Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0616000-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:25381698:25389532:1 gene:Os07g0616000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ERECT PANICLE 2 description:Aminoacyl-tRNA synthetase, class I, conserved site domain containing protein. (Os07t0616000-01);Hypothetical conserved gene. (Os07t0616000-02)
Sequence	ATGGAGCCCGACGCCCCGCTCGACTTCGCGCTCTTCCAGCTCTCCCCGCGCCGCTCGCGG TGCGAGCTGGTGGTGTCCGGGAATGGGCGGACGGAGAGGATCGCGTCCGGGTCGGTGAAG CCGTTCGTGGCGCACCTGCGCGCGGCGGAGGAGCAGGCGGCGGCGCAGCCGCCGCCGCCG GCCATCCGGCTGCAGCTGGACCGCCGCGCCGCGTGGTTCAGCAAGGGCACCCTCGAGAGG TTCGTGCGGTTCGTGAGCACGCCGGAGGTGCTGGAGATGGCTAACACCTTCGACGCGGAG ATGTCGCAGCTGGAAGGGGCTAGGAAGATTTATGCACAGGGAGTTGCCGGAGGCGCTGAT GGAGCTGAATCAGCAGCAGCTGCAGATATTACGAAGAAGGAACTTCTTAGAGCGATTGAT GTTCGTCTAAGTGCTCTTAAACAAGACCTTGTCACGGCTTGTGCCCGGGCATCATCTGCA GGGTTCAACCCTGACAGTGTTTCTGAGCTTGTTCTTTTTGCAGATCATTTTGGTGCCAAC CGGCTGAGTGAAGCATGCAACAAATTCATGTCACTTTGCCAGCGGCGTCCAGACATCTGT CCTCATTACTCGGTGTCATCAACTTCGTCACAATGGAAGAGCTTTGATGATGGAAATGTC CGTGGCTCCTCCAGTTCAGACATGTCACTAGACGAGACACAAGCTGATCAAGGTGCATCC AGCAACAAATCTATAATTGGTGGTAGTGTCTCTCATATTCACAGAAGCAACAGCCAAAAC TCAGTAGATGTTCCACCAGAACCCAGCGCAGTTCAACACCCTAAACCAACTATACAGCAG TCAGTAGAGAAACAAGAAAAGGAAACAGATGCTCTTCCTGCCCCTGCCCCAGCTGGAGGG GGTTCAAGACGGTTGAGTGTGCAAGACAGGATAAACATGTTTGAGAGTAAGCAGAAGGAA CAAACCTCAAGTTCTGGTAATAGTGCTGCATGTACTAGTAAGGTGGTTCCAACGAAAGGT GAGCACCGCAGGGTGCCTTCTGGTGCGTCCATGGACAAGTTGGTAAGGAGGTGGAGCAAT GTAAGTGATATGAGCATTGATCTAAGCAACAACGATAGCAGCAGCTTAAATGAAAAGAGG GAAATTGGAACCCCTGTTGGAACCCCAACATCTGCCAATTTGGAGGTTAATTCTAAGGCA AGAGCTGACGGGGACGCTAATGGGCTGAAGCATGCAGTTACATCATGCCAAAAAGATACA TCTGATGCCTTACCCTTGGATTCTACCACTGCAGATGCTTTCTCATCCTCAACTTTGAAT ACTACCTCACCATCCCCCTTATCAGCCATCGCTTCTTCTTCTCCTCAGAAACAGACCGCA CCTCGTGTGGAAGATGACATGGTTATAACCTCTAGCATTGAGAGTGAGTCATCCTTCAGA AAGGAGGTAGGGGCTAGTCAAGGAAAAGGTGACGTGAGGATGTCAGGGCAAGCTGTTTCA