Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0626200-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:25931608:25936487:1 gene:Os07g0626200 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-binding SAP domain containing protein. (Os07t0626200-01);Hypothetical conserved gene. (Os07t0626200-02)
Sequence

ATGTCAACGTGTCCTGTGCTGAATGACCGACCAATTGATGAGTGGAAGGTTACTGAATTG
AAGGATGAGCTCCGTAGGAGGGATCTATCTATTAAAGGTTTGAAGGATGATCTTGTGAAG
AGGCTTGCTGAGGCCCTTCAGGGGGAGGTTATTGATGGCGGGGAAGAAACAGTCAATGGA
ACTCCCCCTGTGGAGAATCAGACACAAGACGGAGCTCTTGTTTTAGATGATGCATCTGGT
TTCCAGGCTTCAGCAGAACAAAATGTTGATGAAGGCCCTGCTGAGGTTGCTGCAAAGAAT
GAAGGCCTTGTCTCTGTTATAGAAGCTAGTACAGAGGGCGGAACTCTTGTTTTAGATGAT
GGATCTGGTTTCCAGGCTTCAACGGAACAAAATGTTGATGAAGGTCCTGCTGAGGTTGCT
GCAAAGAATGAAGGCCTTGCCTCTGTTACAGAAGCTAGTACAGAGGACGGAACTCTTGTT
TTAGCTGATGCATCTGGTATCCAGGCTTCAACGGAACAAAATGTTGATGAAGGTCCTTCT
GAGGTTGCTGCAAAGAATGATACCAGTACTAATACCAAGTTGGAGGAATCATCTGCTAAA
GGTGAACCATGTGTCAGTATAGGCTGTGAGATTCTAGAACAGGAAACGAAATCATCACAT
CTTGATGTTATTTTGTCACATGCTGACGCTGTTGCAAGTGCAGAGGAAATGATTACAGAG
AGCCTGATTCTTAAGAAAGATTCCAATGAGAATGATTTAATGTATGAGAAGGACCAAAAG
GATTCTGACCACATAAGCACTGACTGCAAACCCGAGCAGTCTGGACCAAAGGATCAGGTA
TCTGAAGTCAACCAAGATCTAGAGTCTCAAATTAAGTGTGTGTCAATTTCTCCTGATGAT
ATACTAGTCAATAAAAACGACAATGTAGAAGGCAACATGAACGCTGACAATTTTGATTTA
GGACTAGAGTCTAAGCAGGATATTGTCAAGCCATCATCCAGCAATCCCTCCTCCGTTGGT
GATGATTTGCAGACACCAGATGATGACAAAGAGATATCTCTGATCGACATGTCTCTGCAA
GATACTGATATGAGCTTGAAAAAGAAAGAAGGCAGTCCTGATAGTATTTATCCTGAAAAA
CTAAATTTGGATAGGAGTTCAGGAGATGAATCAATGGAGGAGGATGCGATGGAAACTAAG
CACATGGATTCCAAAACAATACCTGATTATCTCGAAGGAAAGAGTGAGGTCACCTTAGAG
CATGTGAGTTCAGGAGATGAATCAATGGAGGAGGATGTGATGGAAACTAAGCACGTGGAT
TCCAATACAAAAGTTGAACATGTGAGTTCAGGAGATGAATCAATGGAGGAGGATGTGATG
GAAACTAAGCACGTGGATTCCAATACAAAACCTGATTATCTCGAAGGAAAGAATGATGTC
ACCTTAGAGCATGTGGTAAAAGAGGTGATCCTCCTTGATACTGTCACTGAGGGTTCATCT
GTAGATCAAAAGGAAGCTATAAGTCAAGAGAAGCCAGTAATGCCGACTGAAAAGAGGAAA
GCTGAAGATCAAGAAGTTGTTGCAAATAATGAGCCAATCAAACGTCAGCGCCTATGGAAT
GTGGATGATGTCAAACCTGAGCAAGCAACTTCCAAACTAAGTGGTTCTGATGCTTCTAAA
GTTGTACACCCGCCTGCTCGAAGACGTTCTTTTGGCAGGTCTGATTCAACAGCACGTGGA
AATTCTCCGAAGGAGAGGATGGTACCACCGCCTCAGAAACCTGCAACAACTTCCTTGAGA
ATCGATCGATTTGTGCGCCCGTTCACTTTGAAAGCTGTGCAAGAGCTTCTTGGTAAAACT
GGATCTGTTTGTAGCTTTTGGATGGATCCTATCAAGACTCATTGCTATGTCACATTCTCT
TCGGTGGAGGAAGCTCTGGCTACCAGGAATGCTGTTTACAATCTCCAATGGCCTCCAAAC
AATGGCAGTTCCTTAGTTGCTGAATTCGTTGATCCACATGAGGTGAAGGCCAAACTTGAA
CCCCCTCCCCCACCTCCAGCACCTATCAACCCCACAGCAGCTACAGCACCTTCCCACCAA
TCCAAGGCCAACCAAATCATGCCTCCTCATGCTGCTGATACATCAAGGGGGCTATTACCC
ACACCACCAGCACTTGCTAGGCTTCCAACCTTCAACAACGCACCAGCGAGGGAGATGCTT
CCGCCCGCTCCAAAGAACCCAGAACCACCTGTGGTGGTGACTCTTGATGATCTCTTTAGG
AAGACACAGGCCTCTCCGAGGATCTACTACATGCCTGTTTCAGAAGAGGTGGTATCTGCC
AAGCTTGCAGCACGCGGCAAAGGGAAGAAGGCAGCGTAG

