Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0614000-02
CDS Infomation	cds chromosome:IRGSP-1.0:7:25287602:25290131:1 gene:Os07g0614000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Six-bladed beta-propeller, TolB-like domain containing protein. (Os07t0614000-01);Six-bladed beta-propeller, TolB-like domain containing protein. (Os07t0614000-02)
Sequence	ATGGCGCAGCAGCTGGGCCTCCTCGCCGCCGTCTTCGTGTCGCTCGCCGTGCACGTCGCG CTCCACTGCCCCATCCAGCCGCTCGCCCCGCCGCCCGCACGCCCACCCGCCGCCGCTCGC TTCCCTCCCAACAACCTCCTCCAGAATCTGGAGAAGCTTGGGGAAGGGATGCTGAGCGCG CCGGAGGACGTGTACGTGGACGACGCCGGCGGCGAGGTGTTCACGGCGACGAGGGACGGG TGGGTGCGGAGGATGCAGGCGAACGGGTCGTGGGAGCGGTGGGGGCTCGTCGGCGGCACG GGGCTCCTCGGCGTCGCCCCGTCCGCCGACGGCGCCATGCTCGTCTGCGACGCCGACAAG GGATTGTTGAAAGTGGATGAGAATGGACGCGTGACGCTTCTTGCTTCGACTGTCGAAGGC TCCACGATCAGGTTCGCGGACGCGGCGATCGAGGCCTCCGATGGCACGGTGTACTTCAGC GACGCCAGCACCAGGTTCAGCTTCGACAACTGGTTCCTCGACTTCTTCGAGTACCGCTTC ACCGGCCGCCTGCTCAAGTACGACCCCCGCACCGGCGAGGCCTCCGTCGTGCTCGACGGC CTCGGCTTCGCCAACGGCGTCGCCCTGCCGCCCGACGAGGCCTTCGTCGTCGTCTGCGAG ACGATGAGGTTCAGATGCTTGAGAGTGTGGCTGAAAGGGGAGAAGGCTGGGGAGGCAGAG ATCTTCGTGGACAACCTGCCGGGGAATCCAGACAACATTCGGCTGGGTTCAGATGGTCAC TTCTGGATTGCCCTTCTCCAGGTGAGGTCTCCATGGCTGGACCTGATCTCTCGCTGGAGC TTGACGAGGAGGGTCATCGCGTCGTTCCCGGCGCTCGTCGAGAGGACCAAGGCGACGCTC AAGGGAGCAGTGGTGGCTCAGGTGTCGTTGAACGGCGAGATCGTGAGGGTTCTTGGTGAC TCTGAAGGGAATGTGATCAACATGGTCACTTCGGTGACAGAGTTCAACGGAGATCTCTTC CTCGGCAGCCTTGCGACCAACTTCATAGGAAAATTATCCCTGGCTAAGGTTACACGGGAG CAGGAGGATGCAGTTCCTTCGTAG

Peptide Sequence

PEP ID	Os07t0614000-02
PEP Infomation	pep chromosome:IRGSP-1.0:7:25287602:25290131:1 gene:Os07g0614000 transcript:Os07t0614000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Six-bladed beta-propeller, TolB-like domain containing protein. (Os07t0614000-01);Six-bladed beta-propeller, TolB-like domain containing protein. (Os07t0614000-02)
Sequence	MAQQLGLLAAVFVSLAVHVALHCPIQPLAPPPARPPAAARFPPNNLLQNLEKLGEGMLSA PEDVYVDDAGGEVFTATRDGWVRRMQANGSWERWGLVGGTGLLGVAPSADGAMLVCDADK GLLKVDENGRVTLLASTVEGSTIRFADAAIEASDGTVYFSDASTRFSFDNWFLDFFEYRF TGRLLKYDPRTGEASVVLDGLGFANGVALPPDEAFVVVCETMRFRCLRVWLKGEKAGEAE IFVDNLPGNPDNIRLGSDGHFWIALLQVRSPWLDLISRWSLTRRVIASFPALVERTKATL KGAVVAQVSLNGEIVRVLGDSEGNVINMVTSVTEFNGDLFLGSLATNFIGKLSLAKVTRE QEDAVPS

