Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0633600-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:26298359:26300541:-1 gene:Os07g0633600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SUB1; calcium ion binding. (Os07t0633600-01);Similar to SUB1 (short under blue light 1). (Os07t0633600-02)
Sequence	ATGTCATCCTCCGACCAGGACGACCACGACGAGGACGCCCCGCTCTTCCGCGCCAGCTCC GGCGACGACGACGACCACCCGCACCCGCGCCGCCGCTCCTCCCCGGTCGGCGAGGTCCCC GTCGCGCAGTCGATCATCAAGGCGGCGAGCAACGTCTGCTTCTCGCTCTTCGTCCTCGCC GTCCTCGTCGTCACCGTCGTCGCCGTCACCTACCAGCCGCCCGACCCCTGGCTCCAGTCC TCCGCCGCCATCACCACCTCCCTCTCCCGCGTCCTCCCCAACTCCACCTTCCTCCTCCCC GACGACTCCCTCCTCCCCACCGGCGAGGACTTCAACTCCTCCTCCTCGACCCCCTCCGCC CCGCGCCGCGACGACCCAGACCAGGCCACCGCCACCGCCACCGCCGCCGCGGTTAACGGC ACCTGCGACCCGGACGCGCCGCTCAACTGCTCCGACCCACGCGTCCTCGCCGCCGTCAAG GCGTTCAATGCCAAGGCCTTCTTCCGCAAGTCCATCGTCTTCCTCAGCTACGAGGCGCCG GTGCCGGGACCCAAGCCCGGGGAGTGCGACGTCGCCTGGCGGTTCAGGAACCGGAGGGAG AAATCTTGGCGCAGGTACAGGGACTACCGCCGCTTCGTCCTTGTCCCCGGCGATGGATGC GCTCTCGACATTAACCGCGTCGGCAAGTTCCGATCCGGGACCAATGCGGCTCGCCCGCCT CGTCAGAAGGGTTCCAAGAACCGGAACCCGCGCGTCGCGCCGCCGCCAGTGGACGCTGAG ATCAACGACACCATCCCAATTGTTGGTTCAGAGGCAGAGTTCAGGAGAGGCAAGTACTTG TACTACATGAGAGGTGGTGACCATTGCAAGAGCATGAACCAGTTCATATGGAGCTTCTTG TGTGGCCTTGGTGAGGCCAAGTTCTTGAACCGGACTTTCGTGATGGATTTGAACATGTGT CTGTCCGGGGCGCACACGAACAATGGGAAGGATGAGGATGGGAAGGATTTTAGGTACTAT TTTGATTTCGAGCACTTGAAGGAGTCGGTGTCTGTGGTGGAGGAAGGGGACTTCTTGAAA GATTGGAAGCGCTGGGACAAGAAGAAGGGTCCTGGCCGGATCTCGGTGCGGAAGGTACCG TCGTACAAGGTGACTCCAATGCAGCTTAAGAGGGACAAGAGCAACATCATTTGGAGGCTG TTTGATGGGCAGGAGCCTGAGAATTACTGGTACAGGGTGTGTGAGGGGCGAGCCGCTAAG GTCATCCAGCGGCCTTGGTATGCTATTTGGAAGTCGAAGAGGCTGATGAACATTGTCACT GAGATTGCTGGTAGGATGGACTGGGATTATGATGGTCTGCATGTCATCCGAGGGTGGAAG GCACAGAACAAGCAAATGTATCCAAACCTAGATGCCGATACATCACCCGAGGCACTTGTA GATAAGGTTCCAAAACTTATTAAGCAGCCGATGAGAAACCTCTACATTGCGACCAATGAG CCGTTCTATAACTACTTTGATAAGCTCAGGTCATACTTTCATGTGCACTTGCTTGATGAT TACAAGGAGCTTTGGTCGAATACAAGTGAGTGGTACAATGAAACGACAACGCTAAGTGGT GGGAGGCCAGTGCCGTTCGATGCATATATGAGGGTGATTGTGGACACAGAGGTATTCTAT AGAGCAAAGACTCAAGTTGAAACTTTCAACAACTTGACGAGGGATTGCAAGGATGGAATC AATACATGCAACTTGTGA

Peptide Sequence

PEP ID	Os07t0633600-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:26298359:26300541:-1 gene:Os07g0633600 transcript:Os07t0633600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SUB1; calcium ion binding. (Os07t0633600-01);Similar to SUB1 (short under blue light 1). (Os07t0633600-02)
Sequence	MSSSDQDDHDEDAPLFRASSGDDDDHPHPRRRSSPVGEVPVAQSIIKAASNVCFSLFVLA VLVVTVVAVTYQPPDPWLQSSAAITTSLSRVLPNSTFLLPDDSLLPTGEDFNSSSSTPSA PRRDDPDQATATATAAAVNGTCDPDAPLNCSDPRVLAAVKAFNAKAFFRKSIVFLSYEAP VPGPKPGECDVAWRFRNRREKSWRRYRDYRRFVLVPGDGCALDINRVGKFRSGTNAARPP RQKGSKNRNPRVAPPPVDAEINDTIPIVGSEAEFRRGKYLYYMRGGDHCKSMNQFIWSFL CGLGEAKFLNRTFVMDLNMCLSGAHTNNGKDEDGKDFRYYFDFEHLKESVSVVEEGDFLK DWKRWDKKKGPGRISVRKVPSYKVTPMQLKRDKSNIIWRLFDGQEPENYWYRVCEGRAAK VIQRPWYAIWKSKRLMNIVTEIAGRMDWDYDGLHVIRGWKAQNKQMYPNLDADTSPEALV DKVPKLIKQPMRNLYIATNEPFYNYFDKLRSYFHVHLLDDYKELWSNTSEWYNETTTLSG GRPVPFDAYMRVIVDTEVFYRAKTQVETFNNLTRDCKDGINTCNL

