPFWEEDNDGGFKNVLTNQKTNERPPPL KGGIFADDMGLGKTLTLLSLIGRSKARNVGGKKARGAKRRKVEEAVEEESRTTLVVCPPS VFSSWVTQLEEHTKTGSLKVYLYHGERTKEKKELLKYDIVITTYSTLGQELEQEGSPVKE IEWFRVILDEAHVIKNSAARQTKAVIALNAERRWVVTGTPIQNSSFDLYPLMAFLRFQPF SIKSYWQSLIQLPLERKNNGIGLARLQSLLGAISLRRTKETESGSKSLVSIPPKTVLACY IELSAEEREYYDQMELEGKNKLREFGDRDSILRNYSTVLYFILRLRQLCNDIALCPLDLK SWLPGSGSSLEDVSKNPELLKKLASLVDDGDDFECPICLAPPAKTVITSCTHIYCQTCIM KILKSSSSRCPICRRSLCKEDLFIAPEIKHPDEDSSVNLDRPLSSKVQALLKLLRRSQSE DPLSKSVIFSQFRKMLILLEGPLKAAGFNILRLDGSMTAKKRSEVIRQFGCVGPDSPTVL LASLKAAGAGVNLTAASTVYLFDPWWNPGVEEQAMDRVHRIGQTKEVKVNPIRIIQSNSN QLRFRQPQILRSNGEMIVR

Transcript Sequence

Transcript ID	Os07t0642400-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:26734659:26746290:1 gene:Os07g0642400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to chromatin remodeling complex subunit. (Os07t0642400-00)
Sequence	ATGGCCTCCACCTCCCGCCGCGGCGGCGGCGAGGACGACGACGACGAGCCCTACCTCCTG GGCTTCATCGTCGCCAACGCCGTCGGCCTCCAGTACTACCAGGGCGGCCGAGCCATCACC CGCCGCGAGAGCGTCGGCCTCGTCCGGGAGCCCCACAACCCCCACGACGCCAACGCCATC CGCGTCGACAACGCCCGGGGCGAGAAGATCGGCCACATCGGCCGCCGCGCCGCCGCCGCC CTCGCCCCGCTCCTCGACGCCGGCCACGTCGCCGCCGCCCACGGCATCGTCCCCAAGCCC GCCTCCAAGAGGCTCTACAGCCTCCCCTGCCAGGTCCACCTCTTCGCCCGCCCGCCCCAC GCCGCCCTCGTCGCCGCCGCCCTCGCCGCCTCCGGGATCGACCTCATCCACGTCGACCAC CCCGAGTTCGCCCTCTCCGAGTCCGCCATCGTGCAGGAGCAGCAGACCAAGAGGTCTCGC GGGGATGTCGATAGGCTGTTCTCTCATGTGGGGAAGGGAGGGAGAGCTCGGATTGCGCCC ATGGAGGCGCCGCGGGATGTGGTGGTGTCCGAACTGTTCGAGCACCAGAAGGCGGCGCTG GGGTGGCTGGTGCACCGTGAGGAGTCATGCGACCTTCCACCATTCTGGGAGGAAGATAAT GATGGGGGATTTAAGAATGTTCTTACAAATCAGAAGACGAATGAGAGACCGCCGCCGTTG AAGGGTGGGATTTTCGCTGATGATATGGGGCTAGGGAAGACTCTCACGCTGTTGTCGCTG ATCGGAAGGAGTAAAGCTCGCAATGTAGGTGGGAAGAAGGCTAGAGGGGCGAAAAGGAGG AAGGTTGAGGAGGCGGTGGAGGAGGAGTCAAGAACAACGCTTGTGGTGTGCCCGCCATCG GTGTTCTCATCTTGGGTGACACAACTGGAGGAGCACACGAAAACCGGTAGCTTGAAGGTG TATTTGTACCATGGAGAGCGGACAAAAGAGAAGAAAGAGCTGTTGAAATATGACATTGTG ATTACCACTTATAGCACCTTGGGGCAAGAACTTGAGCAGGAGGGCTCACCGGTAAAGGAA ATTGAATGGTTCCGTGTGATTCTGGATGAGGCCCATGTGATCAAGAACTCTGCAGCACGC CAAACCAAGGCGGTGATTGCTTTGAACGCGGAGAGGCGGTGGGTGGTCACAGGGACGCCC ATTCAGAACAGCTCATTTGATCTTTACCCGCTCATGGCATTTTTGAGATTCCAACCATTC TCAATCAAGAGCTACTGGCAGAGCTTGATCCAGCTCCCCTTAGAGAGAAAGAATAACGGA ATTGGGTTGGCACGATTGCAGAGCCTCCTAGGTGCTATTTCCCTGCGCAGAACCAAAGAG ACAGAGAGTGGTAGCAAAAGCTTGGTCAGCATTCCGCCCAAAACTGTTTTAGCTTGTTAT ATTGAGCTTTCTGCAGAGGAACGTGAGTACTATGACCAGATGGAATTGGAAGGGAAAAAC AAACTGCGGGAGTTTGGTGACAGGGATTCGATTTTGCGTAATTACTCAACTGTGCTTTAT TTCATTCTGAGGCTCCGCCAGCTCTGCAATGACATAGCACTATGCCCATTAGACCTGAAA TCATGGCTTCCTGGCAGTGGCAGCTCCCTTGAAGATGTGTCTAAAAACCCAGAGCTGTTG AAGAAGCTGGCCTCATTGGTTGACGATGGAGATGACTTCGAATGTCCGATTTGTCTCGCT CCACCAGCCAAAACCGTCATAACGAGCTGCACGCACATATACTGCCAGACTTGCATCATG AAAATCCTCAAGAGCTCTAGTTCCCGCTGTCCAATATGCCGGCGCTCGCTATGCAAAGAA GACCTCTTTATTGCGCCAGAGATTAAACATCCCGATGAGGATTCCTCAGTCAATCTTGAT AGACCTCTTTCTTCCAAGGTGCAAGCCTTGCTGAAACTACTGAGGCGTTCACAGAGCGAA GACCCTTTGTCAAAGTCTGTTATTTTCTCTCAGTTCAGGAAGATGCTGATCTTGCTTGAA GGGCCACTTAAAGCAGCAGGCTTTAACATACTACGACTCGACGGCTCTATGACGGCGAAG AAGAGGTCAGAGGTTATCCGCCAATTCGGATGCGTTGGCCCTGATTCTCCGACCGTGCTG CTGGCCAGCCTGAAGGCTGCGGGAGCCGGCGTGAACCTGACCGCGGCATCAACGGTGTAC CTCTTCGACCCTTGGTGGAACCCTGGGGTGGAGGAGCAGGCCATGGACAGGGTGCACCGG ATCGGGCAGACCAAGGAGGTGAAAGTGAACCCGATCCGGATCATCCAATCGAATAGCAAT CAGCTCCGGTTCAGGCAGCCACAAATCCTCCGCTCCAATGGCGAGATGATCGTGAGATAG