AGTGTTTCCACTCGAGCCCGAGTAAAAACATCTCCAAGGCCAACATGGCCAGAAAACAAT GTAACTTTAAGTAGCCCACCATTGTCACAGGAGCATGTACAGATGACCGATGAGGAAACT ATTCCCATTGTTCATGAAGTAGCAGTTAAAAAGGAACAGATTGTACAGAAAGATAATAGA GGTTCTCGTCTCCGTTCTAAAGAGATTCATGCTGAAGCAGATGTGGTTGGAAGGAAGGAC CGACCCTCTCGAACAACTGGAAAGATATCTGATACCAGAACAAGGGCCACCTCCAACCCA CGTGCTAATTTTAGGGGTTCATCTGTCAGGGATGAAGCTGCCTCTACAGAAGCTGAAGTT CATGATGTTAACTTGCAACGGAAAAGTCTAGCGCGGAAGGTAGAGGATTCTGGGAGAAAG GTTGCAGCTGGCTCTGAAATACTGCCTCAATCAGATTGTTCTATTCATCAGGGAACTAAT TTGAGCAGACAATCATCCAGTGCTGAACAGGAATTGAGTTTGCATGGAGGTAAAGTCAAA TTAATTAGTGATGGAAATGCTGTTCCTTTGGAGCAGACTAAGAGACCGACAAAAGGTAGT CAAGATCGGCATGATGAACTGCAAAAGAAAGCCAATGAATTGGAGAAGCTATTTGCTGCA CAGAAGCTAACCTCTTCTAGGAGAGGCAAGTCAACTGATGTGCAGGTTGAGAACACACCC AGGGTGAATGAGGTAAAGCCTCCACTGGTTCTTCCAGAGAGGATTTATACAAAGCAAATT GTAAAGGAGAGTATAACCAATGAGTTCGATGCCAATGAGCTTTTAAAGATGGTGGATACT GAAGGGTATAACAATAACGTACCACAAAGCATTATTAGCTTAGAAGAGTCAAGGGGAAAG TTCTATGATCAATATATGCAGAAGAGGGATGCAAAACTAAAGGAAGATTGGAAGCTGCAA GGAGAACAGAAGGAAGCAACAATAAAGGCAATGCGTGATAGCCTAGAACGAAGCAATGCT GAGATGCGGGCCAAATTCTCTCGGTCTTCAAGTGTTCCTGATTCAACATATATTTCTCGT TGCGCTCATAAGTTTCCTCCTTTGCAATCAGTTATAAAGGATAAGGATCAGGGGATAGAT TCCTTCTTGGTAGAAGAAGAAATGAATAGTGACTATCTATCTGGTGATGGTTCATCCAGG AGTGCTGATTCCAGGAAGCATTTTTCAAATAAAGTTGCCTGCAATCAAAAGAAGTCTATT GCTCCTGTTCATAGGCATTCATCAAGGACCGTAAGCTCTGGTTATGCAAACCGTAGGAAT CTACCAGATAATCCTCTTGCACAGTCTGTCCCCAATTTCGCGGACTTAAGAAAAGAAAAT ACAAAGCCCTCAGCTGGTCTGAGCAGAGCTGCTCCAAGGACCCAGCCAAAAAGTTTTATC CGTAGTAAGAGCATCATTGAAGAGAGTAAGAATATATCAAAAGATCAATCGAGGAAATCA CAGTCCATGAGGAAGAACTTAAGTCCTGGTGAATTAAGGGACGCTACATCCATGAATGAC GTCATATACAATTGGGCTCCCTCAAAAATTTCCAATGATCAAGTTGAGGGAGTTTTTGCT TATATCACCCATACAGCTGGTTCAACCAAGTCTTTTCTCAGGAAAGGCAATGAGGCTCAC CCTGCTGTCGGTATAGCTGGATTTGCTCCTCCTATGTTTGCAAATACCTACCAGAATGGA GATGATGACGATTTTCTAGATCAGGAAGAAGACTCCCCAGATGAGACCAAAGATGAAGAA TATGAAAGCATTGAAGAGAATCTTAGGGAGAGCGATTTTCCTGCTGACTCAGACAGTGAG AATCCAGGAATAAGTCATGAATTTGGAAATTCAGATGACCCAGGATCAGAAAATGGTGAT