Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0620200-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:25636741:25639894:1 gene:Os07g0620200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heat shock protein DnaJ, N-terminal domain containing protein. (Os07t0620200-01)
Sequence	ATGGATTTCTCCGGCGGCGGCGGCCGCGGCGACCCGGCACGGTGGCTGGAGATCGCCGGG AAGCTGCTCGCGGCGCGGGACCTGGTCGGCTGCAAGCGCCTCGCGGAGCGCGCGGTGGAC GCGGAGCCCCTCCTCCCGGGCGCCGACGAGCTCCTCGCCGTGGCCGACGTCCTCCTCGCG TCCCAGCGCCTGCTCCCCTCCGGCCGCCCCGATCCCATCGCCGTGCTCCACCTCCAACCC AACCCCGACCCCGCCGAGGTCAAGCGCTCCTACCGCCGCCTCTCCAACCTCCTCTCCTCC AACCCTCGCCCCGGCGCTGACGCCGCCCTCCGCTGCGTGCAAGAAGCCTTCGCTCACCTC TCCGATTCCTCGGCTAATCCCGCTCCCGCTCTCGCTCCTCCTCCTGCTCCTGCTTCCGGC GGCGACGCCTCGGCCGCCGCGGCCGATGCGTTCTGGACGGCGTGTCCGTACTGCTGCCAT GTGTACCAGTACCAGCGTGCTCTGATGGGGCGCGCGCTAAGGTGCCCAGGCGCCGGCTGC AGGCGCGCGTTCGTGGCCACCGAGATCCCGGCCGCGCCGCCGATTGTGCCGGGCACTGAC ATGTACTACTGCGCTTGGGGGTTCTACCCGATGGGCTTCCCGAAGGCCGCTGATCTGAGC ACCAACTGGAAGCCATTTTGCCCCATGTATCCATGGAATTTGTCGTCTCCGCAGCAAGCG CCTGCCGATGCTGGTAATGTTAGCAAGCAAAATGTTGAGAGTAATGGTGGAAATGTTAAT ATTAATGTCAATACACCGCCGTCGAATGCACAGCCAGCGAATAAGAGCGGCGCCAGCAGC GGTGTTGGGGTCGGGCCATCTAGAGGTAGGATTAAGAAGACAACAGCCCGCAAGAAGGTT GGTGGTGGCTTCAAGAAGAATGCCTCTGGAGGCGTAGAAAGTGGCATTGAGCCATCGTTG CTTGGGCCGGATTCGTGGAATGGGGTTGCAGAGAGTGGATCGATGGTAGGTGCAAGAGGA ATTAACATAAATGAGGTGGCAAAGGGAACTGATGGCAGCAGCATGATGCATTTCGGTGGG GACGAGGAAATTGGTTTTGATTTGGATGTCGATGCAACGGATGCTATATTGGGGAATTTG CAGCATCTGCCATTCTTGAGGGATGATGACAATGCCAGACGGTTATTTTAG

Peptide Sequence

PEP ID	Os07t0620200-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:25636741:25639894:1 gene:Os07g0620200 transcript:Os07t0620200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heat shock protein DnaJ, N-terminal domain containing protein. (Os07t0620200-01)
Sequence	MDFSGGGGRGDPARWLEIAGKLLAARDLVGCKRLAERAVDAEPLLPGADELLAVADVLLA SQRLLPSGRPDPIAVLHLQPNPDPAEVKRSYRRLSNLLSSNPRPGADAALRCVQEAFAHL SDSSANPAPALAPPPAPASGGDASAAAADAFWTACPYCCHVYQYQRALMGRALRCPGAGC RRAFVATEIPAAPPIVPGTDMYYCAWGFYPMGFPKAADLSTNWKPFCPMYPWNLSSPQQA PADAGNVSKQNVESNGGNVNINVNTPPSNAQPANKSGASSGVGVGPSRGRIKKTTARKKV GGGFKKNASGGVESGIEPSLLGPDSWNGVAESGSMVGARGININEVAKGTDGSSMMHFGG DEEIGFDLDVDATDAILGNLQHLPFLRDDDNARRLF

