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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0614500-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:25313897:25316660:-1 gene:Os07g0614500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EUKARYOTIC ELONGATION FACTOR 1-BETA description:Similar to Elongation factor 1 beta 2. (Os07t0614500-01);Similar to elongation factor 1-delta 1. (Os07t0614500-03)
Sequence

ATGGCGGTTTCTTTCACCAACGTTAGCTCAGAGGCAGGCCTCAAAAAGCTCGATGAGTAC
CTTCTCACTCGCAGCTACATCTCTGGGTACCAAGCCTCCAACGATGACTTGGCTGTGTAC
TCTGCATTTTCAACTGCGCCCTCTTCAAGCTATACCAATGTTGCTAGGTGGTTTACTCAC
ATTGATGCACTCCTACGTCTGAGTGGAGTTACTGCTGATGGTCAAGGCGTAAAGGTCGAG
TCGACAGCTGTTCCTTCAGCTTCAACCCCTGATGTTGCTGATGCAAAGGCTCCTGCAGCT
GATGATGACGATGATGACGATGTTGACCTTTTTGGTGAGGAGACTGAAGAGGAGAAGAAG
GCAGCTGAGGAGCGTGCTGCTGCTGTCAAGGCTTCTGGCAAGAAGAAGGAATCTGGGAAG
TCCTCAGTGTTGCTTGATGTCAAACCATGGGACGATGAGACTGACATGACCAAATTGGAA
GAAGCTGTGAGGAATGTTAAGATGGAAGGCCTCCTTTGGGGCGCATCCAAGCTTGTCCCG
GTTGGTTACGGTATCAAGAAATTGCAAATCATGATGACCATTGTCGATGATCTTGTGTCG
GTTGATAGTCTGATTGAGGACTACTTCTACACCGAACCAGCGAATGAGTACATCCAGAGC
TGCGACATTGTTGCGTTCAACAAGATCTAG

Peptide Sequence

PEP ID

Os07t0614500-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:25313897:25316660:-1 gene:Os07g0614500 transcript:Os07t0614500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EUKARYOTIC ELONGATION FACTOR 1-BETA description:Similar to Elongation factor 1 beta 2. (Os07t0614500-01);Similar to elongation factor 1-delta 1. (Os07t0614500-03)
Sequence

MAVSFTNVSSEAGLKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTNVARWFTH
IDALLRLSGVTADGQGVKVESTAVPSASTPDVADAKAPAADDDDDDDVDLFGEETEEEKK
AAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVP
VGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEYIQSCDIVAFNKI

Transcript Sequence

Transcript ID

Os07t0614500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:25313897:25316660:-1 gene:Os07g0614500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EUKARYOTIC ELONGATION FACTOR 1-BETA description:Similar to Elongation factor 1 beta 2. (Os07t0614500-01);Similar to elongation factor 1-delta 1. (Os07t0614500-03)
Sequence

GCTCCTACACCGCGCCGTCGCCAGCAGCCGCCGCCGCTGCCTCTCCTCCTCCTCCCCTCG
CCGCCGATCCAATCCGGTCACTTTCAGTCTTTTTTCTTGAGGGGGAGATGGCGGTTTCTT
TCACCAACGTTAGCTCAGAGGCAGGCCTCAAAAAGCTCGATGAGTACCTTCTCACTCGCA
GCTACATCTCTGGGTACCAAGCCTCCAACGATGACTTGGCTGTGTACTCTGCATTTTCAA
CTGCGCCCTCTTCAAGCTATACCAATGTTGCTAGGTGGTTTACTCACATTGATGCACTCC
TACGTCTGAGTGGAGTTACTGCTGATGGTCAAGGCGTAAAGGTCGAGTCGACAGCTGTTC
CTTCAGCTTCAACCCCTGATGTTGCTGATGCAAAGGCTCCTGCAGCTGATGATGACGATG
ATGACGATGTTGACCTTTTTGGTGAGGAGACTGAAGAGGAGAAGAAGGCAGCTGAGGAGC
GTGCTGCTGCTGTCAAGGCTTCTGGCAAGAAGAAGGAATCTGGGAAGTCCTCAGTGTTGC
TTGATGTCAAACCATGGGACGATGAGACTGACATGACCAAATTGGAAGAAGCTGTGAGGA
ATGTTAAGATGGAAGGCCTCCTTTGGGGCGCATCCAAGCTTGTCCCGGTTGGTTACGGTA
TCAAGAAATTGCAAATCATGATGACCATTGTCGATGATCTTGTGTCGGTTGATAGTCTGA
TTGAGGACTACTTCTACACCGAACCAGCGAATGAGTACATCCAGAGCTGCGACATTGTTG
CGTTCAACAAGATCTAGATCTTCCTTGAGTCAGGTGATGGCGATCGGTGCACAAAGATAA
AAAGAAAAATCCGGAAGTTTGAATTACCGTTGATACTTCAATCTAGAAGTTTGAATTACC
ATTGATGTGTCGTTCGTGGTGTCAACTAGTACTTGAGCCCGTTTTGTGTTGAGATTGTAG
CACTCTACTTCTACTGAGATCGTTTTCTCCTCCTTTAATGTTTAAAGACCAATCAGGTTA
TTATT