Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0613300-02
CDS Infomation

cds chromosome:IRGSP-1.0:7:25239858:25247922:1 gene:Os07g0613300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PAUSED. (Os07t0613300-01);Similar to PAUSED. (Os07t0613300-02);Similar to predicted protein. (Os07t0613300-03)
Sequence

ATGGACGACCTCGAGCAGGCCATCCTGCTCGCCTCGGATTCCCCCGCCGCGGCCGCCGCC
TCCCCGGCCGTGCGCGCCGAGGCGCTCGCCTACTGCGCGCGCGCCCGCGACGAGACCCCG
CCGTCGTCGCTCCTCCACCTCTGCCTCTACGGCCTCGCCTCCTCCCCGCACGCCCACGTC
CACTTCTGGTGCCTCCAGACCATCCACGACGCGCTCCTCCTCCGCCGCCGCCTCGCCCTC
CCCGACGACCTCGCCCTCCTCCGCTCCTCGCTGCTCTCCCTCGCCGTCTCCTCCAACGCC
GCCTCCCCTCCCTTCCTCCGCAACAAGCTCGCCCAGCTCCTCGCCCTCCTCGTCCGCTTC
GAGTACCCCCATGTCTACCCTTCCTACTTCCTCGATCTCATCCCGCCCTCGCCGCCGCTG
CCGGGACCCACCGACATGTTCGCCCGCGTCCTCGTCTCCCTCGACGATGACCTGCTCTCC
CAGGACTACCCGCGCAACGCCGAGGAGGCCTCCGATGCCGGGAGGGTCAAGGACGCCATG
CGCGCGCAGTGCGTGCCCCAGATCGCCCGCCACTGGCACGAGGCCGCCGTGTCCCTCCGC
GCCGCCGACCCCGCCGTCGCCGCAGTAGCCCTCGATGCGGCGCGGAGGTGCATCTCCTGG
ATCGATGTCTCCCTGGTCGCGAATGACGTGTTTGTTCCCTTGCTCTTTGACATTGCGCTG
TCCCCGGGGAGCGTGGCTCCTCTTGCTGCCGCGGCGGTGGGGTGCCTCTCTGCTGTGGCA
GCAAAGAGGATGGACGCGAGGGCAAAGGTGGCGTTGCTGAGGTCGCTCATGTCTGCCCAG
AAGGGGTTTGGTAGCCCTGACAGCGGTTTGAAAATGGCACATTTGGTGACGGCATACGCT
GTCGAGGCTCTCGAGTGTTATCGCAAGCTTGGCTCTAGTGATGCTGATGGAGCCGCGGCA
TTGGAAATGCTGGAAGAGGTGCTGCCAGCTGTATTTGCGGCCGCAGAGAGCGGCGATGAT
GATGAGGTTGATTCGGGCTCGGTGCTTGAGTTTTTATCTGGGTATGTGAGTACGATGAAG
GCACCGACAGAGAAGCAACTTGGACACTTGGGACAGATACTGGAGGTGGTGCGGATGCAG
ATGTCATATGATCCAGTTTATAGGGGTCATCTTGATGTCCTTGACAAGATAGGGAAGGAG
GAGGAAGACCTGATGGCAGAGCAGCGGAAGGATTTAATTGCACTATTTCGGAGCATTTGT
CGTGTGGCACCAGGTGCCACTCAGCTGTTCATAAGAGGGTTGCTTGTGACGGCCCTTTCA
TCTGCAGAAGTTAGTGTTGAGGATGTTGAGGTCGCGCTTACTCTGTTTTACCGGCTTGGG
GAAATAGTGGGTGAGGAAGAGATCCGGACTGGAGCTGGGTTAATTAGGGAGCTTGTCCCA
ATGCTCCTTTCAGCGAGATTCTCATGCCACACACACCGCCTAGTTGCATTAGTGTACCTA
GACACAATTAGCCGCTATATCAAGTTCATGCAGGAGAATGACCAATATGTGCCACATCTG
CTTACTGTGTTCTTGGATGAGCGTGGCATACACCATCAGAATGCCCACGTGAGCTGCCAT
GCAGGATACTTGCTCATGAGAGCTATCAGGCTGTTGAAGGCTAAGCTAGTGCCTTACTTG
GATACCATTTTGCAGAGCTTGCAAGATGCCCTAGTGCAATTCACTGCTACGGACTGGGCA
AACAAAGATATTAAGTTCTCCAGCTCAGAGGATGGCAGCCAAATATTCGAGGCTGTGGGA
CTGTTGATCGGCATTGAAGAGGTGTCACCAGATAAGCAGGTTCAGTGCTTGACAGCTTTA
CTTAATCCTCTCTGTCAACAGATCGAGTCACTTGTTATGGATGCCAAAGCACAAGGACTT
GAAGAATCATCTCCAAGAGCTATAGGTCTTCAACAGATTATTGTTGCATTGACTATGATC
AGCAAGGGATTTAATGAACGGCTTGTGATGGGAAGCAGGCCGACACTTGGCGTTATGTTC
AAGAAGACCCTTGATGTAGTTTTGCAAGTCCTCATCTCATTTCCTAATGTGAAGCCCCTG
CGATCTAAGATCATATCATTTCTCCACCGTATGGTTGAGATATTAGGCATTTCGGTGCTT
CCATGTATTCCAATTGCACTGCGACAGTTGCTCGTTGATAATGAGGCAAAAGATATGTCG
GAATTTCTGTACTTAATAAACCAAATAATATGCAAGTTTAAATCTTCAGCAAATGCCTTA
TTGGAGGATGTGTTTCCTGCCATCGCAAGTCATTTATCTGTGATACTATCACACGATGCC
TTTTCAAATGGTTTTGCAAGCAATACTGAGGAAATGCGTGAGCTGCAAGAGCTGGAAAAG
AGATTTTACGCATTCTTGCTTCATATAGCAACACATGATCTGTCTACAGTTCTCCTAACT
CCTAGTTGTAGGCATTATCTAGAGAACATAATGCAGTTGCTTTTGATTACTTCATGCAGC
CATAAAGAGATATCACATCGGAAGACATGCGTACAGACTTTTGTCAACCTTATCAAAGAC
TGGTGTAGTAGCTCTGAAATTGAAGATAAGCTTCCTGGCTTCCGAGTGTTTATGATTGAG
AAGTTCGCTACTGGTTGCTGTTTGCAGAGTGTCCTTGACAAGTCATTTAACTTCCGTGAT
GGAATTTCGATTGCCCTGTTTGGTGAAATCATGATGGCTCAAAAGGTTATGTATGAAAGA
TTTGGCGAGAACTTTGTTGTAAATTTTGTAACAAAACTTCGAGAAGCACACTGCCCACCA
GACCTTGCTGAACAGTACTACCAAAAGTTACAGGGAAATGATATCAAGGCATTCAAGTCA
TTTTATGAATCACTTGTCATGAAAATAAGACAACAGCAGAATGGGAGTCTTGTCTTCAGA
TAG