Transcript Sequence

Transcript ID	Os07t0620200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:25636741:25639894:1 gene:Os07g0620200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heat shock protein DnaJ, N-terminal domain containing protein. (Os07t0620200-01)
Sequence	ATCTCCTCCCCTCACGCACCCAGACGACGACGAGATGGATTTCTCCGGCGGCGGCGGCCG CGGCGACCCGGCACGGTGGCTGGAGATCGCCGGGAAGCTGCTCGCGGCGCGGGACCTGGT CGGCTGCAAGCGCCTCGCGGAGCGCGCGGTGGACGCGGAGCCCCTCCTCCCGGGCGCCGA CGAGCTCCTCGCCGTGGCCGACGTCCTCCTCGCGTCCCAGCGCCTGCTCCCCTCCGGCCG CCCCGATCCCATCGCCGTGCTCCACCTCCAACCCAACCCCGACCCCGCCGAGGTCAAGCG CTCCTACCGCCGCCTCTCCAACCTCCTCTCCTCCAACCCTCGCCCCGGCGCTGACGCCGC CCTCCGCTGCGTGCAAGAAGCCTTCGCTCACCTCTCCGATTCCTCGGCTAATCCCGCTCC CGCTCTCGCTCCTCCTCCTGCTCCTGCTTCCGGCGGCGACGCCTCGGCCGCCGCGGCCGA TGCGTTCTGGACGGCGTGTCCGTACTGCTGCCATGTGTACCAGTACCAGCGTGCTCTGAT GGGGCGCGCGCTAAGGTGCCCAGGCGCCGGCTGCAGGCGCGCGTTCGTGGCCACCGAGAT CCCGGCCGCGCCGCCGATTGTGCCGGGCACTGACATGTACTACTGCGCTTGGGGGTTCTA CCCGATGGGCTTCCCGAAGGCCGCTGATCTGAGCACCAACTGGAAGCCATTTTGCCCCAT GTATCCATGGAATTTGTCGTCTCCGCAGCAAGCGCCTGCCGATGCTGGTAATGTTAGCAA GCAAAATGTTGAGAGTAATGGTGGAAATGTTAATATTAATGTCAATACACCGCCGTCGAA TGCACAGCCAGCGAATAAGAGCGGCGCCAGCAGCGGTGTTGGGGTCGGGCCATCTAGAGG TAGGATTAAGAAGACAACAGCCCGCAAGAAGGTTGGTGGTGGCTTCAAGAAGAATGCCTC TGGAGGCGTAGAAAGTGGCATTGAGCCATCGTTGCTTGGGCCGGATTCGTGGAATGGGGT TGCAGAGAGTGGATCGATGGTAGGTGCAAGAGGAATTAACATAAATGAGGTGGCAAAGGG AACTGATGGCAGCAGCATGATGCATTTCGGTGGGGACGAGGAAATTGGTTTTGATTTGGA TGTCGATGCAACGGATGCTATATTGGGGAATTTGCAGCATCTGCCATTCTTGAGGGATGA TGACAATGCCAGACGGTTATTTTAGTAGTTGCTGCGGTTGGTGTAGGTATTCCAAAGAAG TGGTGTATGCTAGCCTGGTTGAAGGAATTCCTGCATGGACCGATCCTCTGCTGTCGCTTT GCGTTTGTTGTCATCATGTCTCATGTTGCTCTTGTGTTCCTTGGAAATGTACCCTGTGTC TGTAGTTAGCTGGTGATCTCTTGTACCACCTGGCTGAGTAATCTTTAGTCTTTACTAGTT TGTAGACTGTAGATTATCCCCCAAATTAGTTGGGGGACGTGTAGTATTTATCAGCTGCAA ATTAATTGAAGGAGTTTACTGGCGAAGGAAATAATGCACTCTGCATGCCCACATGGATGA TCAGCAAGGCTTAACGAAGAGTTTATCATGCAACTGAGTCTCATGGAGCTCCGATGTCTG GGTCATCTCAAAATCGCTCTGTATTTTGTGACATCAGTTGATTCCTTGAGTACTTATATC AAAGCAGCTGAATAAGAGGATTCACATGGCCTGGTTTACAGGATATCGGTAGCTTGTAAT TTATACTTGTCTTCTTCGTTGTTACTTGTTAGCTAGGTTGTGGATGTCCTAAGTCCTAAC TGAAAATAAGTATGGGCCATATGCATGTGTGTGCATCCTGTTTCCGTCAATGAGCAATGA AGCAGAAAATACTTCTAGTGACTATTATGTTACTTCGCCATGTTAAATATCAGACTCCAG TAACTCTTCTGAATTTCTGGTTCTTTGTGCATTAGTTAGCTACTTTTACTGTCC