Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0621100-00
CDS Infomation	cds chromosome:IRGSP-1.0:7:25672201:25674075:1 gene:Os07g0621100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0621100-00)
Sequence	ATGGCGAGGCGCGCGAGGCTCCGGCTCCGGCTCGTCCGCGCCCTCGCCACGGCCTCCGCG TCCGGATCGCCTGCGGCGCCGCGGCCGGCGAGGCAAGCGGCGCCCTACCTGGCGGTGCTC CACCGCCGCGGGAGGGCGGAGGCGGCGGCGTGCCTGAACCGCCACCTCCGCCTGCTCCCG CTCGGGGAGGCGACCTCGCTCCTCGACGCGCTCCCGTCCGTCCGCGACGCCGTCTCCTAC AACACCGTGCTCACCGCGCTCTGCCGCCGCGGCCACCACGACCGCGCGGGCGCGCTGCTC CGCGCCATGTCCCTGGAGCCCCACCCGGCGTGCCGCCCCAACGCCGTCTCCTACACCGTC CTCATGCGCGCGCTCTGCGCCGACCGCCTCGCGGACCAGGCCGTCGGGCTGCTGCGGTCC ATGCGGTCCGCCGGCGTCCGCGCCGACGTGGTCACCTACGGCACCCTCATCCGTGGGCTG TGCGACGCCGCGGAAGTGGACAAGGCCGTGGAGCTGATGGGCGAGATGTGCGAAAGTGGC ATCGAGCCTAACGTGGTGGTGTACAGCTCTTTGCTCCAAGGGTATTGCAAGTCTGGGCGG TGGGAGGATGTAGGCAAGGTGTTCGTGGAAATGTCCGAGAAGGGAATAGAGCCGGATGTG GTGATGTACACTGGGTTGATCGATAGCCTTTGTAAAGTGGGGAAGGCAAAGAAGGCGCAC GGGGTGATGGACATGATGGTGAGGAGGGGGTTGGAGCCAAATGTGGTTACGTACAACGTG CTCATCAATTGCATGTGCAAGGAAGGTTCAGTGAAGGAGGCAATCGGTGTGCTGAAGAAG ATGTCCGAGAAGGGAGTGGCGCCGGATGTTGTGACATATAACACACTGATCAAGGGGCTC TCGGATGTGCTCGAGATGGATGAAGCAATGTGGTTGCTTGAGGAGATGGTTCGAGGTAAG AATATAGTTAAGCCTAATGTGGTGACATTCAACTCGGTTATACAGGGCCTTTGTGATATT GGTAGGATGAGGCAAGCGTTCCAAGTCCGTGCGATGATGGAAGAGACTGGGTGTATGGTT AACTTGGTGACATACAATCTGCTGATTGGTGGACTCCTTAGAGTCCACAAGGTAAGGAAG GCTATGGAGCTGATGGATGAGATGACTAGTCTAGGGCTGGAGCCTGATTCATTCACCTAT AGTATACTGATAAAGGGTTTCTGCAAAATGTGGCAAGTTGACCGTGCAGAAGATCTTTTA TCTACAATGAGAGATCGTGGGATAGAACCTGAGCTATTTCACTATATTCCTTTGCTTGTA GCCATGTGTGAACAGGGTATGATGGAACGAGCGAGGAATTTGTTCAATGAAATGGACAAC AACTTTCCACTAGATGTGGTTGCATATAGCACTATGATCCATGGTGCTTGCAAAGCAGGG GACTTGAAAACTGCAAAAGAGTTGCTTAAGAGCATAGTTGATGAGGGACTGACTCCTGAT GCTGTTACATATTCTATAGTAATCAATATGTTTGCTAAATCTGGAGACATGGAGGCGGCA AATGGTGTGCTTAAACAGATGACAGCAAGTGGCTTTTTGCCTGACGTTGCCGTATTTGAT TCACTGATCCAAGGTTATAGCACAAAAGGAGAGATAAACAAGGTTCTCGAGTTAATTCGG GAAATGATAACAAAGAATATAGCACTTGATTCAAAAATTATTTCCACTCTTTCCACTTCT CTGGTTGCAAGCAATGAAGGCAAAGCATTGTTGCAGAGCTTGCCTGATTTCAGTGCAGAA ATATCAAAAGGCAACATCAATTCACCCCAGGAGTTAATGAAAGTGTTGCATAATGTGTGC CCCCAAACAAATTAA

