Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0634400-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:26327405:26329772:-1 gene:Os07g0634400 gene_biotype:protein_coding transcript_biotype:protein_coding description:HAD-superfamily hydrolase, subfamily IA, variant 3 domain containing protein. (Os07t0634400-01)
Sequence

ATGGAATCCTACACAGCTGGAGCCAAGTTTGATTGTTTGCTGTTTGACATGGATGATACT
CTGTACCCACTGAGCTTAGGAATCAACTTAGCTTGCCGCAAGAACATACAAGACTATATG
CTGAACAAGCTTCAGATTGAAGAGAGCCTTGTTCCCAAGATGTGTCTTGATCTGTACAGG
GAATTTGGAACTACAATGGCTGGACTGAAGGTCTTGGGTTATGATTTCGACTATGACGAT
TTCCACGCTTGTGTTCATGGCACATTGCCATACGAGAAGCTGAAGCCTGACCCTGTCTTG
AGGCACCTACTGCTTTCACTGCCACAAAGGAAGATTATATTCACAAACTCTGACAAGGCG
CACGCCGCGACGGTTCTGAAGAAGCTCGGGCTGGAGGATTGCTTCGAAGGGATCATCTGC
TTCGAGACTCTGAACCCATCGACTGAACCTGAAGAAGACGACTCTGACAGTACCGATGGA
GGCAGCAGTTCTGACAGCTCAGCTTCTCATCGCAAGAGGAAGATCCTGTGCAAGCCGTCC
CTGGAATCCATGGAAGCCGTCATCGAGATCGCCAAGCTCGACGCCATGAAGACGGTGTTC
TTCGACGACAGCCCACGCAACATCGCCGCCGGGAAGGCCGCCGGATTCCACACGGTGATC
GTGGGGAGCTCGGCGGCGGTGGCCGGGGCGGACGTGGCGCTGGAGAGCATCCACAACATC
AAGGAGGCGGTGCCGGAGCTGTGGGAGGCCGCCGGCGAGCACGTCCAGGCCCAGCTGGCC
CAGGCCGCCGTCGACCTCCGCTCCGCCGCCGTCGAGACCACCGTGCTCGCCTGA

Peptide Sequence

PEP ID

Os07t0634400-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:26327405:26329772:-1 gene:Os07g0634400 transcript:Os07t0634400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:HAD-superfamily hydrolase, subfamily IA, variant 3 domain containing protein. (Os07t0634400-01)
Sequence

MESYTAGAKFDCLLFDMDDTLYPLSLGINLACRKNIQDYMLNKLQIEESLVPKMCLDLYR
EFGTTMAGLKVLGYDFDYDDFHACVHGTLPYEKLKPDPVLRHLLLSLPQRKIIFTNSDKA
HAATVLKKLGLEDCFEGIICFETLNPSTEPEEDDSDSTDGGSSSDSSASHRKRKILCKPS
LESMEAVIEIAKLDAMKTVFFDDSPRNIAAGKAAGFHTVIVGSSAAVAGADVALESIHNI
KEAVPELWEAAGEHVQAQLAQAAVDLRSAAVETTVLA

Transcript Sequence

Transcript ID

Os07t0634400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:26327405:26329772:-1 gene:Os07g0634400 gene_biotype:protein_coding transcript_biotype:protein_coding description:HAD-superfamily hydrolase, subfamily IA, variant 3 domain containing protein. (Os07t0634400-01)
Sequence

CAACCAGGGCATTGTGTTGTGCTTCCGTTTAGCATCTAGGCTCTAGCAAACCTGTAAAGA
TGGAATCCTACACAGCTGGAGCCAAGTTTGATTGTTTGCTGTTTGACATGGATGATACTC
TGTACCCACTGAGCTTAGGAATCAACTTAGCTTGCCGCAAGAACATACAAGACTATATGC
TGAACAAGCTTCAGATTGAAGAGAGCCTTGTTCCCAAGATGTGTCTTGATCTGTACAGGG
AATTTGGAACTACAATGGCTGGACTGAAGGTCTTGGGTTATGATTTCGACTATGACGATT
TCCACGCTTGTGTTCATGGCACATTGCCATACGAGAAGCTGAAGCCTGACCCTGTCTTGA
GGCACCTACTGCTTTCACTGCCACAAAGGAAGATTATATTCACAAACTCTGACAAGGCGC
ACGCCGCGACGGTTCTGAAGAAGCTCGGGCTGGAGGATTGCTTCGAAGGGATCATCTGCT
TCGAGACTCTGAACCCATCGACTGAACCTGAAGAAGACGACTCTGACAGTACCGATGGAG
GCAGCAGTTCTGACAGCTCAGCTTCTCATCGCAAGAGGAAGATCCTGTGCAAGCCGTCCC
TGGAATCCATGGAAGCCGTCATCGAGATCGCCAAGCTCGACGCCATGAAGACGGTGTTCT
TCGACGACAGCCCACGCAACATCGCCGCCGGGAAGGCCGCCGGATTCCACACGGTGATCG
TGGGGAGCTCGGCGGCGGTGGCCGGGGCGGACGTGGCGCTGGAGAGCATCCACAACATCA
AGGAGGCGGTGCCGGAGCTGTGGGAGGCCGCCGGCGAGCACGTCCAGGCCCAGCTGGCCC
AGGCCGCCGTCGACCTCCGCTCCGCCGCCGTCGAGACCACCGTGCTCGCCTGAGCTGCTC
AGACGCCGTCCTCCATGTCGCCGTGCATGCTCCCTTTCCCATGGTATTAATTAATTAGTG
GATGATTTTTTTTTCCTCAATGACACTAGCTTACTGCAAAAATCAAGAGAGGGAGGAAGA
CGGTGAAAAATGGCGTGAGGTGTACTCGGTGATTTGTGTGATGAATGAACCTGTCATGTA
ATGAACTACTGATGTGAATGAATGAATGGATCAATAAGAATTGCCTCATTTG