GTTTCTTTTCCAAGTGACGCACCCACTCTTGGTGGTTCCAAGTTCAATGCTTTTGCAGGA AACATGCATGATACACCTGGTGAAGTACCAGCATCATGGAGCACACGCCCACACCTATTC GCTTATGCAAATGATAACTCAGATGGTGATGCTTTTGCTGATTCACCAAATGGAAGTCCA TCACCATGGAATTCTCATACTTTAGATCAAATAACAGATGCTGATGTTTCCCGGATGAGG AAGAAGTGGGGCAGCGCTCAGATGCCTTTCGTTGGTCCCAATGCATCTCAACAGCCGCGG AAAGATGTTACAAAAGGATTTAAGAAGCTATTGAAATTTGGGAGGAAGACACGAGGTGCT GATGGTTTAAATGATTGGGTATCCGCTTCAACTGCCTCGGAATGTGACGATGATATGGAA GATGGACGAGATTTGGCCATGGGATCTTCTGATGATTTCAGGAAGTCAAGAATGGGTTAT CCTTCTGCATATGATGGTTTTGTTGATACCGATGTTTTTGCTGAACAAGACCAATCACTT CGCAGCTCCATTCCAAATCCCCCTGCAAATTTCAGATTGAGGGAGGATCAACTCACTGGA AGCTCACTTAAAGCACCGCGATCGTTCTTCTCCCTCTCAACGTTTCGTAGCAAGGGGGGT GATGCAAGGCTCAGGTGA

Peptide Sequence

PEP ID	Os07t0616000-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:25381698:25389532:1 gene:Os07g0616000 transcript:Os07t0616000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ERECT PANICLE 2 description:Aminoacyl-tRNA synthetase, class I, conserved site domain containing protein. (Os07t0616000-01);Hypothetical conserved gene. (Os07t0616000-02)
Sequence	MEPDAPLDFALFQLSPRRSRCELVVSGNGRTERIASGSVKPFVAHLRAAEEQAAAQPPPP AIRLQLDRRAAWFSKGTLERFVRFVSTPEVLEMANTFDAEMSQLEGARKIYAQGVAGGAD GAESAAAADITKKELLRAIDVRLSALKQDLVTACARASSAGFNPDSVSELVLFADHFGAN RLSEACNKFMSLCQRRPDICPHYSVSSTSSQWKSFDDGNVRGSSSSDMSLDETQADQGAS SNKSIIGGSVSHIHRSNSQNSVDVPPEPSAVQHPKPTIQQSVEKQEKETDALPAPAPAGG GSRRLSVQDRINMFESKQKEQTSSSGNSAACTSKVVPTKGEHRRVPSGASMDKLVRRWSN VSDMSIDLSNNDSSSLNEKREIGTPVGTPTSANLEVNSKARADGDANGLKHAVTSCQKDT SDALPLDSTTADAFSSSTLNTTSPSPLSAIASSSPQKQTAPRVEDDMVITSSIESESSFR KEVGASQGKGDVRMSGQAVSSVSTRARVKTSPRPTWPENNVTLSSPPLSQEHVQMTDEET IPIVHEVAVKKEQIVQKDNRGSRLRSKEIHAEADVVGRKDRPSRTTGKISDTRTRATSNP RANFRGSSVRDEAASTEAEVHDVNLQRKSLARKVEDSGRKVAAGSEILPQSDCSIHQGTN LSRQSSSAEQELSLHGGKVKLISDGNAVPLEQTKRPTKGSQDRHDELQKKANELEKLFAA QKLTSSRRGKSTDVQVENTPRVNEVKPPLVLPERIYTKQIVKESITNEFDANELLKMVDT EGYNNNVPQSIISLEESRGKFYDQYMQKRDAKLKEDWKLQGEQKEATIKAMRDSLERSNA