Peptide Sequence

PEP ID

Os07t0613300-02
PEP Infomation

pep chromosome:IRGSP-1.0:7:25239858:25247922:1 gene:Os07g0613300 transcript:Os07t0613300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PAUSED. (Os07t0613300-01);Similar to PAUSED. (Os07t0613300-02);Similar to predicted protein. (Os07t0613300-03)
Sequence

MDDLEQAILLASDSPAAAAASPAVRAEALAYCARARDETPPSSLLHLCLYGLASSPHAHV
HFWCLQTIHDALLLRRRLALPDDLALLRSSLLSLAVSSNAASPPFLRNKLAQLLALLVRF
EYPHVYPSYFLDLIPPSPPLPGPTDMFARVLVSLDDDLLSQDYPRNAEEASDAGRVKDAM
RAQCVPQIARHWHEAAVSLRAADPAVAAVALDAARRCISWIDVSLVANDVFVPLLFDIAL
SPGSVAPLAAAAVGCLSAVAAKRMDARAKVALLRSLMSAQKGFGSPDSGLKMAHLVTAYA
VEALECYRKLGSSDADGAAALEMLEEVLPAVFAAAESGDDDEVDSGSVLEFLSGYVSTMK
APTEKQLGHLGQILEVVRMQMSYDPVYRGHLDVLDKIGKEEEDLMAEQRKDLIALFRSIC
RVAPGATQLFIRGLLVTALSSAEVSVEDVEVALTLFYRLGEIVGEEEIRTGAGLIRELVP
MLLSARFSCHTHRLVALVYLDTISRYIKFMQENDQYVPHLLTVFLDERGIHHQNAHVSCH
AGYLLMRAIRLLKAKLVPYLDTILQSLQDALVQFTATDWANKDIKFSSSEDGSQIFEAVG
LLIGIEEVSPDKQVQCLTALLNPLCQQIESLVMDAKAQGLEESSPRAIGLQQIIVALTMI
SKGFNERLVMGSRPTLGVMFKKTLDVVLQVLISFPNVKPLRSKIISFLHRMVEILGISVL
PCIPIALRQLLVDNEAKDMSEFLYLINQIICKFKSSANALLEDVFPAIASHLSVILSHDA
FSNGFASNTEEMRELQELEKRFYAFLLHIATHDLSTVLLTPSCRHYLENIMQLLLITSCS
HKEISHRKTCVQTFVNLIKDWCSSSEIEDKLPGFRVFMIEKFATGCCLQSVLDKSFNFRD
GISIALFGEIMMAQKVMYERFGENFVVNFVTKLREAHCPPDLAEQYYQKLQGNDIKAFKS
FYESLVMKIRQQQNGSLVFR

