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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0613200-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:25236713:25237453:-1 gene:Os07g0613200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L27a-3. (Os07t0613200-00)
Sequence

ATGACGACGAGCCTGAGGAAGAACCGCAAGAAGCGCGGCCACGTGTCCGCCGGCCACGGC
CGCATCGGGAAGCACCGGAAGCACCCGGGAGGCCGGGGCAACGCCGGAGGCATGCACCAC
CACCGCATCCTCTTCGACAAGTACCACCCGGGCTACTTCGGCAAGGTCGGCATGCGCTAC
TTCCACAGGCTCCGCAACAAGTTCTACTCCCCGGCGGTGAACGTGGAGCGGCTCTGGTCG
ATGGTGCCCGCCGAGCAGGCGGCGGAGGCCGCCGGCGCCGGCAAGGCGCCCCTGCTGGAC
GTGACGCAGTTCGGCTACTTCAAGGTGCTCGGGAAGGGTCTGCTGCCGGAGAAGCCCATC
GTCGTCAAGGCCAAGCTCATCTCCAAGGTCGCCGAGAAGAAGATCAAGGCCGCCGGCGGC
GCCGTCGTGCTCACCGCCTAG

Peptide Sequence

PEP ID

Os07t0613200-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:25236713:25237453:-1 gene:Os07g0613200 transcript:Os07t0613200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L27a-3. (Os07t0613200-00)
Sequence

MTTSLRKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
FHRLRNKFYSPAVNVERLWSMVPAEQAAEAAGAGKAPLLDVTQFGYFKVLGKGLLPEKPI
VVKAKLISKVAEKKIKAAGGAVVLTA

Transcript Sequence

Transcript ID

Os07t0613200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:25236713:25237453:-1 gene:Os07g0613200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 60S ribosomal protein L27a-3. (Os07t0613200-00)
Sequence

CCGCCTCCATCCCTCCCATTCCCGAACACGTCCCCAAGGTAAGCCGGCGGCGGCGGCGAT
GACGACGAGCCTGAGGAAGAACCGCAAGAAGCGCGGCCACGTGTCCGCCGGCCACGGCCG
CATCGGGAAGCACCGGAAGCACCCGGGAGGCCGGGGCAACGCCGGAGGCATGCACCACCA
CCGCATCCTCTTCGACAAGTACCACCCGGGCTACTTCGGCAAGGTCGGCATGCGCTACTT
CCACAGGCTCCGCAACAAGTTCTACTCCCCGGCGGTGAACGTGGAGCGGCTCTGGTCGAT
GGTGCCCGCCGAGCAGGCGGCGGAGGCCGCCGGCGCCGGCAAGGCGCCCCTGCTGGACGT
GACGCAGTTCGGCTACTTCAAGGTGCTCGGGAAGGGTCTGCTGCCGGAGAAGCCCATCGT
CGTCAAGGCCAAGCTCATCTCCAAGGTCGCCGAGAAGAAGATCAAGGCCGCCGGCGGCGC
CGTCGTGCTCACCGCCTAGGGTTTGGTCCTGGCCCTGCCTTTTGTTCTGCTTCTTGGTTT
TTGAGATCTATTAATCTGAAGTAGTAGTCGTTTCTTGTCTCAAGCTATTTGCGTTAAGAA
GACTTGATTAGTTTGTTTTCTACTGTACTTCTTGCATGTTAAGACAGTACGTTATGAGAA
TTTTTGCACTAAGCGATGCCAGTTCATGTCAGATGCTTCAGATATATCAATGCTATTTTG
TGCTGCCAATTATGATTCGTT