Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0623000-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:25774523:25775231:-1 gene:Os07g0623000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF343 family protein. (Os07t0623000-01)
Sequence

ATGAGGCTCCTGACGCACAACATGCTGGCGTCGAACGCGCGGGGCGCGGTGACGGGCTAC
CCGCTGAAGCTGCAGGTGGTGAAGTGGTCGACCAAGGAGGCGGAGCCCAACCCGGAGTTC
CTCCGCGGCATGCTCCCCAAGATCGACTGGCCCGCGCTCGTCGCCGCCACCCAGGCCCTC
GGCCTCCCGGAGCTCCTCCCCGAGGCGCCCCCCACCGACGCCGAGCTCTCCGCCGAGGGC
GCCGCCGCCGACGAGGGCAGCGCGCTCCGCCGCCTCCACCGCGCGCTCCTCGAGATCCAC
ATCGAGGAGGGCGCCCTCGTCTGCCCCGACACCGACCGCTGCTTCCCCATCTCCAGGGGC
GTCCCCAACATGCTCCTCCACGAGGACGAGGTGAGGAACTGA

Peptide Sequence

PEP ID

Os07t0623000-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:25774523:25775231:-1 gene:Os07g0623000 transcript:Os07t0623000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF343 family protein. (Os07t0623000-01)
Sequence

MRLLTHNMLASNARGAVTGYPLKLQVVKWSTKEAEPNPEFLRGMLPKIDWPALVAATQAL
GLPELLPEAPPTDAELSAEGAAADEGSALRRLHRALLEIHIEEGALVCPDTDRCFPISRG
VPNMLLHEDEVRN

Transcript Sequence

Transcript ID

Os07t0623000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:25774523:25775231:-1 gene:Os07g0623000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF343 family protein. (Os07t0623000-01)
Sequence

CGCCTCCCGCTTGCTAGGGTTTATACCGCCGCCGCCGCCACCGCCGCAGCAACAGCAGCC
GGCGGCGTGAGGAGGAGAAGAGGCGACCTAGGTCGAATTCGAGGTCGAGGGAGATGAGGC
TCCTGACGCACAACATGCTGGCGTCGAACGCGCGGGGCGCGGTGACGGGCTACCCGCTGA
AGCTGCAGGTGGTGAAGTGGTCGACCAAGGAGGCGGAGCCCAACCCGGAGTTCCTCCGCG
GCATGCTCCCCAAGATCGACTGGCCCGCGCTCGTCGCCGCCACCCAGGCCCTCGGCCTCC
CGGAGCTCCTCCCCGAGGCGCCCCCCACCGACGCCGAGCTCTCCGCCGAGGGCGCCGCCG
CCGACGAGGGCAGCGCGCTCCGCCGCCTCCACCGCGCGCTCCTCGAGATCCACATCGAGG
AGGGCGCCCTCGTCTGCCCCGACACCGACCGCTGCTTCCCCATCTCCAGGGGCGTCCCCA
ACATGCTCCTCCACGAGGACGAGGTGAGGAACTGACTCGCGTGTGCCTCACCTTGGTTTC
TCCTCGCATAGTGTTCCATGGCTTTACAACTCTTAAATTGGATGTATCAAGTGTGGAACG
CGGAGATTATAATCCGATAGATACTTAAGATGTTTGGCTTGTAATCGTACTTTAATGTCA
GTAATGGGTGCTCCAATCTCATGCTATATATTCTTATTGTTGGTTGAGT