Transcript Sequence

Transcript ID

Os07t0613300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:25239858:25247922:1 gene:Os07g0613300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PAUSED. (Os07t0613300-01);Similar to PAUSED. (Os07t0613300-02);Similar to predicted protein. (Os07t0613300-03)
Sequence

CTTCCTTTCCCCCCTCCGCCCCGCCCCAGATTCCTCCGCCACCACCGCCACCGCCATGGA
CGACCTCGAGCAGGCCATCCTGCTCGCCTCGGATTCCCCCGCCGCGGCCGCCGCCTCCCC
GGCCGTGCGCGCCGAGGCGCTCGCCTACTGCGCGCGCGCCCGCGACGAGACCCCGCCGTC
GTCGCTCCTCCACCTCTGCCTCTACGGCCTCGCCTCCTCCCCGCACGCCCACGTCCACTT
CTGGTGCCTCCAGACCATCCACGACGCGCTCCTCCTCCGCCGCCGCCTCGCCCTCCCCGA
CGACCTCGCCCTCCTCCGCTCCTCGCTGCTCTCCCTCGCCGTCTCCTCCAACGCCGCCTC
CCCTCCCTTCCTCCGCAACAAGCTCGCCCAGCTCCTCGCCCTCCTCGTCCGCTTCGAGTA
CCCCCATGTCTACCCTTCCTACTTCCTCGATCTCATCCCGCCCTCGCCGCCGCTGCCGGG
ACCCACCGACATGTTCGCCCGCGTCCTCGTCTCCCTCGACGATGACCTGCTCTCCCAGGA
CTACCCGCGCAACGCCGAGGAGGCCTCCGATGCCGGGAGGGTCAAGGACGCCATGCGCGC
GCAGTGCGTGCCCCAGATCGCCCGCCACTGGCACGAGGCCGCCGTGTCCCTCCGCGCCGC
CGACCCCGCCGTCGCCGCAGTAGCCCTCGATGCGGCGCGGAGGTGCATCTCCTGGATCGA
TGTCTCCCTGGTCGCGAATGACGTGTTTGTTCCCTTGCTCTTTGACATTGCGCTGTCCCC
GGGGAGCGTGGCTCCTCTTGCTGCCGCGGCGGTGGGGTGCCTCTCTGCTGTGGCAGCAAA
GAGGATGGACGCGAGGGCAAAGGTGGCGTTGCTGAGGTCGCTCATGTCTGCCCAGAAGGG
GTTTGGTAGCCCTGACAGCGGTTTGAAAATGGCACATTTGGTGACGGCATACGCTGTCGA
GGCTCTCGAGTGTTATCGCAAGCTTGGCTCTAGTGATGCTGATGGAGCCGCGGCATTGGA
AATGCTGGAAGAGGTGCTGCCAGCTGTATTTGCGGCCGCAGAGAGCGGCGATGATGATGA
GGTTGATTCGGGCTCGGTGCTTGAGTTTTTATCTGGGTATGTGAGTACGATGAAGGCACC
GACAGAGAAGCAACTTGGACACTTGGGACAGATACTGGAGGTGGTGCGGATGCAGATGTC
ATATGATCCAGTTTATAGGGGTCATCTTGATGTCCTTGACAAGATAGGGAAGGAGGAGGA
AGACCTGATGGCAGAGCAGCGGAAGGATTTAATTGCACTATTTCGGAGCATTTGTCGTGT
GGCACCAGGTGCCACTCAGCTGTTCATAAGAGGGTTGCTTGTGACGGCCCTTTCATCTGC
AGAAGTTAGTGTTGAGGATGTTGAGGTCGCGCTTACTCTGTTTTACCGGCTTGGGGAAAT
AGTGGGTGAGGAAGAGATCCGGACTGGAGCTGGGTTAATTAGGGAGCTTGTCCCAATGCT
CCTTTCAGCGAGATTCTCATGCCACACACACCGCCTAGTTGCATTAGTGTACCTAGACAC
AATTAGCCGCTATATCAAGTTCATGCAGGAGAATGACCAATATGTGCCACATCTGCTTAC
