Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0635800-00
CDS Infomation	cds chromosome:IRGSP-1.0:7:26397495:26399612:1 gene:Os07g0635800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0635800-00)
Sequence	ATGCTCGCCGCCGCCGCCGCCGCCGCCGCCGCCGTCAAGGGGAGGATCAAATCGCGGCCA CGGCTACCTCCTCTCGCCTCGCCGGCGACGACTTCCACATGCGCTCCCGCTCCCGCCGCC ACCGCTCGCCGCGGCTCTCATGCGGCCGCGTCTCAAGTCGTCTCCCACGCGTCGCTCCTC CTCCGGCTGCAGTCGTGCCCGGATTTCCAGGAGGCACGGAGGCTTCACGCGGCGGTCCTC GTCGGCGGCCACGGCCACGGCACCGTCCTCGTCGCACAGTTGGTGCGCGCGTACGCGAAG CTCGGGGATGTCGCGCACGCGCTGCGGGTGTTCGACGGAATGCCGAGGAGGAACTCCTTC GCGTGGAACGCCGTGATCAAGGGCCTTGTCGACGCTGGTAGATTCTCGGAGGCGCTGGAG ATGTTTTGGGGGATGGTGAACGATGGCTCGGTAGCGGTGGATGGTTTCACGTATCCGCCT GTCATCAAGGCGTGTGCTGCGCTTGGAGCTGTTGCGCAGGGGAGGAAGGTATGGGAGATG GTGGAGACTGACATTGCCAGCGGTAATGCGAGGCCCAACGTGTTTGTGCAGTGCGCGCTT GTGGATATGTTTGCAAAGTGTGGGTGCTTGGATGAAGCAAGGAATGTTTTTGAGAGCATG CAAGTGAGGGATTTGGCTGCGTGGACTGCGATGATTGGAGGAACTGTGCATTCAGGGAAC TGGCTTGAGGTGGTGGATTTGTTCAATCACATGAGATCAGAAGGGTTTGGGGTTGACTCT CTAATTGCTGCAACTGTCATTTCAGCGTGTGGGAGAGCAGGTGAATTGCAGGTTGGAACT GCATTGCATGGATGTGCTGTGAAAAGTGGAGCAAGTGGTGATATATATGTTTCCAACGCC TTGGTAGATATGTACTGCAAATGCGGTTGCGTAGAGATGGCTGATTGTCTTTTCTGGTCT ACAAATTCCAAAGATGTTGTCTCCTGGAGTAGCTTGATTGTGGGGTATTCACAAAATGGA ATGCATAATGTGAGTGTCAGTTTGTTCTGTGAAATGATCTCTTTGGGGATAAACCCCAAC TCTAGTACTCTGGCAAGCATACTTCCTTGTCTTTCTGTGCTGAAGTTAATCAGGAGTGGA AAAGAAATTCATTGCTTCTCTATAAGACATGGACTTGAGAGAAGTGAGTTTGTAGTGAGC GCACTTATAGACTTGTACAGCAAACAGGGGTTGATAAGGGTGGCAGAAACTATATTTTGG CTTACGCTGGACAAAGATCTAGCCATTTGGAACTCAATGGTTGCAGGATATGCTGTGAAT GGATATTCAGACTCTGCATTCTGCGCATTGAGGTTATTACAGAAAGTGGGTTTAAAACCT GATCATGTGACTGTTGTTTCAGTTCTTCCTTTATGCAATCAACACCATATGCTCATCCAG GGTAAGGAACTACATGCATATGTGATCAAGTATTGTATTAACTCAGTCTGCTCAGTCAAT AATGCACTTCTAGATATGTATTGCAAGTGTGGTTTCCTAGAAGTAGCTAAAGAGGTTTTT CAACTGATGACAGAACGCAATACAGTTACATATAACATACTGATTTCTTCTTTTGGAAAG CATAACCATGAAGATCAAGCCCTATCATTTTTCGATCTAATGAAGAGAGATGGAATTGCT CCAGATAAAGTGACTTTTGTGGCACTACTATCTTGTTGTAGCCATGCTGGTCTCATTGAC AAGGGTTTGCACTTATATCATTCCATGTTACATGACTACAATATTTCTCCAGAGAAGGAA CACTACTCATGCATTGTTGATCTCTACAGCAGATGTGGGAAGCTTGATGAGGCTTGGTGT TTCATGTCAAATATGGCAGAAGAGCCAGAAATCGATGTCCTTGGAGGGCTCTTGGCAGCA TGTAGAGTGCATAATAGAATGGACATTGCTGAGCTGGTTGGGAAAAGAATATTTGAGCAA AATCCCAATGATCCTGGCTATCATATTCTGCTTTCTAATATCTACGCCGATGCTGGAATG TGGTCTGATGTGACAAGGATAAGAACTATGATACAAGAGAGAAATTTGAAGAAGGAAACA GGAAATAGCTTGACCTAA

