Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0636200-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:26416970:26429287:1 gene:Os07g0636200 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD-like helicase, N-terminal domain containing protein. (Os07t0636200-01);Similar to chromatin remodeling complex subunit. (Os07t0636200-02);Similar to chromatin remodeling complex subunit. (Os07t0636200-03)
Sequence	ATGATCCGTTGGGTACAAGGAAGAAGAGGATACTACTCTCCAAGTAGCGAAAATCCACAA ATTCCCTCTCCGGCTCGCGCGCGCGCTCTCAATTTTTTGGGGGAAGAGAAGATCTCCCCT TGGAGGGAACCCCGCCCAAGAATGGCGGGTCTCGGCGGCGGATGGGGCGGCGGGTACGAC GACGACGACGACTGGGGGCTGAGCGCGGAGCAGCTCGACCAGCTCGAGCGGGACGCCTAC CGCAAGCTCGCCGAGCGCAAGGCCTCCTCCTCCGCCGCCTCCACCGCCACCTCGCCGCTC CCCTCCGCGGCCTACTCGCCGGTCAAGAACAGCCACCACCACCCGGCATCCAGGGTTTCC CAGGAGTCTTGCTTCGGCAAGGTAGAATCACTTTCTCCTTCTCGGCTTAGTCAACCAAAT GCATCGGGAAATGCAGTTAATAATAGTCAGGGCAATATGTCTAAGGTATCAGTACATCTT TTCCTTCATTCTACTGGTGTGATCGCAGCGAAGTTCCAGTACCACCAGAAACTTGTGGAT GCAGTTCACAAGATCCCCAAAGCCAGCTGGAACGGGAAGGAGAGGGTATGGATGTTCCCA CACTCATCATTATCAGTAGCAGAGGAAGTTCTTAGTACAGTACCTGGAATAGCTGTTGAG GTCCAAAAACTGGATCCGCTGGTTAAGCGCGCACTAACTGCTTCTTTATATGCCGGAGAT CTTCGAGATTTGTATGGCAAGATTCCAACTGATGTTGAGTCAAAGCTTATGCCGTTTCAG CGTGAAGGTGTCAGGTTTGCTTTACAGCATGGTGCCAGGACCCTGATAGCAGATGAAATG GGTCTTGGCAAGACATTACAGGCAATTGCTGTTGCTTCTTGCCTTCATGATGCCTGGCCA GTTCTTGTAATCTCTCCATCATCCTTGCGATTACATTGGGCTTCTATGATTCAGCATTGG CTTAACATCCCCACGGAAGATATCTTGGTGGTGCTACCACAAACTGGAGGATCAAATAAA GCAGGATACAGATTGGTATATTCAAATACTAAAGGGGATTTTAATCTGGATGGGGTGTTC AATGTGATATCTTATGATGTTGTTCCCAAGATAAAGGACATGCTTCTGGACTTGGATTTT AAGATTGTTATAGCTGATGAATCACACTTTCTGAAGAATGCCCAAGCAAAGAGAACAATG CATTCACTTCCTGTTCTGCAGAAAGCTAAATATGTGGTTTTGCTAAGTGGCACCCCTGCG TTATCTCGCCCTATCGAGCTGTTTACTCAGCTCCAGGCATTGTATCCAACTGTATACAAG AATGTTAATGAGTATGGTAATAGATATTGCAAAGGTGGCTTTTTTGGGCTTTATCAAGGT GCTAGCAATCATGAGGAGCTTCATAATTTGATGAAAGCAACTGTCATGATCCGCAGGTTG AAGAAAGATGTCCTTTCACAGTTGCCTGTTAAACGCAGACAACAGGCCTTTCTGGATTTA AGTGAGAAAGAGATGAGACATATTCGTGCTCTATTTCATGAGTTGGAGACTGTGAAGATC AAAATCCAGTCCTGTGACTCCCAGGAGACGATGGACTCTCTCAAATTTGCTCAAAAGAAT CTTATTAACAAGATCTACAATGATTCAGCTGAAGCCAAAATTCCAGCAGTGCTAGATTAC CTGGGTACTATAATTGAGGCCGAGTGCAAATTTTTAATATTTGCACATCATCAATCCATG CTTGAAGCTATTCACCAACATCTCTTGAAAAAGAAAGTTAAGTGCATAAGAATTGATGGT