TGTGTTCTTGGATGAGCGTGGCATACACCATCAGAATGCCCACGTGAGCTGCCATGCAGG
ATACTTGCTCATGAGAGCTATCAGGCTGTTGAAGGCTAAGCTAGTGCCTTACTTGGATAC
CATTTTGCAGAGCTTGCAAGATGCCCTAGTGCAATTCACTGCTACGGACTGGGCAAACAA
AGATATTAAGTTCTCCAGCTCAGAGGATGGCAGCCAAATATTCGAGGCTGTGGGACTGTT
GATCGGCATTGAAGAGGTGTCACCAGATAAGCAGGTTCAGTGCTTGACAGCTTTACTTAA
TCCTCTCTGTCAACAGATCGAGTCACTTGTTATGGATGCCAAAGCACAAGGACTTGAAGA
ATCATCTCCAAGAGCTATAGGTCTTCAACAGATTATTGTTGCATTGACTATGATCAGCAA
GGGATTTAATGAACGGCTTGTGATGGGAAGCAGGCCGACACTTGGCGTTATGTTCAAGAA
GACCCTTGATGTAGTTTTGCAAGTCCTCATCTCATTTCCTAATGTGAAGCCCCTGCGATC
TAAGATCATATCATTTCTCCACCGTATGGTTGAGATATTAGGCATTTCGGTGCTTCCATG
TATTCCAATTGCACTGCGACAGTTGCTCGTTGATAATGAGGCAAAAGATATGTCGGAATT
TCTGTACTTAATAAACCAAATAATATGCAAGTTTAAATCTTCAGCAAATGCCTTATTGGA
GGATGTGTTTCCTGCCATCGCAAGTCATTTATCTGTGATACTATCACACGATGCCTTTTC
AAATGGTTTTGCAAGCAATACTGAGGAAATGCGTGAGCTGCAAGAGCTGGAAAAGAGATT
TTACGCATTCTTGCTTCATATAGCAACACATGATCTGTCTACAGTTCTCCTAACTCCTAG
TTGTAGGCATTATCTAGAGAACATAATGCAGTTGCTTTTGATTACTTCATGCAGCCATAA
AGAGATATCACATCGGAAGACATGCGTACAGACTTTTGTCAACCTTATCAAAGACTGGTG
TAGTAGCTCTGAAATTGAAGATAAGCTTCCTGGCTTCCGAGTGTTTATGATTGAGAAGTT
CGCTACTGGTTGCTGTTTGCAGAGTGTCCTTGACAAGTCATTTAACTTCCGTGATGGAAT
TTCGATTGCCCTGTTTGGTGAAATCATGATGGCTCAAAAGGTTATGTATGAAAGATTTGG
CGAGAACTTTGTTGTAAATTTTGTAACAAAACTTCGAGAAGCACACTGCCCACCAGACCT
TGCTGAACAGTACTACCAAAAGTTACAGGGAAATGATATCAAGGCATTCAAGTCATTTTA
TGAATCACTTGTCATGAAAATAAGACAACAGCAGAATGGGAGTCTTGTCTTCAGATAGCG
TCATTCAATTATTTTAAATCTGTTTGCCAGTGAAAGATTCCTCAGTTCTACAATTTGAAT
ATAGGGTAGTTGTATCATCTATGTACATAAAGCTCTACCATTTCTGAGATCAGAAGATGT
ATACTGCGGGAATATTTTTACCGAGCCTGGCTACCGTGGCAAAGTTCCTTGATCAAGGCA
TGTTAGTGAGATGCAGGGGATACATCCCCAGAGTTTCTGCTGTGAGCATACAGGGTTTCA
TTATGTTTGTTTTGATATTTCTCTGGAAGTGATCATTGTTCTGCTCCGAGCTTGAAATTT
TTTGTAAGGCGATTCGGGTGAAGCTAAACAGATGGGATAGGCAAAAGAGTGATGTGTGGG
CCGTGTTTTTCCTGACAGAAACTGTCACACCGCCTGTTGTCGTGTTACCAAATTTTGGCA
GTGGTTTTTCACCCCTTTGTTAGCTGGGGTGCTGTACAGATTCTTTAATATAGTTGCGTC
GTTCGCATT