Transcript Sequence

Transcript ID	Os07t0633600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:26298359:26300541:-1 gene:Os07g0633600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SUB1; calcium ion binding. (Os07t0633600-01);Similar to SUB1 (short under blue light 1). (Os07t0633600-02)
Sequence	GCCAACCACATCGGGGGGGAGTGTCTCGCACTCTCGTCTCGTCTCACCCACCGCCCCAAA TCTCGCCGCCTCCATTTCTCCCCAGATCCAACTCCGACCATGTCATCCTCCGACCAGGAC GACCACGACGAGGACGCCCCGCTCTTCCGCGCCAGCTCCGGCGACGACGACGACCACCCG CACCCGCGCCGCCGCTCCTCCCCGGTCGGCGAGGTCCCCGTCGCGCAGTCGATCATCAAG GCGGCGAGCAACGTCTGCTTCTCGCTCTTCGTCCTCGCCGTCCTCGTCGTCACCGTCGTC GCCGTCACCTACCAGCCGCCCGACCCCTGGCTCCAGTCCTCCGCCGCCATCACCACCTCC CTCTCCCGCGTCCTCCCCAACTCCACCTTCCTCCTCCCCGACGACTCCCTCCTCCCCACC GGCGAGGACTTCAACTCCTCCTCCTCGACCCCCTCCGCCCCGCGCCGCGACGACCCAGAC CAGGCCACCGCCACCGCCACCGCCGCCGCGGTTAACGGCACCTGCGACCCGGACGCGCCG CTCAACTGCTCCGACCCACGCGTCCTCGCCGCCGTCAAGGCGTTCAATGCCAAGGCCTTC TTCCGCAAGTCCATCGTCTTCCTCAGCTACGAGGCGCCGGTGCCGGGACCCAAGCCCGGG GAGTGCGACGTCGCCTGGCGGTTCAGGAACCGGAGGGAGAAATCTTGGCGCAGGTACAGG GACTACCGCCGCTTCGTCCTTGTCCCCGGCGATGGATGCGCTCTCGACATTAACCGCGTC GGCAAGTTCCGATCCGGGACCAATGCGGCTCGCCCGCCTCGTCAGAAGGGTTCCAAGAAC CGGAACCCGCGCGTCGCGCCGCCGCCAGTGGACGCTGAGATCAACGACACCATCCCAATT GTTGGTTCAGAGGCAGAGTTCAGGAGAGGCAAGTACTTGTACTACATGAGAGGTGGTGAC CATTGCAAGAGCATGAACCAGTTCATATGGAGCTTCTTGTGTGGCCTTGGTGAGGCCAAG TTCTTGAACCGGACTTTCGTGATGGATTTGAACATGTGTCTGTCCGGGGCGCACACGAAC AATGGGAAGGATGAGGATGGGAAGGATTTTAGGTACTATTTTGATTTCGAGCACTTGAAG GAGTCGGTGTCTGTGGTGGAGGAAGGGGACTTCTTGAAAGATTGGAAGCGCTGGGACAAG AAGAAGGGTCCTGGCCGGATCTCGGTGCGGAAGGTACCGTCGTACAAGGTGACTCCAATG CAGCTTAAGAGGGACAAGAGCAACATCATTTGGAGGCTGTTTGATGGGCAGGAGCCTGAG AATTACTGGTACAGGGTGTGTGAGGGGCGAGCCGCTAAGGTCATCCAGCGGCCTTGGTAT GCTATTTGGAAGTCGAAGAGGCTGATGAACATTGTCACTGAGATTGCTGGTAGGATGGAC TGGGATTATGATGGTCTGCATGTCATCCGAGGGTGGAAGGCACAGAACAAGCAAATGTAT CCAAACCTAGATGCCGATACATCACCCGAGGCACTTGTAGATAAGGTTCCAAAACTTATT AAGCAGCCGATGAGAAACCTCTACATTGCGACCAATGAGCCGTTCTATAACTACTTTGAT AAGCTCAGGTCATACTTTCATGTGCACTTGCTTGATGATTACAAGGAGCTTTGGTCGAAT ACAAGTGAGTGGTACAATGAAACGACAACGCTAAGTGGTGGGAGGCCAGTGCCGTTCGAT GCATATATGAGGGTGATTGTGGACACAGAGGTATTCTATAGAGCAAAGACTCAAGTTGAA ACTTTCAACAACTTGACGAGGGATTGCAAGGATGGAATCAATACATGCAACTTGTGACAC ATGAGTTCGTGTTGTGATAATTAGCGATGTCCATATACTCTTCCTTGGCTGGCGCATTGG AATTCAGAGGAACTTCATCCAGGGTTTGTCATTAGGCATATCATCTTAATGTATTTCCTG CCGTACCATGTTCAATTCATTACACGTTGATCTGGATTATGTGCCATCCATTCTTTTTGT GTAATTTATGTATTACTCTTGAGAAGTTTCTTGTAACTTGTTACTGGCCCCTTCGCAAAA TGTTGCCATCTTTATTCCCTTGGAGTTAGCCGGGAACATCTGTTTTGCCACTTATCTGCT ATTATACATGTATTTCTCATGCC