Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0622200-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:25726437:25730027:-1 gene:Os07g0622200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phospho-2-dehydro-3-deoxyheptonate aldolase, 3-deoxy-D-arabinoheptulosonate 7-phosphate synthase, 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2 description:3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase, Chorismate biosynthesis (Os07t0622200-01)
Sequence	ATGGCGCTCGCCACCAACTCCGCCGCTGTTTCCGGTGGCGCTGCGGCCGCGGCGTCGTCG GCGCCCCAGCCGCGGCTCGCCGCCACGTTCCTCCCGATGAGGAGGCGAACCGTCTCGGCG GTCCACGCGGCCGACCCGGCGAAGAGCAACGGGCCCGTGCAGGCCGCGGCGAAGGCCTCG TCCCCGTCGACGGTGGCGGCGCCGGAGAAGAAGCCGGTGGGGTTGGGGAAGTGGACGGTG GATAGCTGGAAGGCGAAGAAGGCGCTGCAGCTGCCCGAGTACCCGAGCCAGGAGGAGCTC GACTCCGTGCTCAAGACGATCGAGACGTTCCCGCCCGTGGTGTTCGCCGGGGAGGCGCGC CACCTCGAGGAGCGCCTCGCCGACGCCGCCATGGGCCGCGCCTTCGTCCTCCAGGGCGGC GACTGCGCCGAGAGCTTCAAGGAGTTCAACGCCAACAACATCCGTGACACCTTCCGCATC CTGCTCCAGATGGGCGCCGTCCTCATGTTCGGCGGCCAGATGCCCGTCGTCAAGGTCGGG AGGATGGCTGGCCAGTTCGCCAAGCCGAGGTCTGATTCGTTCGAGGAGAGGGACGGGGTT AAGCTGCCGAGTTACAGGGGAGACAACATCAATGGCGACACCTTCGACGAGAAGAGCCGC GTGCCGGACCCGCAGCGGATGATCCGCGCGTACGCGCAGTCGGTGGCAACGCTCAACCTG CTCCGCGCCTTCGCCACGGGAGGGTACGCCGCCATGCAGCGCGTCACGCAGTGGAACCTC GATTTCATGGATCACAGCGAACAAGGAGACAGGTACCGTGAATTGGCACACCGGGTGGAT GAGGCACTTGGCTTCATGACTGCAGCAGGGCTAACAGTCGACCATCCGATAATGACAACA ACTGACTTCTGGACATCCCATGAGTGCCTCCTCTTACCATATGAGCAGTCTCTTACACGT GAGGATTCCACCAGTGGCCTCTTCTATGACTGCTCAGCCCACATGCTATGGGTTGGTGAG CGCACTCGCCAGCTCGATGGAGCTCATGTTGAATTTCTCCGTGGTGTTGCCAACCCTCTT GGCATAAAGGTGAGTGACAAAATGAACCCCCGTGACTTGGTGAAGCTCATTGAGATTTTG AACCCATCAAACAAGCCTGGAAGGATAACCATAATTACAAGAATGGGGGCAGAGAACATG AGGGTGAAATTGCCTCATCTTATCCGTGCTGTCCGCAACTCTGGACAGATTGTCACATGG ATTACTGATCCCATGCATGGAAACACCATCAAGGCTCCATGTGGTCTGAAGACTCGTCCA TTCGATTCCATTCTGGCTGAAGTACGTGCGTTCTTCGATGTCCATGATCAAGAAGGTAGC CACCCAGGAGGTATCCACCTGGAAATGACTGGGCAGAACGTGACTGAATGCATCGGTGGA TCAAGGACCGTCACCTTCGATGACCTGAGCGACCGCTACCACACCCACTGTGACCCAAGG CTGAACGCGTCGCAATCCCTGGAGCTCGCCTTCATCATCGCCGAGAGACTGAGGCGGAGG AGGATGCGGTCCGGGGTCAACAGCAACCTGCCATTGCCCCCATTGGCTTTCTAA

Peptide Sequence

PEP ID	Os07t0622200-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:25726437:25730027:-1 gene:Os07g0622200 transcript:Os07t0622200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phospho-2-dehydro-3-deoxyheptonate aldolase, 3-deoxy-D-arabinoheptulosonate 7-phosphate synthase, 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2 description:3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase, Chorismate biosynthesis (Os07t0622200-01)
Sequence	MALATNSAAVSGGAAAAASSAPQPRLAATFLPMRRRTVSAVHAADPAKSNGPVQAAAKAS SPSTVAAPEKKPVGLGKWTVDSWKAKKALQLPEYPSQEELDSVLKTIETFPPVVFAGEAR HLEERLADAAMGRAFVLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVVKVG RMAGQFAKPRSDSFEERDGVKLPSYRGDNINGDTFDEKSRVPDPQRMIRAYAQSVATLNL LRAFATGGYAAMQRVTQWNLDFMDHSEQGDRYRELAHRVDEALGFMTAAGLTVDHPIMTT TDFWTSHECLLLPYEQSLTREDSTSGLFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPL GIKVSDKMNPRDLVKLIEILNPSNKPGRITIITRMGAENMRVKLPHLIRAVRNSGQIVTW ITDPMHGNTIKAPCGLKTRPFDSILAEVRAFFDVHDQEGSHPGGIHLEMTGQNVTECIGG SRTVTFDDLSDRYHTHCDPRLNASQSLELAFIIAERLRRRRMRSGVNSNLPLPPLAF

