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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0615500-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:25363573:25364560:-1 gene:Os07g0615500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:endosperm-specific gene 110 description:Protein of unknown function DUF581 family protein. (Os07t0615500-01)
Sequence

ATGGCCTCCGCCGTCGTAGCCAAGCCACCGGCCGCCGCTCCGGCGAGCCGCCGCCGATGC
TTCGTCTTCGTAGAGCGCGCCGCCGCCGCCGCCGTCGGCGTCAACGCGGCGATCGCTGCC
GTCGATGACCACCGCCCAGTTCCGGCCGCGGCCGCCGCCGCCATGGACGACGTCGTCGGC
CGCGTCGCGCGGCCTGCGCGCCCCAGCGCGCGCGCCATCATGGAGGGGACGCACAAGCAG
ATCAGCTCCGGCGGCGCCTCGGGCGGCTACTGCACCGTGCCGTGGTGCAGCATCTGCACC
GGGAATAACCCGTTCGCCATTGCCGAGTTCTTGCTGTGCTGCAACCTCTGCGGCGTCCCT
CTCGCCGGCCGCCCCAGCTTCATCTACATTGGAGAGAAGGCGTTCTGCAAGGAGGAGTGC
AGGTCGAGGTACGTGGTGGAGGAGGCGCTGCGCGAGGCGAGGGAGGAGAAGCGCCGCGCC
GCCGCCGCCGCCGCCGCGTCGCCGGAGAAGAAGAAGGAGGCGGCGGCGGCGAGGAAGGGC
GGGGAGGAGTGCAGGGAGGGGAGCATCTTCTTCATCTGCGCCGACGACCTGTGA

Peptide Sequence

PEP ID

Os07t0615500-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:25363573:25364560:-1 gene:Os07g0615500 transcript:Os07t0615500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:endosperm-specific gene 110 description:Protein of unknown function DUF581 family protein. (Os07t0615500-01)
Sequence

MASAVVAKPPAAAPASRRRCFVFVERAAAAAVGVNAAIAAVDDHRPVPAAAAAAMDDVVG
RVARPARPSARAIMEGTHKQISSGGASGGYCTVPWCSICTGNNPFAIAEFLLCCNLCGVP
LAGRPSFIYIGEKAFCKEECRSRYVVEEALREAREEKRRAAAAAAASPEKKKEAAAARKG
GEECREGSIFFICADDL

Transcript Sequence

Transcript ID

Os07t0615500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:25363573:25364560:-1 gene:Os07g0615500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:endosperm-specific gene 110 description:Protein of unknown function DUF581 family protein. (Os07t0615500-01)
Sequence

ACCATTTTCACTCACTCACTCACACTGAACTCCTATGGCCTCCGCCGTCGTAGCCAAGCC
ACCGGCCGCCGCTCCGGCGAGCCGCCGCCGATGCTTCGTCTTCGTAGAGCGCGCCGCCGC
CGCCGCCGTCGGCGTCAACGCGGCGATCGCTGCCGTCGATGACCACCGCCCAGTTCCGGC
CGCGGCCGCCGCCGCCATGGACGACGTCGTCGGCCGCGTCGCGCGGCCTGCGCGCCCCAG
CGCGCGCGCCATCATGGAGGGGACGCACAAGCAGATCAGCTCCGGCGGCGCCTCGGGCGG
CTACTGCACCGTGCCGTGGTGCAGCATCTGCACCGGGAATAACCCGTTCGCCATTGCCGA
GTTCTTGCTGTGCTGCAACCTCTGCGGCGTCCCTCTCGCCGGCCGCCCCAGCTTCATCTA
CATTGGAGAGAAGGCGTTCTGCAAGGAGGAGTGCAGGTCGAGGTACGTGGTGGAGGAGGC
GCTGCGCGAGGCGAGGGAGGAGAAGCGCCGCGCCGCCGCCGCCGCCGCCGCGTCGCCGGA
GAAGAAGAAGGAGGCGGCGGCGGCGAGGAAGGGCGGGGAGGAGTGCAGGGAGGGGAGCAT
CTTCTTCATCTGCGCCGACGACCTGTGAAGAATGTGATGGATATGATGCATCATGCGTGC
ATTGCATGGCGGATGATAATCGGAGCTTGGCTGTAATAATAATCGATCTCCACCATAATA
TAATACAATAGTAATATACTTAGTGTACTGTAATGAGGATGAATAAAGGGGATCAAATCA
AGGCCACCATGCATGGCTAGTCGATATATATCTGAGTATTTTGTGTTGCTC