Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0623400-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:25797988:25800742:-1 gene:Os07g0623400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to transcription elongation factor SPT4. (Os07t0623400-00)
Sequence

ATGAGGGGCGGCGGCGGCGGCGGTGGCGGCGACGGGATGATGGACGACGGGCCCAAGTAC
GCGCAGATACCGACGAGCTTCGGCCACGAGCTCCGCGCGTGCCTCCGCTGCCGCCTCGTC
AAGACCTACGATCAGTTCATGGAGCAAGGCTGCGAGAACTGCCCCTTCCTCGACATGGAA
AGGGATCACGACAACGTCGTCAACTGCACCACCCCCAACTTCACAGGAATAATCTCCGTG
ATGGATCCTGGTAGGAGTTGGGCTGCTCGTTGGTTGAGAATTGGGAAGTTCATCCCTGGG
TGCTATACGCTGGCTGTCGCGGAGGAGCTTCCGGAGGAGTACCAAAGCGTTTGCCAAGAC
AACAATGTGCAATACTTCCCTCCGAAGCGTGTCTGA

Peptide Sequence

PEP ID

Os07t0623400-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:25797988:25800742:-1 gene:Os07g0623400 transcript:Os07t0623400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to transcription elongation factor SPT4. (Os07t0623400-00)
Sequence

MRGGGGGGGGDGMMDDGPKYAQIPTSFGHELRACLRCRLVKTYDQFMEQGCENCPFLDME
RDHDNVVNCTTPNFTGIISVMDPGRSWAARWLRIGKFIPGCYTLAVAEELPEEYQSVCQD
NNVQYFPPKRV

Transcript Sequence

Transcript ID

Os07t0623400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:25797988:25800742:-1 gene:Os07g0623400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to transcription elongation factor SPT4. (Os07t0623400-00)
Sequence

GAGAGAGAGAGAGAGAAGCTGGAGAGGATGAGGGGCGGCGGCGGCGGCGGTGGCGGCGAC
GGGATGATGGACGACGGGCCCAAGTACGCGCAGATACCGACGAGCTTCGGCCACGAGCTC
CGCGCGTGCCTCCGCTGCCGCCTCGTCAAGACCTACGATCAGTTCATGGAGCAAGGCTGC
GAGAACTGCCCCTTCCTCGACATGGAAAGGGATCACGACAACGTCGTCAACTGCACCACC
CCCAACTTCACAGGAATAATCTCCGTGATGGATCCTGGTAGGAGTTGGGCTGCTCGTTGG
TTGAGAATTGGGAAGTTCATCCCTGGGTGCTATACGCTGGCTGTCGCGGAGGAGCTTCCG
GAGGAGTACCAAAGCGTTTGCCAAGACAACAATGTGCAATACTTCCCTCCGAAGCGTGTC
TGAACAAGCCATATATAGTCCCTTCAAGAGAACAGCGTGCCTGAACAACCTATATTCCCT
TCGGAGCGTCACGATCCTGAAGCAAATACTATGCACGTGTTTTTATCTAGATACATTCCT
TGCCAAGGGAACTGCTGTTACCTGTTGTGTCCATGCTTAGAGCAGCTAATCAGCAATTGA
CCGTGCACCTTCTGTACTTGAACAACTCAAGAG