Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0636000-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:26406702:26408800:-1 gene:Os07g0636000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (Nucleolar protein NAP57 homolog) (Nopp-140 associated protein of 57 kDa homolog) (AtNAP57). (Os07t0636000-01)
Sequence	ATGTCCTCCCCGCCGCCGGCCGCCGCCGCCTCCCCCTCCTCCGAGCTAACCAAGTCCAAG AAGAAGAAGATCAAGTCCAAGGACGCCGCCACCGCCGCCGCCGTCGACCCGCCGTCCCTC GCCGAGGCGGAGGCGAAGACCGACGGCTACCTCATCAAGCCGCAGTCGCTGGTCCCCTCC CTCGACACCTCGACATGGCCGCTCCTCCTCAAGAACTACGACCGCCTCAACGTCCGCACC GGCCACTACACCCCGCTCCCCTCCGGCCACTCGCCGCTCAAGCGCCCCATCGCCGAGTAC CTCCGCTACGGCGTCATCAACCTCGACAAGCCCTCCAACCCCTCCTCGCACGAGGTCGTC GCCTGGATCAAGCGCCTCCTCCGCGTCGACAAGACCGGCCACAGCGGCACGCTCGACCCC AAGGTCACCGGCAACCTCATCGTCTGCGTCGACCGCGCCACCCGCCTCGTCAAGTCGCAG CAGGGCGCCGGCAAGGAGTACGTCTGCGTCGCGCGCTTCCACGCCGCAGTCCCCGACACC GCCCGCGTCGCCCGCGCGCTCGAGGCTCTCACCGGCGCCGTGTTCCAGCGGCCCCCGCTC ATCTCCGCCGTCAAGCGCCAGCTCAGGGTGAGGACCATCTACGAGAGCAAGCTGCTCGAG CACGACGCCGACCGGCACCTCGCCGTGTTCTGGATCTCCTGCGAGGCCGGGACCTATGTC AGGACGCTCTGCGTCCACCTTGGCCTGCTGCTCGGCGTCGGCGCGCATATGCAGGAGCTG CGCCGCGTGCGATCGGGGATCCTCGGGGAGCAGGATAACATGGTCACGATGCACGATGTC ATGGACGCGAGGTGGGCGATGGACAACTACAACGATGAGACTTACTTGCGGCGCATCGTG ATGCCTCTCGAGGTATTGCTTACTAGCTACAAGAGGCTTGTTGTTAAGGACTCTGCTGTC AATGCTATATGCTATGGTGCTAAGCTTATGATACCCGGGTTGCTCCGGTTTGAAAATGAT ATCGATGTCGGGGAGGAGGTGGTTCTCATGACCACTAAAGGAGAGGCCATTGCTATTGGT ATTGCCGAGATGACCACCGCTGTTATGGCGACTTGTGACCATGGTGCAGTCGCAAAGATT AAGAGGGTGGTGATGGATAGAGACACGTATCCGAGGAAGTGGGGGCTTGGTCCGGTTGCG CTCAAGAAGAAAAAGATGGTCGCAGAGGGTTTACTGGATAAGCATGGGAAGCCAAATGAG AAGACCCCAGCTGAGTGGATCCGGAATGTGGCACTTCCTACTGGTGGTGATGCGATGATC GCTAGCATTGCAGCTGCTCCTGAAGAGGCCAAGGTGAAGGCGGAACAGGATGTGGTTGCG ACTGAAGAGGTCAAGGAGAAGAAAAAGAAGAAGAAGCACAAGGATGAGGAGGATGCTGCC GACGAAGGCCGCAAGAGGAAGATTGAGGATGATGACGCGTCTGCTTCTGTGCCTGTAAAG AAGATCAAGGTTGAAGAGAGTGCTGAGGAGGTAGAAGGGGAGAAGAGTGAGAAGAAGAAG AAGAAGAAGAAAGACAAGGGTGAACAAGGATCAGGTGATGCAGAGGTGAAGGAAGAGAAG GCTGATATATCTGATGGGGAGAAGGTTGGCAGTGAGAAGAAAAAGAAAAAGAAGAAGAGC AAGGAAGGAGGTGATGTTGTGGATCCAGAGAGCGCAGCCAATGGAGATGGCGTGGAAGCT GAGAAAAGCGAAAAGAAAAAGGAGAAGAAAAAGAAGAAGAGTCGAGATACAGAGGAGGCA TAA

Peptide Sequence

PEP ID	Os07t0636000-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:26406702:26408800:-1 gene:Os07g0636000 transcript:Os07t0636000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (Nucleolar protein NAP57 homolog) (Nopp-140 associated protein of 57 kDa homolog) (AtNAP57). (Os07t0636000-01)
Sequence	MSSPPPAAAASPSSELTKSKKKKIKSKDAATAAAVDPPSLAEAEAKTDGYLIKPQSLVPS LDTSTWPLLLKNYDRLNVRTGHYTPLPSGHSPLKRPIAEYLRYGVINLDKPSNPSSHEVV AWIKRLLRVDKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEYVCVARFHAAVPDT ARVARALEALTGAVFQRPPLISAVKRQLRVRTIYESKLLEHDADRHLAVFWISCEAGTYV RTLCVHLGLLLGVGAHMQELRRVRSGILGEQDNMVTMHDVMDARWAMDNYNDETYLRRIV MPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIDVGEEVVLMTTKGEAIAIG IAEMTTAVMATCDHGAVAKIKRVVMDRDTYPRKWGLGPVALKKKKMVAEGLLDKHGKPNE KTPAEWIRNVALPTGGDAMIASIAAAPEEAKVKAEQDVVATEEVKEKKKKKKHKDEEDAA DEGRKRKIEDDDASASVPVKKIKVEESAEEVEGEKSEKKKKKKKDKGEQGSGDAEVKEEK ADISDGEKVGSEKKKKKKKSKEGGDVVDPESAANGDGVEAEKSEKKKEKKKKKSRDTEEA