CAAACACCTGTACCTGTAAGACAGACTCTAGTCACAGATTTCCAGAATAAGGATGACATC AAGGCAGCAGTGTTATCCATAAAAGCTGGAGGTGTTGGGTTAACTTTGACAGCAGCAAGT ACAGTAATCTTTGCTGAGTTATCATGGACTCCAGGTGACCTTATTCAAGCCGAAGACCGT GCCCATCGTATTGGTCAGGTTTCTTCGGTGAACATATATTACCTTCTTGCAAATGACACT GTGGATGACATTATATGGGACGTTGTTCAAGGCAAACTTGAGAATTTGGGACAGATGCTG GATGGGCAGGAGAAAACGCTGGATGTGTCCCAGAGCGACACTAGGCCCAGCCCTTCCAAG CAGAAGACGCTCGACGCCTACCTCAAGCGATGCAGCAATTCCACAGAAGCTGATCAGCCC AAGCTCAAGAACCCTAGGTTCTGA

Peptide Sequence

PEP ID	Os07t0636200-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:26416970:26429287:1 gene:Os07g0636200 transcript:Os07t0636200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD-like helicase, N-terminal domain containing protein. (Os07t0636200-01);Similar to chromatin remodeling complex subunit. (Os07t0636200-02);Similar to chromatin remodeling complex subunit. (Os07t0636200-03)
Sequence	MIRWVQGRRGYYSPSSENPQIPSPARARALNFLGEEKISPWREPRPRMAGLGGGWGGGYD DDDDWGLSAEQLDQLERDAYRKLAERKASSSAASTATSPLPSAAYSPVKNSHHHPASRVS QESCFGKVESLSPSRLSQPNASGNAVNNSQGNMSKVSVHLFLHSTGVIAAKFQYHQKLVD AVHKIPKASWNGKERVWMFPHSSLSVAEEVLSTVPGIAVEVQKLDPLVKRALTASLYAGD LRDLYGKIPTDVESKLMPFQREGVRFALQHGARTLIADEMGLGKTLQAIAVASCLHDAWP VLVISPSSLRLHWASMIQHWLNIPTEDILVVLPQTGGSNKAGYRLVYSNTKGDFNLDGVF NVISYDVVPKIKDMLLDLDFKIVIADESHFLKNAQAKRTMHSLPVLQKAKYVVLLSGTPA LSRPIELFTQLQALYPTVYKNVNEYGNRYCKGGFFGLYQGASNHEELHNLMKATVMIRRL KKDVLSQLPVKRRQQAFLDLSEKEMRHIRALFHELETVKIKIQSCDSQETMDSLKFAQKN LINKIYNDSAEAKIPAVLDYLGTIIEAECKFLIFAHHQSMLEAIHQHLLKKKVKCIRIDG QTPVPVRQTLVTDFQNKDDIKAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDR AHRIGQVSSVNIYYLLANDTVDDIIWDVVQGKLENLGQMLDGQEKTLDVSQSDTRPSPSK QKTLDAYLKRCSNSTEADQPKLKNPRF

Transcript Sequence

Transcript ID	Os07t0636200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:26416970:26429287:1 gene:Os07g0636200 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD-like helicase, N-terminal domain containing protein. (Os07t0636200-01);Similar to chromatin remodeling complex subunit. (Os07t0636200-02);Similar to chromatin remodeling complex subunit. (Os07t0636200-03)