Peptide Sequence

PEP ID

Os07t0626200-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:25931608:25936487:1 gene:Os07g0626200 transcript:Os07t0626200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-binding SAP domain containing protein. (Os07t0626200-01);Hypothetical conserved gene. (Os07t0626200-02)
Sequence

MSTCPVLNDRPIDEWKVTELKDELRRRDLSIKGLKDDLVKRLAEALQGEVIDGGEETVNG
TPPVENQTQDGALVLDDASGFQASAEQNVDEGPAEVAAKNEGLVSVIEASTEGGTLVLDD
GSGFQASTEQNVDEGPAEVAAKNEGLASVTEASTEDGTLVLADASGIQASTEQNVDEGPS
EVAAKNDTSTNTKLEESSAKGEPCVSIGCEILEQETKSSHLDVILSHADAVASAEEMITE
SLILKKDSNENDLMYEKDQKDSDHISTDCKPEQSGPKDQVSEVNQDLESQIKCVSISPDD
ILVNKNDNVEGNMNADNFDLGLESKQDIVKPSSSNPSSVGDDLQTPDDDKEISLIDMSLQ
DTDMSLKKKEGSPDSIYPEKLNLDRSSGDESMEEDAMETKHMDSKTIPDYLEGKSEVTLE
HVSSGDESMEEDVMETKHVDSNTKVEHVSSGDESMEEDVMETKHVDSNTKPDYLEGKNDV
TLEHVVKEVILLDTVTEGSSVDQKEAISQEKPVMPTEKRKAEDQEVVANNEPIKRQRLWN
VDDVKPEQATSKLSGSDASKVVHPPARRRSFGRSDSTARGNSPKERMVPPPQKPATTSLR
IDRFVRPFTLKAVQELLGKTGSVCSFWMDPIKTHCYVTFSSVEEALATRNAVYNLQWPPN
NGSSLVAEFVDPHEVKAKLEPPPPPPAPINPTAATAPSHQSKANQIMPPHAADTSRGLLP
TPPALARLPTFNNAPAREMLPPAPKNPEPPVVVTLDDLFRKTQASPRIYYMPVSEEVVSA
KLAARGKGKKAA

Transcript Sequence

Transcript ID

Os07t0626200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:25931608:25936487:1 gene:Os07g0626200 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-binding SAP domain containing protein. (Os07t0626200-01);Hypothetical conserved gene. (Os07t0626200-02)
Sequence