Transcript Sequence

Transcript ID	Os07t0636000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:26406702:26408800:-1 gene:Os07g0636000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (Nucleolar protein NAP57 homolog) (Nopp-140 associated protein of 57 kDa homolog) (AtNAP57). (Os07t0636000-01)
Sequence	CTAAAATCCCCTCCCCCCAACCCGCCGCCATGTCCTCCCCGCCGCCGGCCGCCGCCGCCT CCCCCTCCTCCGAGCTAACCAAGTCCAAGAAGAAGAAGATCAAGTCCAAGGACGCCGCCA CCGCCGCCGCCGTCGACCCGCCGTCCCTCGCCGAGGCGGAGGCGAAGACCGACGGCTACC TCATCAAGCCGCAGTCGCTGGTCCCCTCCCTCGACACCTCGACATGGCCGCTCCTCCTCA AGAACTACGACCGCCTCAACGTCCGCACCGGCCACTACACCCCGCTCCCCTCCGGCCACT CGCCGCTCAAGCGCCCCATCGCCGAGTACCTCCGCTACGGCGTCATCAACCTCGACAAGC CCTCCAACCCCTCCTCGCACGAGGTCGTCGCCTGGATCAAGCGCCTCCTCCGCGTCGACA AGACCGGCCACAGCGGCACGCTCGACCCCAAGGTCACCGGCAACCTCATCGTCTGCGTCG ACCGCGCCACCCGCCTCGTCAAGTCGCAGCAGGGCGCCGGCAAGGAGTACGTCTGCGTCG CGCGCTTCCACGCCGCAGTCCCCGACACCGCCCGCGTCGCCCGCGCGCTCGAGGCTCTCA CCGGCGCCGTGTTCCAGCGGCCCCCGCTCATCTCCGCCGTCAAGCGCCAGCTCAGGGTGA GGACCATCTACGAGAGCAAGCTGCTCGAGCACGACGCCGACCGGCACCTCGCCGTGTTCT GGATCTCCTGCGAGGCCGGGACCTATGTCAGGACGCTCTGCGTCCACCTTGGCCTGCTGC TCGGCGTCGGCGCGCATATGCAGGAGCTGCGCCGCGTGCGATCGGGGATCCTCGGGGAGC AGGATAACATGGTCACGATGCACGATGTCATGGACGCGAGGTGGGCGATGGACAACTACA ACGATGAGACTTACTTGCGGCGCATCGTGATGCCTCTCGAGGTATTGCTTACTAGCTACA AGAGGCTTGTTGTTAAGGACTCTGCTGTCAATGCTATATGCTATGGTGCTAAGCTTATGA TACCCGGGTTGCTCCGGTTTGAAAATGATATCGATGTCGGGGAGGAGGTGGTTCTCATGA CCACTAAAGGAGAGGCCATTGCTATTGGTATTGCCGAGATGACCACCGCTGTTATGGCGA CTTGTGACCATGGTGCAGTCGCAAAGATTAAGAGGGTGGTGATGGATAGAGACACGTATC CGAGGAAGTGGGGGCTTGGTCCGGTTGCGCTCAAGAAGAAAAAGATGGTCGCAGAGGGTT TACTGGATAAGCATGGGAAGCCAAATGAGAAGACCCCAGCTGAGTGGATCCGGAATGTGG CACTTCCTACTGGTGGTGATGCGATGATCGCTAGCATTGCAGCTGCTCCTGAAGAGGCCA AGGTGAAGGCGGAACAGGATGTGGTTGCGACTGAAGAGGTCAAGGAGAAGAAAAAGAAGA AGAAGCACAAGGATGAGGAGGATGCTGCCGACGAAGGCCGCAAGAGGAAGATTGAGGATG ATGACGCGTCTGCTTCTGTGCCTGTAAAGAAGATCAAGGTTGAAGAGAGTGCTGAGGAGG TAGAAGGGGAGAAGAGTGAGAAGAAGAAGAAGAAGAAGAAAGACAAGGGTGAACAAGGAT CAGGTGATGCAGAGGTGAAGGAAGAGAAGGCTGATATATCTGATGGGGAGAAGGTTGGCA GTGAGAAGAAAAAGAAAAAGAAGAAGAGCAAGGAAGGAGGTGATGTTGTGGATCCAGAGA GCGCAGCCAATGGAGATGGCGTGGAAGCTGAGAAAAGCGAAAAGAAAAAGGAGAAGAAAA AGAAGAAGAGTCGAGATACAGAGGAGGCATAATAGGTAGAATTATAGTACGCATTGGCTG AATGTATCCTTTTGCTGCGGTTGTAGGGAGTTTGAGATGCCTATCTTTCCTTGCTGTGAT CCCTTTTCAACCATTAATGGTTTCAAAGGCCTAATGCCCATCCTTGAATTACTACCATTT TACTGCTGTGAAGTACTGTGGTAAGTAGCGATATTTCCATTGAACTTGTTGAACAATGAG CCATGTATTGCTGTTCCTGTTTTCAGTTAATGCAATGAGTTTTGCTTACACCTCACAGT