Peptide Sequence

PEP ID	Os07t0635800-00
PEP Infomation	pep chromosome:IRGSP-1.0:7:26397495:26399612:1 gene:Os07g0635800 transcript:Os07t0635800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0635800-00)
Sequence	MLAAAAAAAAAVKGRIKSRPRLPPLASPATTSTCAPAPAATARRGSHAAASQVVSHASLL LRLQSCPDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSF AWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEM VETDIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGN WLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNA LVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPN SSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFW LTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQ GKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGK HNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKE HYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQ NPNDPGYHILLSNIYADAGMWSDVTRIRTMIQERNLKKETGNSLT

Transcript Sequence

Transcript ID	Os07t0635800-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:26397495:26399612:1 gene:Os07g0635800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0635800-00)
Sequence	ATGCTCGCCGCCGCCGCCGCCGCCGCCGCCGCCGTCAAGGGGAGGATCAAATCGCGGCCA CGGCTACCTCCTCTCGCCTCGCCGGCGACGACTTCCACATGCGCTCCCGCTCCCGCCGCC ACCGCTCGCCGCGGCTCTCATGCGGCCGCGTCTCAAGTCGTCTCCCACGCGTCGCTCCTC CTCCGGCTGCAGTCGTGCCCGGATTTCCAGGAGGCACGGAGGCTTCACGCGGCGGTCCTC GTCGGCGGCCACGGCCACGGCACCGTCCTCGTCGCACAGTTGGTGCGCGCGTACGCGAAG CTCGGGGATGTCGCGCACGCGCTGCGGGTGTTCGACGGAATGCCGAGGAGGAACTCCTTC GCGTGGAACGCCGTGATCAAGGGCCTTGTCGACGCTGGTAGATTCTCGGAGGCGCTGGAG ATGTTTTGGGGGATGGTGAACGATGGCTCGGTAGCGGTGGATGGTTTCACGTATCCGCCT GTCATCAAGGCGTGTGCTGCGCTTGGAGCTGTTGCGCAGGGGAGGAAGGTATGGGAGATG GTGGAGACTGACATTGCCAGCGGTAATGCGAGGCCCAACGTGTTTGTGCAGTGCGCGCTT GTGGATATGTTTGCAAAGTGTGGGTGCTTGGATGAAGCAAGGAATGTTTTTGAGAGCATG CAAGTGAGGGATTTGGCTGCGTGGACTGCGATGATTGGAGGAACTGTGCATTCAGGGAAC TGGCTTGAGGTGGTGGATTTGTTCAATCACATGAGATCAGAAGGGTTTGGGGTTGACTCT CTAATTGCTGCAACTGTCATTTCAGCGTGTGGGAGAGCAGGTGAATTGCAGGTTGGAACT GCATTGCATGGATGTGCTGTGAAAAGTGGAGCAAGTGGTGATATATATGTTTCCAACGCC TTGGTAGATATGTACTGCAAATGCGGTTGCGTAGAGATGGCTGATTGTCTTTTCTGGTCT ACAAATTCCAAAGATGTTGTCTCCTGGAGTAGCTTGATTGTGGGGTATTCACAAAATGGA ATGCATAATGTGAGTGTCAGTTTGTTCTGTGAAATGATCTCTTTGGGGATAAACCCCAAC TCTAGTACTCTGGCAAGCATACTTCCTTGTCTTTCTGTGCTGAAGTTAATCAGGAGTGGA AAAGAAATTCATTGCTTCTCTATAAGACATGGACTTGAGAGAAGTGAGTTTGTAGTGAGC GCACTTATAGACTTGTACAGCAAACAGGGGTTGATAAGGGTGGCAGAAACTATATTTTGG CTTACGCTGGACAAAGATCTAGCCATTTGGAACTCAATGGTTGCAGGATATGCTGTGAAT GGATATTCAGACTCTGCATTCTGCGCATTGAGGTTATTACAGAAAGTGGGTTTAAAACCT GATCATGTGACTGTTGTTTCAGTTCTTCCTTTATGCAATCAACACCATATGCTCATCCAG GGTAAGGAACTACATGCATATGTGATCAAGTATTGTATTAACTCAGTCTGCTCAGTCAAT AATGCACTTCTAGATATGTATTGCAAGTGTGGTTTCCTAGAAGTAGCTAAAGAGGTTTTT CAACTGATGACAGAACGCAATACAGTTACATATAACATACTGATTTCTTCTTTTGGAAAG CATAACCATGAAGATCAAGCCCTATCATTTTTCGATCTAATGAAGAGAGATGGAATTGCT CCAGATAAAGTGACTTTTGTGGCACTACTATCTTGTTGTAGCCATGCTGGTCTCATTGAC AAGGGTTTGCACTTATATCATTCCATGTTACATGACTACAATATTTCTCCAGAGAAGGAA CACTACTCATGCATTGTTGATCTCTACAGCAGATGTGGGAAGCTTGATGAGGCTTGGTGT TTCATGTCAAATATGGCAGAAGAGCCAGAAATCGATGTCCTTGGAGGGCTCTTGGCAGCA TGTAGAGTGCATAATAGAATGGACATTGCTGAGCTGGTTGGGAAAAGAATATTTGAGCAA AATCCCAATGATCCTGGCTATCATATTCTGCTTTCTAATATCTACGCCGATGCTGGAATG TGGTCTGATGTGACAAGGATAAGAACTATGATACAAGAGAGAAATTTGAAGAAGGAAACA GGAAATAGCTTGACCTAA