ACTGCCTCCTGAGTCCTGACTCCCCCCGAGCGCCAGTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCCTCTCGCACGCCTCGGCGGAGCGGAGCGGAGAGCAACAAAAGCGCAAAAACC
CTCGTAGAGATCGAAACCGCCGCGGCGGGGTGGGATCGCGTGTTCCGATCGTGCGGAGGC
CTCCCGCTCTTATCGAGAGGCTTTCGATCCGCTTGCGATTTTTTTTCTGGGATTTTTTTG
GTGCATTTTTTTCGGTTTTTTTGTTTTCCATTTCAGGTGGCGCGTGGGGGATCGGTGGAT
TCCTGGAGTTGCTGGTCGGTGGAAATCGTTTCTCTTCGTGTGCGCGTTTGCGTTTGTTCT
GGGGTTTTTGTTTTGGGTGGTGGGTTTTGATCCGGTTGCTGCGGGCTTGTAGGTTGGATT
TTGCGGTTTGGGAGAAAGTCACAATGTCAACGTGTCCTGTGCTGAATGACCGACCAATTG
ATGAGTGGAAGGTTACTGAATTGAAGGATGAGCTCCGTAGGAGGGATCTATCTATTAAAG
GTTTGAAGGATGATCTTGTGAAGAGGCTTGCTGAGGCCCTTCAGGGGGAGGTTATTGATG
GCGGGGAAGAAACAGTCAATGGAACTCCCCCTGTGGAGAATCAGACACAAGACGGAGCTC
TTGTTTTAGATGATGCATCTGGTTTCCAGGCTTCAGCAGAACAAAATGTTGATGAAGGCC
CTGCTGAGGTTGCTGCAAAGAATGAAGGCCTTGTCTCTGTTATAGAAGCTAGTACAGAGG
GCGGAACTCTTGTTTTAGATGATGGATCTGGTTTCCAGGCTTCAACGGAACAAAATGTTG
ATGAAGGTCCTGCTGAGGTTGCTGCAAAGAATGAAGGCCTTGCCTCTGTTACAGAAGCTA
GTACAGAGGACGGAACTCTTGTTTTAGCTGATGCATCTGGTATCCAGGCTTCAACGGAAC
AAAATGTTGATGAAGGTCCTTCTGAGGTTGCTGCAAAGAATGATACCAGTACTAATACCA
AGTTGGAGGAATCATCTGCTAAAGGTGAACCATGTGTCAGTATAGGCTGTGAGATTCTAG
AACAGGAAACGAAATCATCACATCTTGATGTTATTTTGTCACATGCTGACGCTGTTGCAA
GTGCAGAGGAAATGATTACAGAGAGCCTGATTCTTAAGAAAGATTCCAATGAGAATGATT
TAATGTATGAGAAGGACCAAAAGGATTCTGACCACATAAGCACTGACTGCAAACCCGAGC
AGTCTGGACCAAAGGATCAGGTATCTGAAGTCAACCAAGATCTAGAGTCTCAAATTAAGT
GTGTGTCAATTTCTCCTGATGATATACTAGTCAATAAAAACGACAATGTAGAAGGCAACA
TGAACGCTGACAATTTTGATTTAGGACTAGAGTCTAAGCAGGATATTGTCAAGCCATCAT
CCAGCAATCCCTCCTCCGTTGGTGATGATTTGCAGACACCAGATGATGACAAAGAGATAT
CTCTGATCGACATGTCTCTGCAAGATACTGATATGAGCTTGAAAAAGAAAGAAGGCAGTC
CTGATAGTATTTATCCTGAAAAACTAAATTTGGATAGGAGTTCAGGAGATGAATCAATGG
AGGAGGATGCGATGGAAACTAAGCACATGGATTCCAAAACAATACCTGATTATCTCGAAG
GAAAGAGTGAGGTCACCTTAGAGCATGTGAGTTCAGGAGATGAATCAATGGAGGAGGATG
TGATGGAAACTAAGCACGTGGATTCCAATACAAAAGTTGAACATGTGAGTTCAGGAGATG
AATCAATGGAGGAGGATGTGATGGAAACTAAGCACGTGGATTCCAATACAAAACCTGATT
ATCTCGAAGGAAAGAATGATGTCACCTTAGAGCATGTGGTAAAAGAGGTGATCCTCCTTG
ATACTGTCACTGAGGGTTCATCTGTAGATCAAAAGGAAGCTATAAGTCAAGAGAAGCCAG
TAATGCCGACTGAAAAGAGGAAAGCTGAAGATCAAGAAGTTGTTGCAAATAATGAGCCAA
TCAAACGTCAGCGCCTATGGAATGTGGATGATGTCAAACCTGAGCAAGCAACTTCCAAAC
TAAGTGGTTCTGATGCTTCTAAAGTTGTACACCCGCCTGCTCGAAGACGTTCTTTTGGCA
GGTCTGATTCAACAGCACGTGGAAATTCTCCGAAGGAGAGGATGGTACCACCGCCTCAGA
AACCTGCAACAACTTCCTTGAGAATCGATCGATTTGTGCGCCCGTTCACTTTGAAAGCTG
TGCAAGAGCTTCTTGGTAAAACTGGATCTGTTTGTAGCTTTTGGATGGATCCTATCAAGA
CTCATTGCTATGTCACATTCTCTTCGGTGGAGGAAGCTCTGGCTACCAGGAATGCTGTTT
ACAATCTCCAATGGCCTCCAAACAATGGCAGTTCCTTAGTTGCTGAATTCGTTGATCCAC
ATGAGGTGAAGGCCAAACTTGAACCCCCTCCCCCACCTCCAGCACCTATCAACCCCACAG
CAGCTACAGCACCTTCCCACCAATCCAAGGCCAACCAAATCATGCCTCCTCATGCTGCTG
ATACATCAAGGGGGCTATTACCCACACCACCAGCACTTGCTAGGCTTCCAACCTTCAACA
ACGCACCAGCGAGGGAGATGCTTCCGCCCGCTCCAAAGAACCCAGAACCACCTGTGGTGG
TGACTCTTGATGATCTCTTTAGGAAGACACAGGCCTCTCCGAGGATCTACTACATGCCTG
TTTCAGAAGAGGTGGTATCTGCCAAGCTTGCAGCACGCGGCAAAGGGAAGAAGGCAGCGT
AGGGTGGCTCAAATTTGCTGCTGCTGCTGCTGCCATGAGTGGTACAATTTGACACTTGAA
GAGGCTTTTGCAAGGGTTAGGTCTTGAGAGCCGAGAAGGTCATTTTGGTTGTACATACAA
CTAGGTGTAGTTTTCTGCATCTCCGAAACTGTTAGCTGTTGCTCGCCCATGCCGATCTGG
ATTGTATGTTAATTGTGCACCTTTTGATCGATGGAGACGATGCTTACCTTCAATGTTGAT
GAACTGGGGGAATGCATATGTGCTAAGTCGCAGCATTTCCCCCCTAAACTCGTCGCGC