Sequence	GAATCCCATGATCCGTTGGGTACAAGGAAGAAGAGGATACTACTCTCCAAGTAGCGAAAA TCCACAAATTCCCTCTCCGGCTCGCGCGCGCGCTCTCAATTTTTTGGGGGAAGAGAAGAT CTCCCCTTGGAGGGAACCCCGCCCAAGAATGGCGGGTCTCGGCGGCGGATGGGGCGGCGG GTACGACGACGACGACGACTGGGGGCTGAGCGCGGAGCAGCTCGACCAGCTCGAGCGGGA CGCCTACCGCAAGCTCGCCGAGCGCAAGGCCTCCTCCTCCGCCGCCTCCACCGCCACCTC GCCGCTCCCCTCCGCGGCCTACTCGCCGGTCAAGAACAGCCACCACCACCCGGCATCCAG GGTTTCCCAGGAGTCTTGCTTCGGCAAGGTAGAATCACTTTCTCCTTCTCGGCTTAGTCA ACCAAATGCATCGGGAAATGCAGTTAATAATAGTCAGGGCAATATGTCTAAGGTATCAGT ACATCTTTTCCTTCATTCTACTGGTGTGATCGCAGCGAAGTTCCAGTACCACCAGAAACT TGTGGATGCAGTTCACAAGATCCCCAAAGCCAGCTGGAACGGGAAGGAGAGGGTATGGAT GTTCCCACACTCATCATTATCAGTAGCAGAGGAAGTTCTTAGTACAGTACCTGGAATAGC TGTTGAGGTCCAAAAACTGGATCCGCTGGTTAAGCGCGCACTAACTGCTTCTTTATATGC CGGAGATCTTCGAGATTTGTATGGCAAGATTCCAACTGATGTTGAGTCAAAGCTTATGCC GTTTCAGCGTGAAGGTGTCAGGTTTGCTTTACAGCATGGTGCCAGGACCCTGATAGCAGA TGAAATGGGTCTTGGCAAGACATTACAGGCAATTGCTGTTGCTTCTTGCCTTCATGATGC CTGGCCAGTTCTTGTAATCTCTCCATCATCCTTGCGATTACATTGGGCTTCTATGATTCA GCATTGGCTTAACATCCCCACGGAAGATATCTTGGTGGTGCTACCACAAACTGGAGGATC AAATAAAGCAGGATACAGATTGGTATATTCAAATACTAAAGGGGATTTTAATCTGGATGG GGTGTTCAATGTGATATCTTATGATGTTGTTCCCAAGATAAAGGACATGCTTCTGGACTT GGATTTTAAGATTGTTATAGCTGATGAATCACACTTTCTGAAGAATGCCCAAGCAAAGAG AACAATGCATTCACTTCCTGTTCTGCAGAAAGCTAAATATGTGGTTTTGCTAAGTGGCAC CCCTGCGTTATCTCGCCCTATCGAGCTGTTTACTCAGCTCCAGGCATTGTATCCAACTGT ATACAAGAATGTTAATGAGTATGGTAATAGATATTGCAAAGGTGGCTTTTTTGGGCTTTA TCAAGGTGCTAGCAATCATGAGGAGCTTCATAATTTGATGAAAGCAACTGTCATGATCCG CAGGTTGAAGAAAGATGTCCTTTCACAGTTGCCTGTTAAACGCAGACAACAGGCCTTTCT GGATTTAAGTGAGAAAGAGATGAGACATATTCGTGCTCTATTTCATGAGTTGGAGACTGT GAAGATCAAAATCCAGTCCTGTGACTCCCAGGAGACGATGGACTCTCTCAAATTTGCTCA AAAGAATCTTATTAACAAGATCTACAATGATTCAGCTGAAGCCAAAATTCCAGCAGTGCT AGATTACCTGGGTACTATAATTGAGGCCGAGTGCAAATTTTTAATATTTGCACATCATCA ATCCATGCTTGAAGCTATTCACCAACATCTCTTGAAAAAGAAAGTTAAGTGCATAAGAAT TGATGGTCAAACACCTGTACCTGTAAGACAGACTCTAGTCACAGATTTCCAGAATAAGGA TGACATCAAGGCAGCAGTGTTATCCATAAAAGCTGGAGGTGTTGGGTTAACTTTGACAGC AGCAAGTACAGTAATCTTTGCTGAGTTATCATGGACTCCAGGTGACCTTATTCAAGCCGA AGACCGTGCCCATCGTATTGGTCAGGTTTCTTCGGTGAACATATATTACCTTCTTGCAAA TGACACTGTGGATGACATTATATGGGACGTTGTTCAAGGCAAACTTGAGAATTTGGGACA GATGCTGGATGGGCAGGAGAAAACGCTGGATGTGTCCCAGAGCGACACTAGGCCCAGCCC TTCCAAGCAGAAGACGCTCGACGCCTACCTCAAGCGATGCAGCAATTCCACAGAAGCTGA TCAGCCCAAGCTCAAGAACCCTAGGTTCTGACATTTCTCAGGGTTTTTAGCTCTACTATG TTTTTGTTTGGCAATTGGCATGACCCTCTTGCCTTAAACGAAGGAATGCTGCAGTGTCAG GTAGCTGTGTGTTGGTGTTATGATCACAGCCATGCTGTATTTTGTATTACCCAGCTAAAT GCCCGTGCGTTGCAATGAAAATTAAGAATAACTTTGATC