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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0619200-04
CDS Infomation

cds chromosome:IRGSP-1.0:7:25572038:25572696:1 gene:Os07g0619200 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os07t0619200-01);Hypothetical gene. (Os07t0619200-02);Similar to EF hand family protein. (Os07t0619200-04)
Sequence

ATGGCGATCAGGGGCATCCCGTCCTCTCGCGAGATGACCGTGGACGACTTCAAGAACTGG
CTGAAGCAGTTCGACACCGACAACGACGGCCGGATAAGCCGGGGCGAGCTCCGGGAGGCC
ATCCGCCGCCGCGGCGGCTGGTTCTCCGGCCTGAAAGCCGGCCGCGCCGTCCGCCACGCC
GACAGGGACAACAGCGGCTTCGTGGACGAGTCCGAGATCGAGAACCTCGTCGCCTTCGCC
CAGAAAACTCTGGGCATGAAGGTTACTGCCTGGTAG

Peptide Sequence

PEP ID

Os07t0619200-04
PEP Infomation

pep chromosome:IRGSP-1.0:7:25572038:25572696:1 gene:Os07g0619200 transcript:Os07t0619200-04 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os07t0619200-01);Hypothetical gene. (Os07t0619200-02);Similar to EF hand family protein. (Os07t0619200-04)
Sequence

MAIRGIPSSREMTVDDFKNWLKQFDTDNDGRISRGELREAIRRRGGWFSGLKAGRAVRHA
DRDNSGFVDESEIENLVAFAQKTLGMKVTAW

Transcript Sequence

Transcript ID

Os07t0619200-04
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:25572038:25572696:1 gene:Os07g0619200 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os07t0619200-01);Hypothetical gene. (Os07t0619200-02);Similar to EF hand family protein. (Os07t0619200-04)
Sequence

GCACTCCCTTCCTCCTAGCTCGAAGTGAGCAATCACTCTTGTGAAACTTTTGCAGACGCC
AGCCATGGCGATCAGGGGCATCCCGTCCTCTCGCGAGATGACCGTGGACGACTTCAAGAA
CTGGCTGAAGCAGTTCGACACCGACAACGACGGCCGGATAAGCCGGGGCGAGCTCCGGGA
GGCCATCCGCCGCCGCGGCGGCTGGTTCTCCGGCCTGAAAGCCGGCCGCGCCGTCCGCCA
CGCCGACAGGGACAACAGCGGCTTCGTGGACGAGTCCGAGATCGAGAACCTCGTCGCCTT
CGCCCAGAAAACTCTGGGCATGAAGGTTACTGCCTGGTAGAACTGAACACTACTGGCAGC
AATAAGCATTATTAAGCTAGTTTCATGGATTTTCATATGCTTGAGCTTAAAATGGGTAGA
GAGCACTGTGGCAGTAGTGCTAGCTTTTGATTAAGCTATAAAAATATTGCCTTCTATGTT
GCTTTTCTTTGCTGTGTGGTAGTAACTGGTAAAGTTTGACTTGCATGCCAGCTTCTCCTG
AATAATTTGTGTAAAAGCAGGAGAATGTCTGCCATGATGCTGTGATACTTTGAGTGATCC
TCTGTTGGTATTGACTCTGGTGAAGATGAAAATGAATTGGTGATTATGGCCATTTTAGT