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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0631200-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:26173595:26174381:1 gene:Os07g0631200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os07t0631200-01)
Sequence

ATGGCCACGGCGAACGGCGTCGACCTCGCGACGGCGGGGCTCCTGCGGCTGCTGGCGATG
GGGATGGGGCCGTCCGTGCAGATTCCGGGAGAAGGCGGGGTTCCGGTGATGATGGTGCAG
CACATCATCATCGGCGACGACGGCGGCGACCTGTTCTCCGGCGGGCTCGGCGGCGGCGTG
CCCCCCGCGTCGAAGGCGGCGATCGCCTCGCTGAAGGAGGTGAAGGCCGGGGAGGACGGC
GAAGGCGGGGACTCGCTGGGCGACTGCGCGATCTGCCTGGACGCCTTCGCCGCCGGGAAG
GAGATGCCGTGCGGGCACCGGTTCCACAGCGAGTGCCTCGAGCGGTGGCTCGGCGTCCAC
GGGAGCTGCCCCGTCTGCCGCCGCGAGCTCCCCGCGGCGGAACAACAACCACCAGAGGAG
CAGCAGAGCGGCGGCGCGGACGCCGGCGAGAGGCGGAGGCCGAGGGCGGTGGTGGTGAGC
TACGTGGTGCTCGGAGACGGCGGCCGCGGCGGGGAGAGAGGGGAGCCATGGAACATTAGG
ATAGAGGACGTGGATTAG

Peptide Sequence

PEP ID

Os07t0631200-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:26173595:26174381:1 gene:Os07g0631200 transcript:Os07t0631200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os07t0631200-01)
Sequence

MATANGVDLATAGLLRLLAMGMGPSVQIPGEGGVPVMMVQHIIIGDDGGDLFSGGLGGGV
PPASKAAIASLKEVKAGEDGEGGDSLGDCAICLDAFAAGKEMPCGHRFHSECLERWLGVH
GSCPVCRRELPAAEQQPPEEQQSGGADAGERRRPRAVVVSYVVLGDGGRGGERGEPWNIR
IEDVD

Transcript Sequence

Transcript ID

Os07t0631200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:26173595:26174381:1 gene:Os07g0631200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os07t0631200-01)
Sequence

ATCGCACACAAAAAAACAAAACAAAAAAAGTAGTTGATCTCCTCGCGGCGGCGCTCTCTC
TCTCTCTCCGCCGGCGACGATGGCCACGGCGAACGGCGTCGACCTCGCGACGGCGGGGCT
CCTGCGGCTGCTGGCGATGGGGATGGGGCCGTCCGTGCAGATTCCGGGAGAAGGCGGGGT
TCCGGTGATGATGGTGCAGCACATCATCATCGGCGACGACGGCGGCGACCTGTTCTCCGG
CGGGCTCGGCGGCGGCGTGCCCCCCGCGTCGAAGGCGGCGATCGCCTCGCTGAAGGAGGT
GAAGGCCGGGGAGGACGGCGAAGGCGGGGACTCGCTGGGCGACTGCGCGATCTGCCTGGA
CGCCTTCGCCGCCGGGAAGGAGATGCCGTGCGGGCACCGGTTCCACAGCGAGTGCCTCGA
GCGGTGGCTCGGCGTCCACGGGAGCTGCCCCGTCTGCCGCCGCGAGCTCCCCGCGGCGGA
ACAACAACCACCAGAGGAGCAGCAGAGCGGCGGCGCGGACGCCGGCGAGAGGCGGAGGCC
GAGGGCGGTGGTGGTGAGCTACGTGGTGCTCGGAGACGGCGGCCGCGGCGGGGAGAGAGG
GGAGCCATGGAACATTAGGATAGAGGACGTGGATTAGGACCAGGATTATATTCTTCAAAT
TGGTTTCAATTGGTTTTAAGGTGGTCGATTTTTCTTTCGGTTTTTGTATATACACTACTA
GCTGCGAGGGGAGAAAAATCGATTGTGAATATTTTTTAAATGTGGAAAATGAAAGTAATG
CAATTAC