Transcript Sequence

Transcript ID	Os07t0614000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:25287602:25290131:1 gene:Os07g0614000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Six-bladed beta-propeller, TolB-like domain containing protein. (Os07t0614000-01);Six-bladed beta-propeller, TolB-like domain containing protein. (Os07t0614000-02)
Sequence	CGATCGATCGAGCTCGTCGTCGGCTACACATTGGTGGGTCGATCGGCGGCATGGCGCAGC AGCTGGGCCTCCTCGCCGCCGTCTTCGTGTCGCTCGCCGTGCACGTCGCGCTCCACTGCC CCATCCAGCCGCTCGCCCCGCCGCCCGCACGCCCACCCGCCGCCGCTCGCTTCCCTCCCA ACAACCTCCTCCAGAATCTGGAGAAGCTTGGGGAAGGGATGCTGAGCGCGCCGGAGGACG TGTACGTGGACGACGCCGGCGGCGAGGTGTTCACGGCGACGAGGGACGGGTGGGTGCGGA GGATGCAGGCGAACGGGTCGTGGGAGCGGTGGGGGCTCGTCGGCGGCACGGGGCTCCTCG GCGTCGCCCCGTCCGCCGACGGCGCCATGCTCGTCTGCGACGCCGACAAGGGATTGTTGA AAGTGGATGAGAATGGACGCGTGACGCTTCTTGCTTCGACTGTCGAAGGCTCCACGATCA GGTTCGCGGACGCGGCGATCGAGGCCTCCGATGGCACGGTGTACTTCAGCGACGCCAGCA CCAGGTTCAGCTTCGACAACTGGTTCCTCGACTTCTTCGAGTACCGCTTCACCGGCCGCC TGCTCAAGTACGACCCCCGCACCGGCGAGGCCTCCGTCGTGCTCGACGGCCTCGGCTTCG CCAACGGCGTCGCCCTGCCGCCCGACGAGGCCTTCGTCGTCGTCTGCGAGACGATGAGGT TCAGATGCTTGAGAGTGTGGCTGAAAGGGGAGAAGGCTGGGGAGGCAGAGATCTTCGTGG ACAACCTGCCGGGGAATCCAGACAACATTCGGCTGGGTTCAGATGGTCACTTCTGGATTG CCCTTCTCCAGGTGAGGTCTCCATGGCTGGACCTGATCTCTCGCTGGAGCTTGACGAGGA GGGTCATCGCGTCGTTCCCGGCGCTCGTCGAGAGGACCAAGGCGACGCTCAAGGGAGCAG TGGTGGCTCAGGTGTCGTTGAACGGCGAGATCGTGAGGGTTCTTGGTGACTCTGAAGGGA ATGTGATCAACATGGTCACTTCGGTGACAGAGTTCAACGGAGATCTCTTCCTCGGCAGCC TTGCGACCAACTTCATAGGAAAATTATCCCTGGCTAAGGTTACACGGGAGCAGGAGGATG CAGTTCCTTCGTAGACAGTTACAGTTTGAAGTGTTGATGTGTGATCATCAGTTGGTATCG TAAATCCGGGGGCAACTCATAATTGACACTTGACACAGCTTGAGCGCAGTCATACATATA GCTATAGCGTACAGTAATCAGTTAGCGGTAATGGTTTTGCATAACTTCCATGCTGTAAAA GATTTGAAAGACTGGTGATCGTCCTATATCGAGCACTTTGTTCTGCTCTCGTCCTTCACC TCCGCGTGCGCTTGAATTTCACTGGGTGCAGAGTTACAGTTGGATCCCCTTTCTTGATAA ATCCAAGCTGACAAGAAAGTTTGACTTG