Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0614100-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:25289257:25293741:-1 gene:Os07g0614100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:20S proteasome alpha2 subunit description:Alpha 1-2 subunit of 20S proteasome. (Os07t0614100-01)
Sequence	ATGCCGGAAGCCGAGGCCGCGGCGGTGGTCACCGGAGGCGGCAGCCGCGCCGCCGGCCCC GCCGACTACGAGCGCTTCATCACCCTCTTCTCCCCGGAGGGCCGCCTCTGCCAACTCGAC TACGCGTTCAACGCCGTGAAGCTGGCCGGGATCACCTCCGTCGGCGTGCGCGGCGACGAC TCCGTCTACGTCCTCACCCATCGGAAGGAGGACAAGTTGCACGACCCGACGACCATCACG AACCTGTTCGCGATCACCGACCGGATTGGGCTGCTCGCCACCGGGATGCCAGGTGATGGA AGGGCAATAGCTCAGGAGGCAAGGAACGCAGCTGCCGAGTTTCGCTTCAAGTGGGGATAT AAAATGTCTCCTTGTATGTTAGCTCAATGGATTGCAGACAGAGCACAGATCCGCACCCAG CATGCTCAGATAAGACCTTATGGAGTTGTTTCTATGATCTTTGGAATTGATGAAGAGAAA GGAACCCCCGAGCTCTTCACATGTGATCCAGCTGGACAATTCTTTGCACACAAGGCCACA AGTGCTGGTCCGAAAGAGAAGGAAGTTATGAACTTTCTTGAGGAAAGAATGAAGAGCAAA CCTTCTCTATCATCTGGCACAACAAAAGGGTTGGCAAAATCTGCGTTGAAACATGTCCTG GAGGGGGATTTCTATGCCCGAGAATTTGAGCTTGGATTTATCAAGAAAGGGGATCCAACT GTAACTCTGCACCCAGTGAAATTCAAGCGCACGCGGAGGTGA

Peptide Sequence

PEP ID	Os07t0614100-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:25289257:25293741:-1 gene:Os07g0614100 transcript:Os07t0614100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:20S proteasome alpha2 subunit description:Alpha 1-2 subunit of 20S proteasome. (Os07t0614100-01)
Sequence	MPEAEAAAVVTGGGSRAAGPADYERFITLFSPEGRLCQLDYAFNAVKLAGITSVGVRGDD SVYVLTHRKEDKLHDPTTITNLFAITDRIGLLATGMPGDGRAIAQEARNAAAEFRFKWGY KMSPCMLAQWIADRAQIRTQHAQIRPYGVVSMIFGIDEEKGTPELFTCDPAGQFFAHKAT SAGPKEKEVMNFLEERMKSKPSLSSGTTKGLAKSALKHVLEGDFYAREFELGFIKKGDPT VTLHPVKFKRTRR

Transcript Sequence

Transcript ID	Os07t0614100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:25289257:25293741:-1 gene:Os07g0614100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:20S proteasome alpha2 subunit description:Alpha 1-2 subunit of 20S proteasome. (Os07t0614100-01)
Sequence	ACCACGCCACCATTCCCACGCCTCACGCGGCGGAGAGAGAGAGAGAGGGTGAATTTGCTA GCGAGATGCCGGAAGCCGAGGCCGCGGCGGTGGTCACCGGAGGCGGCAGCCGCGCCGCCG GCCCCGCCGACTACGAGCGCTTCATCACCCTCTTCTCCCCGGAGGGCCGCCTCTGCCAAC TCGACTACGCGTTCAACGCCGTGAAGCTGGCCGGGATCACCTCCGTCGGCGTGCGCGGCG ACGACTCCGTCTACGTCCTCACCCATCGGAAGGAGGACAAGTTGCACGACCCGACGACCA TCACGAACCTGTTCGCGATCACCGACCGGATTGGGCTGCTCGCCACCGGGATGCCAGGTG ATGGAAGGGCAATAGCTCAGGAGGCAAGGAACGCAGCTGCCGAGTTTCGCTTCAAGTGGG GATATAAAATGTCTCCTTGTATGTTAGCTCAATGGATTGCAGACAGAGCACAGATCCGCA CCCAGCATGCTCAGATAAGACCTTATGGAGTTGTTTCTATGATCTTTGGAATTGATGAAG AGAAAGGAACCCCCGAGCTCTTCACATGTGATCCAGCTGGACAATTCTTTGCACACAAGG CCACAAGTGCTGGTCCGAAAGAGAAGGAAGTTATGAACTTTCTTGAGGAAAGAATGAAGA GCAAACCTTCTCTATCATCTGGCACAACAAAAGGGTTGGCAAAATCTGCGTTGAAACATG TCCTGGAGGGGGATTTCTATGCCCGAGAATTTGAGCTTGGATTTATCAAGAAAGGGGATC CAACTGTAACTCTGCACCCAGTGAAATTCAAGCGCACGCGGAGGTGAAGGACGAGAGCAG AACAAAGTGCTCGATATAGGACGATCACCAGTCTTTCAAATCTTTTACAGCATGGAAGTT ATGCAAAACCATTACCGCTAACTGATTACTGTACGCTATAGCTATATGTATGACTGCGCT CAAGCTGTGTCAAGTGTCAATTATGAGTTGCCCCCGGATTTACGATACCAACTGATGATC ACACATCAACACTTCAAACTGTAACTGTCTACGAAGGAACTGCATCCTCCTGCTCCCGTG TAACCTTAGCCAGGGATAATTTTCCTATGAAGTTGGTCGCAAGGCTGCCGAGGAAGAGAT CTCCGTTGAACTCTGTCACCGAAGTGACCATGTTGATCACATTCCCTTCAGAGTCACCAA GAACCCTCACGATCTCGCCGTTCAACGACACCTGAGCCACCACTGCTCCCTTGAGCGTCG CCTTGGTCCTCTCGACGAGCGCCGGGAACGACGCGATGACCCTCCTCGTCAAGCTCCAGC GAGAGATCAGGTCCAGCCATGGAGACCTCACCTGCAGTTTGAGCACAGAAAATTGTAAGT TTGAGCACTGAAAATGTTGTGTAGATGCTTATGGCAGCAGAAAGGTTAGAGAGCAGAGAC CTGGAGAAGGGCAATCCAGAAGTGACCATCTGAACCCAGCCGAATGTTGTCTGGATTCCC CGGCAGGTTGTCCACGAAGATCTCTGCCTCCCCAGCCTTCTCCCCTTTCAGCCACACTCT CAAGCATCTGAACCTGCACTTGACAATATCACTTCATGGTCACTTGACG