EMRAKFSRSSSVPDSTYISRCAHKFPPLQSVIKDKDQGIDSFLVEEEMNSDYLSGDGSSR SADSRKHFSNKVACNQKKSIAPVHRHSSRTVSSGYANRRNLPDNPLAQSVPNFADLRKEN TKPSAGLSRAAPRTQPKSFIRSKSIIEESKNISKDQSRKSQSMRKNLSPGELRDATSMND VIYNWAPSKISNDQVEGVFAYITHTAGSTKSFLRKGNEAHPAVGIAGFAPPMFANTYQNG DDDDFLDQEEDSPDETKDEEYESIEENLRESDFPADSDSENPGISHEFGNSDDPGSENGD VSFPSDAPTLGGSKFNAFAGNMHDTPGEVPASWSTRPHLFAYANDNSDGDAFADSPNGSP SPWNSHTLDQITDADVSRMRKKWGSAQMPFVGPNASQQPRKDVTKGFKKLLKFGRKTRGA DGLNDWVSASTASECDDDMEDGRDLAMGSSDDFRKSRMGYPSAYDGFVDTDVFAEQDQSL RSSIPNPPANFRLREDQLTGSSLKAPRSFFSLSTFRSKGGDARLR

Transcript Sequence

Transcript ID	Os07t0616000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:25381698:25389532:1 gene:Os07g0616000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ERECT PANICLE 2 description:Aminoacyl-tRNA synthetase, class I, conserved site domain containing protein. (Os07t0616000-01);Hypothetical conserved gene. (Os07t0616000-02)
Sequence	AATTTTTCTCACTGTCACAGAGCACCACTGCAGCACCAACAAACCAAGCAGCTCATCTTC CAGTCTTCCACTCTTCCTCTCTCTCTAGCTCACTCTCTCTCTTTCTCTCTCCTCGCGCGA GCGCACGCTTACCGGAATCGGGGGGGCGAGCGGCGGCGAGATCCGGGCGGGCCGCGGCGA TCTCGTCGCCGCGGGAGCTGCATTGGCGCCGGCTCGCCGCCTTCCCGGCGTTTCTTGGGG CTGTCGCGAAGGAGGAGGAGGAGGAGGAGAGCTTGGGGTTCTTGGTGAGGGGATCCACCA GATCCGACCTCGCCGGCGGCGGCGGCCGCGATGGAGCCCGACGCCCCGCTCGACTTCGCG CTCTTCCAGCTCTCCCCGCGCCGCTCGCGGTGCGAGCTGGTGGTGTCCGGGAATGGGCGG ACGGAGAGGATCGCGTCCGGGTCGGTGAAGCCGTTCGTGGCGCACCTGCGCGCGGCGGAG GAGCAGGCGGCGGCGCAGCCGCCGCCGCCGGCCATCCGGCTGCAGCTGGACCGCCGCGCC GCGTGGTTCAGCAAGGGCACCCTCGAGAGGTTCGTGCGGTTCGTGAGCACGCCGGAGGTG CTGGAGATGGCTAACACCTTCGACGCGGAGATGTCGCAGCTGGAAGGGGCTAGGAAGATT TATGCACAGGGAGTTGCCGGAGGCGCTGATGGAGCTGAATCAGCAGCAGCTGCAGATATT ACGAAGAAGGAACTTCTTAGAGCGATTGATGTTCGTCTAAGTGCTCTTAAACAAGACCTT GTCACGGCTTGTGCCCGGGCATCATCTGCAGGGTTCAACCCTGACAGTGTTTCTGAGCTT GTTCTTTTTGCAGATCATTTTGGTGCCAACCGGCTGAGTGAAGCATGCAACAAATTCATG TCACTTTGCCAGCGGCGTCCAGACATCTGTCCTCATTACTCGGTGTCATCAACTTCGTCA CAATGGAAGAGCTTTGATGATGGAAATGTCCGTGGCTCCTCCAGTTCAGACATGTCACTA