Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0615200-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:25348060:25350242:1 gene:Os07g0615200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TIFY GENE 10B description:Tify domain containing protein. (Os07t0615200-01)
Sequence

ATGGCGGCTTCCGCGAGGCCCGTCGGCGTCGGCGGGGAGAGGGCGACGAGCTTCGCCATG
GCGTGCAGCCTGCTCAGCCGCTACGTCCGCCAGAACGGCGCCGCCGCCGCCGAGCTCGGC
CTCGGCATCAGAGGTGAGGGTGAGGCTCCGAGGGCGGCGCCGGCGACGATGAGCTTGCTG
CCCGGGGAGGCGGAGAGGAAGAAGGAGACCATGGAGCTCTTCCCGCAGAGCGCCGGCTTT
GGCCAGCAGGATGCCATCACCGCCGATTCTGCTGCTGATGCTAGGGAACAAGAGCCTGAG
AAGCGTCAGCTGACCATCTTCTATGGTGGGAAGGTGCTCGTGTTCAACGACTTCCCAGCC
GACAAGGCAAAGGGCTTGATGCAGCTGGCTAGCAAGGGCAGCCCGGTGGCTCCTCAGAAT
GCCGCGGCACCTGCACCAGCAGCTGTTACAGACAACACCAAGGCCCCTATGGCCGTGCCG
GCCCCGGTCAGTAGCTTGCCTACAGCTCAGGCCGATGCTCAGAAGCCTGCTCGCGCGAAT
GCTTCTGATATGCCTATTGCTAGGAAGGCATCACTCCACAGGTTCCTTGAGAAGAGAAAG
GATCGTCTTAATGCAAAGACGCCATACCAGGCTTCTCCTTCAGATGCAACCCCAGTCAAG
AAGGAGCCTGAGAGCCAGCCATGGCTCGGACTAGGGCCGAACGCCGTCGTGAAGCCCATA
GAACGCGGCCAATGA

Peptide Sequence

PEP ID

Os07t0615200-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:25348060:25350242:1 gene:Os07g0615200 transcript:Os07t0615200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TIFY GENE 10B description:Tify domain containing protein. (Os07t0615200-01)
Sequence

MAASARPVGVGGERATSFAMACSLLSRYVRQNGAAAAELGLGIRGEGEAPRAAPATMSLL
PGEAERKKETMELFPQSAGFGQQDAITADSAADAREQEPEKRQLTIFYGGKVLVFNDFPA
DKAKGLMQLASKGSPVAPQNAAAPAPAAVTDNTKAPMAVPAPVSSLPTAQADAQKPARAN
ASDMPIARKASLHRFLEKRKDRLNAKTPYQASPSDATPVKKEPESQPWLGLGPNAVVKPI
ERGQ

Transcript Sequence

Transcript ID

Os07t0615200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:25348060:25350242:1 gene:Os07g0615200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TIFY GENE 10B description:Tify domain containing protein. (Os07t0615200-01)
Sequence

TAGCTCTCGCTCTCGCAGCTCAACCACTAGCAGCAGCGGCAGGAAGGCGAGAGGAGGAAT
CGGAGGTAGCTGGACGGCGGCGAGGCGACGACGAGCCGGGGTGGTGCAGCAAGAACGGCG
CGGCGAGCGGCGGGGAGGAGAGATTGGATCGACGCCGGGTAGTTAGGAAGGGAGCTTGGA
GAGATGGCGGCTTCCGCGAGGCCCGTCGGCGTCGGCGGGGAGAGGGCGACGAGCTTCGCC
ATGGCGTGCAGCCTGCTCAGCCGCTACGTCCGCCAGAACGGCGCCGCCGCCGCCGAGCTC
GGCCTCGGCATCAGAGGTGAGGGTGAGGCTCCGAGGGCGGCGCCGGCGACGATGAGCTTG
CTGCCCGGGGAGGCGGAGAGGAAGAAGGAGACCATGGAGCTCTTCCCGCAGAGCGCCGGC
TTTGGCCAGCAGGATGCCATCACCGCCGATTCTGCTGCTGATGCTAGGGAACAAGAGCCT
GAGAAGCGTCAGCTGACCATCTTCTATGGTGGGAAGGTGCTCGTGTTCAACGACTTCCCA
GCCGACAAGGCAAAGGGCTTGATGCAGCTGGCTAGCAAGGGCAGCCCGGTGGCTCCTCAG
AATGCCGCGGCACCTGCACCAGCAGCTGTTACAGACAACACCAAGGCCCCTATGGCCGTG
CCGGCCCCGGTCAGTAGCTTGCCTACAGCTCAGGCCGATGCTCAGAAGCCTGCTCGCGCG
AATGCTTCTGATATGCCTATTGCTAGGAAGGCATCACTCCACAGGTTCCTTGAGAAGAGA
AAGGATCGTCTTAATGCAAAGACGCCATACCAGGCTTCTCCTTCAGATGCAACCCCAGTC
AAGAAGGAGCCTGAGAGCCAGCCATGGCTCGGACTAGGGCCGAACGCCGTCGTGAAGCCC
ATAGAACGCGGCCAATGAGGTTGCATGGAAACTTCACCAAAGCTCTTCAAAAATATATGA
AATGCGCTTGCCGTTAGAGTACCAAATCATATATGTTCTCTCATACCCCATGTTTTAGTG
TTTTTTCTTTAGTTCGTGCTTCTATGTTGTTCACTTGTCACATAGTTCTGAATGTAAAGG
AAAAAGGTAGTAGCATTGACGACCAGTGCCGAGAGCCTGAGAGAAGTTTTGGCATGTTAA
CACATGGTGACTCTGAAAATGGCCATGCTAAGGTAAAAAGTTATTGCAAAGGAAACATAT
ATGTATCTTCTGAAATTCTGATCATCTGGCTTTGTCCTTGGCTCTAGCCTTGCTCTATGC
AAAGCAAAGTGATTGTAATGGATTCAGAATATAATTCATATTCCTATTGTTGATTTCTGT
T