Peptide Sequence

PEP ID	Os07t0621100-00
PEP Infomation	pep chromosome:IRGSP-1.0:7:25672201:25674075:1 gene:Os07g0621100 transcript:Os07t0621100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0621100-00)
Sequence	MARRARLRLRLVRALATASASGSPAAPRPARQAAPYLAVLHRRGRAEAAACLNRHLRLLP LGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTV LMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAH GVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL SDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMV NLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLL STMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAG DLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFD SLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPDFSAE ISKGNINSPQELMKVLHNVCPQTN

Transcript Sequence

Transcript ID	Os07t0621100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:25672201:25674075:1 gene:Os07g0621100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0621100-00)
Sequence	ATGGCGAGGCGCGCGAGGCTCCGGCTCCGGCTCGTCCGCGCCCTCGCCACGGCCTCCGCG TCCGGATCGCCTGCGGCGCCGCGGCCGGCGAGGCAAGCGGCGCCCTACCTGGCGGTGCTC CACCGCCGCGGGAGGGCGGAGGCGGCGGCGTGCCTGAACCGCCACCTCCGCCTGCTCCCG CTCGGGGAGGCGACCTCGCTCCTCGACGCGCTCCCGTCCGTCCGCGACGCCGTCTCCTAC AACACCGTGCTCACCGCGCTCTGCCGCCGCGGCCACCACGACCGCGCGGGCGCGCTGCTC CGCGCCATGTCCCTGGAGCCCCACCCGGCGTGCCGCCCCAACGCCGTCTCCTACACCGTC CTCATGCGCGCGCTCTGCGCCGACCGCCTCGCGGACCAGGCCGTCGGGCTGCTGCGGTCC ATGCGGTCCGCCGGCGTCCGCGCCGACGTGGTCACCTACGGCACCCTCATCCGTGGGCTG TGCGACGCCGCGGAAGTGGACAAGGCCGTGGAGCTGATGGGCGAGATGTGCGAAAGTGGC ATCGAGCCTAACGTGGTGGTGTACAGCTCTTTGCTCCAAGGGTATTGCAAGTCTGGGCGG TGGGAGGATGTAGGCAAGGTGTTCGTGGAAATGTCCGAGAAGGGAATAGAGCCGGATGTG GTGATGTACACTGGGTTGATCGATAGCCTTTGTAAAGTGGGGAAGGCAAAGAAGGCGCAC GGGGTGATGGACATGATGGTGAGGAGGGGGTTGGAGCCAAATGTGGTTACGTACAACGTG CTCATCAATTGCATGTGCAAGGAAGGTTCAGTGAAGGAGGCAATCGGTGTGCTGAAGAAG ATGTCCGAGAAGGGAGTGGCGCCGGATGTTGTGACATATAACACACTGATCAAGGGGCTC TCGGATGTGCTCGAGATGGATGAAGCAATGTGGTTGCTTGAGGAGATGGTTCGAGGTAAG AATATAGTTAAGCCTAATGTGGTGACATTCAACTCGGTTATACAGGGCCTTTGTGATATT GGTAGGATGAGGCAAGCGTTCCAAGTCCGTGCGATGATGGAAGAGACTGGGTGTATGGTT AACTTGGTGACATACAATCTGCTGATTGGTGGACTCCTTAGAGTCCACAAGGTAAGGAAG GCTATGGAGCTGATGGATGAGATGACTAGTCTAGGGCTGGAGCCTGATTCATTCACCTAT AGTATACTGATAAAGGGTTTCTGCAAAATGTGGCAAGTTGACCGTGCAGAAGATCTTTTA TCTACAATGAGAGATCGTGGGATAGAACCTGAGCTATTTCACTATATTCCTTTGCTTGTA GCCATGTGTGAACAGGGTATGATGGAACGAGCGAGGAATTTGTTCAATGAAATGGACAAC AACTTTCCACTAGATGTGGTTGCATATAGCACTATGATCCATGGTGCTTGCAAAGCAGGG GACTTGAAAACTGCAAAAGAGTTGCTTAAGAGCATAGTTGATGAGGGACTGACTCCTGAT GCTGTTACATATTCTATAGTAATCAATATGTTTGCTAAATCTGGAGACATGGAGGCGGCA AATGGTGTGCTTAAACAGATGACAGCAAGTGGCTTTTTGCCTGACGTTGCCGTATTTGAT TCACTGATCCAAGGTTATAGCACAAAAGGAGAGATAAACAAGGTTCTCGAGTTAATTCGG GAAATGATAACAAAGAATATAGCACTTGATTCAAAAATTATTTCCACTCTTTCCACTTCT CTGGTTGCAAGCAATGAAGGCAAAGCATTGTTGCAGAGCTTGCCTGATTTCAGTGCAGAA ATATCAAAAGGCAACATCAATTCACCCCAGGAGTTAATGAAAGTGTTGCATAATGTGTGC CCCCAAACAAATTAA