GACGAGACACAAGCTGATCAAGGTGCATCCAGCAACAAATCTATAATTGGTGGTAGTGTC TCTCATATTCACAGAAGCAACAGCCAAAACTCAGTAGATGTTCCACCAGAACCCAGCGCA GTTCAACACCCTAAACCAACTATACAGCAGTCAGTAGAGAAACAAGAAAAGGAAACAGAT GCTCTTCCTGCCCCTGCCCCAGCTGGAGGGGGTTCAAGACGGTTGAGTGTGCAAGACAGG ATAAACATGTTTGAGAGTAAGCAGAAGGAACAAACCTCAAGTTCTGGTAATAGTGCTGCA TGTACTAGTAAGGTGGTTCCAACGAAAGGTGAGCACCGCAGGGTGCCTTCTGGTGCGTCC ATGGACAAGTTGGTAAGGAGGTGGAGCAATGTAAGTGATATGAGCATTGATCTAAGCAAC AACGATAGCAGCAGCTTAAATGAAAAGAGGGAAATTGGAACCCCTGTTGGAACCCCAACA TCTGCCAATTTGGAGGTTAATTCTAAGGCAAGAGCTGACGGGGACGCTAATGGGCTGAAG CATGCAGTTACATCATGCCAAAAAGATACATCTGATGCCTTACCCTTGGATTCTACCACT GCAGATGCTTTCTCATCCTCAACTTTGAATACTACCTCACCATCCCCCTTATCAGCCATC GCTTCTTCTTCTCCTCAGAAACAGACCGCACCTCGTGTGGAAGATGACATGGTTATAACC TCTAGCATTGAGAGTGAGTCATCCTTCAGAAAGGAGGTAGGGGCTAGTCAAGGAAAAGGT GACGTGAGGATGTCAGGGCAAGCTGTTTCAAGTGTTTCCACTCGAGCCCGAGTAAAAACA TCTCCAAGGCCAACATGGCCAGAAAACAATGTAACTTTAAGTAGCCCACCATTGTCACAG GAGCATGTACAGATGACCGATGAGGAAACTATTCCCATTGTTCATGAAGTAGCAGTTAAA AAGGAACAGATTGTACAGAAAGATAATAGAGGTTCTCGTCTCCGTTCTAAAGAGATTCAT GCTGAAGCAGATGTGGTTGGAAGGAAGGACCGACCCTCTCGAACAACTGGAAAGATATCT GATACCAGAACAAGGGCCACCTCCAACCCACGTGCTAATTTTAGGGGTTCATCTGTCAGG GATGAAGCTGCCTCTACAGAAGCTGAAGTTCATGATGTTAACTTGCAACGGAAAAGTCTA GCGCGGAAGGTAGAGGATTCTGGGAGAAAGGTTGCAGCTGGCTCTGAAATACTGCCTCAA TCAGATTGTTCTATTCATCAGGGAACTAATTTGAGCAGACAATCATCCAGTGCTGAACAG GAATTGAGTTTGCATGGAGGTAAAGTCAAATTAATTAGTGATGGAAATGCTGTTCCTTTG GAGCAGACTAAGAGACCGACAAAAGGTAGTCAAGATCGGCATGATGAACTGCAAAAGAAA GCCAATGAATTGGAGAAGCTATTTGCTGCACAGAAGCTAACCTCTTCTAGGAGAGGCAAG TCAACTGATGTGCAGGTTGAGAACACACCCAGGGTGAATGAGGTAAAGCCTCCACTGGTT CTTCCAGAGAGGATTTATACAAAGCAAATTGTAAAGGAGAGTATAACCAATGAGTTCGAT GCCAATGAGCTTTTAAAGATGGTGGATACTGAAGGGTATAACAATAACGTACCACAAAGC ATTATTAGCTTAGAAGAGTCAAGGGGAAAGTTCTATGATCAATATATGCAGAAGAGGGAT GCAAAACTAAAGGAAGATTGGAAGCTGCAAGGAGAACAGAAGGAAGCAACAATAAAGGCA ATGCGTGATAGCCTAGAACGAAGCAATGCTGAGATGCGGGCCAAATTCTCTCGGTCTTCA AGTGTTCCTGATTCAACATATATTTCTCGTTGCGCTCATAAGTTTCCTCCTTTGCAATCA