Transcript Sequence

Transcript ID	Os07t0622200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:25726437:25730027:-1 gene:Os07g0622200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phospho-2-dehydro-3-deoxyheptonate aldolase, 3-deoxy-D-arabinoheptulosonate 7-phosphate synthase, 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2 description:3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase, Chorismate biosynthesis (Os07t0622200-01)
Sequence	AGAGGAGCCCCGCCTACCGCCGCCCTCACGCCTCCTCCCACCTACCTCACCTCGAAGCTG ACGTCAGCAATGGCGCTCGCCACCAACTCCGCCGCTGTTTCCGGTGGCGCTGCGGCCGCG GCGTCGTCGGCGCCCCAGCCGCGGCTCGCCGCCACGTTCCTCCCGATGAGGAGGCGAACC GTCTCGGCGGTCCACGCGGCCGACCCGGCGAAGAGCAACGGGCCCGTGCAGGCCGCGGCG AAGGCCTCGTCCCCGTCGACGGTGGCGGCGCCGGAGAAGAAGCCGGTGGGGTTGGGGAAG TGGACGGTGGATAGCTGGAAGGCGAAGAAGGCGCTGCAGCTGCCCGAGTACCCGAGCCAG GAGGAGCTCGACTCCGTGCTCAAGACGATCGAGACGTTCCCGCCCGTGGTGTTCGCCGGG GAGGCGCGCCACCTCGAGGAGCGCCTCGCCGACGCCGCCATGGGCCGCGCCTTCGTCCTC CAGGGCGGCGACTGCGCCGAGAGCTTCAAGGAGTTCAACGCCAACAACATCCGTGACACC TTCCGCATCCTGCTCCAGATGGGCGCCGTCCTCATGTTCGGCGGCCAGATGCCCGTCGTC AAGGTCGGGAGGATGGCTGGCCAGTTCGCCAAGCCGAGGTCTGATTCGTTCGAGGAGAGG GACGGGGTTAAGCTGCCGAGTTACAGGGGAGACAACATCAATGGCGACACCTTCGACGAG AAGAGCCGCGTGCCGGACCCGCAGCGGATGATCCGCGCGTACGCGCAGTCGGTGGCAACG CTCAACCTGCTCCGCGCCTTCGCCACGGGAGGGTACGCCGCCATGCAGCGCGTCACGCAG TGGAACCTCGATTTCATGGATCACAGCGAACAAGGAGACAGGTACCGTGAATTGGCACAC CGGGTGGATGAGGCACTTGGCTTCATGACTGCAGCAGGGCTAACAGTCGACCATCCGATA ATGACAACAACTGACTTCTGGACATCCCATGAGTGCCTCCTCTTACCATATGAGCAGTCT CTTACACGTGAGGATTCCACCAGTGGCCTCTTCTATGACTGCTCAGCCCACATGCTATGG GTTGGTGAGCGCACTCGCCAGCTCGATGGAGCTCATGTTGAATTTCTCCGTGGTGTTGCC AACCCTCTTGGCATAAAGGTGAGTGACAAAATGAACCCCCGTGACTTGGTGAAGCTCATT GAGATTTTGAACCCATCAAACAAGCCTGGAAGGATAACCATAATTACAAGAATGGGGGCA GAGAACATGAGGGTGAAATTGCCTCATCTTATCCGTGCTGTCCGCAACTCTGGACAGATT GTCACATGGATTACTGATCCCATGCATGGAAACACCATCAAGGCTCCATGTGGTCTGAAG ACTCGTCCATTCGATTCCATTCTGGCTGAAGTACGTGCGTTCTTCGATGTCCATGATCAA GAAGGTAGCCACCCAGGAGGTATCCACCTGGAAATGACTGGGCAGAACGTGACTGAATGC ATCGGTGGATCAAGGACCGTCACCTTCGATGACCTGAGCGACCGCTACCACACCCACTGT GACCCAAGGCTGAACGCGTCGCAATCCCTGGAGCTCGCCTTCATCATCGCCGAGAGACTG AGGCGGAGGAGGATGCGGTCCGGGGTCAACAGCAACCTGCCATTGCCCCCATTGGCTTTC TAAACTGCTGAAACGGGGGAAGGGAAAAGAAACTGGGAGGAGGGGGTAGAATAGTTTCAA CTCGCCGGCGGTGATATCTGCATGTGTTCTGTCAAATGTTTGTATGGTGGTTGTTGAGTG TTCTTGGCACTATAGGCAGTTGTCGAGGATATGGTAGCATATATACTCGCCGTGTTGTAA TAAGTTTTTTGATGGATGTGTTCTGATGAATTTTTAAGGGGGCCTCAGCTCTGTGCTGTT TGGCCTTGGGGACAGGAGAAAATAAAGCTAGATGGTTTGCTTGGTT