GTTATAAAGGATAAGGATCAGGGGATAGATTCCTTCTTGGTAGAAGAAGAAATGAATAGT GACTATCTATCTGGTGATGGTTCATCCAGGAGTGCTGATTCCAGGAAGCATTTTTCAAAT AAAGTTGCCTGCAATCAAAAGAAGTCTATTGCTCCTGTTCATAGGCATTCATCAAGGACC GTAAGCTCTGGTTATGCAAACCGTAGGAATCTACCAGATAATCCTCTTGCACAGTCTGTC CCCAATTTCGCGGACTTAAGAAAAGAAAATACAAAGCCCTCAGCTGGTCTGAGCAGAGCT GCTCCAAGGACCCAGCCAAAAAGTTTTATCCGTAGTAAGAGCATCATTGAAGAGAGTAAG AATATATCAAAAGATCAATCGAGGAAATCACAGTCCATGAGGAAGAACTTAAGTCCTGGT GAATTAAGGGACGCTACATCCATGAATGACGTCATATACAATTGGGCTCCCTCAAAAATT TCCAATGATCAAGTTGAGGGAGTTTTTGCTTATATCACCCATACAGCTGGTTCAACCAAG TCTTTTCTCAGGAAAGGCAATGAGGCTCACCCTGCTGTCGGTATAGCTGGATTTGCTCCT CCTATGTTTGCAAATACCTACCAGAATGGAGATGATGACGATTTTCTAGATCAGGAAGAA GACTCCCCAGATGAGACCAAAGATGAAGAATATGAAAGCATTGAAGAGAATCTTAGGGAG AGCGATTTTCCTGCTGACTCAGACAGTGAGAATCCAGGAATAAGTCATGAATTTGGAAAT TCAGATGACCCAGGATCAGAAAATGGTGATGTTTCTTTTCCAAGTGACGCACCCACTCTT GGTGGTTCCAAGTTCAATGCTTTTGCAGGAAACATGCATGATACACCTGGTGAAGTACCA GCATCATGGAGCACACGCCCACACCTATTCGCTTATGCAAATGATAACTCAGATGGTGAT GCTTTTGCTGATTCACCAAATGGAAGTCCATCACCATGGAATTCTCATACTTTAGATCAA ATAACAGATGCTGATGTTTCCCGGATGAGGAAGAAGTGGGGCAGCGCTCAGATGCCTTTC GTTGGTCCCAATGCATCTCAACAGCCGCGGAAAGATGTTACAAAAGGATTTAAGAAGCTA TTGAAATTTGGGAGGAAGACACGAGGTGCTGATGGTTTAAATGATTGGGTATCCGCTTCA ACTGCCTCGGAATGTGACGATGATATGGAAGATGGACGAGATTTGGCCATGGGATCTTCT GATGATTTCAGGAAGTCAAGAATGGGTTATCCTTCTGCATATGATGGTTTTGTTGATACC GATGTTTTTGCTGAACAAGACCAATCACTTCGCAGCTCCATTCCAAATCCCCCTGCAAAT TTCAGATTGAGGGAGGATCAACTCACTGGAAGCTCACTTAAAGCACCGCGATCGTTCTTC TCCCTCTCAACGTTTCGTAGCAAGGGGGGTGATGCAAGGCTCAGGTGACAATGTGACATA CCCTTAAGCACCAGAGCTGGAGTATATAAAATATCTCCCGAAATTAGGTACCGGTATCAA ATTTTCATGGATGGTACGCGGACACTGCTAGCTTGTCTTATAAATACAATATATTCTGTA TCTATAGTAATTCATATAAGCTGCCAGTTGAGCGTTTCCTCTGTTGTTTGATTATTCTTT TTCCTATCACTTGTGTAGAATTGGACCTCTAGATTTTTTTTTCTTTCTTTTGCGGTATTT GATTTCAATTGGCCCAGAGACACTGTATTCATTTTGTTGTTTTTGTGATATGCTTGTATC TTCCACCCCCATTTGTTCATTCACATATATCACAAATTCGCGGTATATGACAATCTTGCC AACATGAGCCTAGAAATTTCTGAAAGGCATCTTCC