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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0611500-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:25187993:25188788:1 gene:Os07g0611500 gene_biotype:protein_coding transcript_biotype:protein_coding description:C1-like domain containing protein. (Os07t0611500-00)
Sequence

ATGGCAACTGATGCCCACATAACACACTTCGCCCATCCACAACACCGCCTTCTCAAGACC
CCGTACAGCAGCGCCTCGCGCCATGTCTGCGACATCTGCGAAGCCAAGCTCTCCGGCCTC
GTCGGCTACCGCTGCAACGCCTGCGACTTCGACATCCATGAGGCGTGCGCCGACTACTTC
AAGGAGACCATCTCCTTCTTCGCCCACCCGTGGCACACCCTCACGCTCTGCCGCATGCCT
CCTGAGAATAAAGGATGGGTATGTGACCTCTGCATGGAGCATTGTCCCCCAGGAAATTTC
GTGTACCGCTGCATCCAGTGCAAGTTCGACGTGCACCCCCTGTGCACGTTGCTCCCTCAG
ACGATCCGCAGCCCGCTTCACCCACACCACGACCTCAACATGGTACCTTCTTCAGGGCAC
TGCAATGCTTGCCCTGAACGTTTGCCCGTGTGGCACTACATCTGTGGCCCTTGTACGTCT
CCGTCTTATCGGCTACATATCGGGTGCGTCTCTGGCGCGCCAAGCGGTGTCGGTCAGGGT
AGCGGCAGCACCACCAACCAGAACAACAGTAGCAGCCGTGGCCAGGGCACCGGCAACACC
AGCAGCGGTGCCAACCAAACTACCAGTGATGCTCGGAACACTACTGCTGTTGTTGAGCGG
AGCCGCAGCACTAGCGTCAGCAAGTTTCTCCTCAAGAAAAGCTTCATGATAGCGATTGAC
CTAGCAACCGGCGGGCTGGCATCGCCGGTGCTCGACGTCCTTCAAGCGGTCCTCGATTAA

Peptide Sequence

PEP ID

Os07t0611500-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:25187993:25188788:1 gene:Os07g0611500 transcript:Os07t0611500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:C1-like domain containing protein. (Os07t0611500-00)
Sequence

MATDAHITHFAHPQHRLLKTPYSSASRHVCDICEAKLSGLVGYRCNACDFDIHEACADYF
KETISFFAHPWHTLTLCRMPPENKGWVCDLCMEHCPPGNFVYRCIQCKFDVHPLCTLLPQ
TIRSPLHPHHDLNMVPSSGHCNACPERLPVWHYICGPCTSPSYRLHIGCVSGAPSGVGQG
SGSTTNQNNSSSRGQGTGNTSSGANQTTSDARNTTAVVERSRSTSVSKFLLKKSFMIAID
LATGGLASPVLDVLQAVLD

Transcript Sequence

Transcript ID

Os07t0611500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:25187993:25188788:1 gene:Os07g0611500 gene_biotype:protein_coding transcript_biotype:protein_coding description:C1-like domain containing protein. (Os07t0611500-00)
Sequence

GCCAAAGACATGGCAACTGATGCCCACATAACACACTTCGCCCATCCACAACACCGCCTT
CTCAAGACCCCGTACAGCAGCGCCTCGCGCCATGTCTGCGACATCTGCGAAGCCAAGCTC
TCCGGCCTCGTCGGCTACCGCTGCAACGCCTGCGACTTCGACATCCATGAGGCGTGCGCC
GACTACTTCAAGGAGACCATCTCCTTCTTCGCCCACCCGTGGCACACCCTCACGCTCTGC
CGCATGCCTCCTGAGAATAAAGGATGGGTATGTGACCTCTGCATGGAGCATTGTCCCCCA
GGAAATTTCGTGTACCGCTGCATCCAGTGCAAGTTCGACGTGCACCCCCTGTGCACGTTG
CTCCCTCAGACGATCCGCAGCCCGCTTCACCCACACCACGACCTCAACATGGTACCTTCT
TCAGGGCACTGCAATGCTTGCCCTGAACGTTTGCCCGTGTGGCACTACATCTGTGGCCCT
TGTACGTCTCCGTCTTATCGGCTACATATCGGGTGCGTCTCTGGCGCGCCAAGCGGTGTC
GGTCAGGGTAGCGGCAGCACCACCAACCAGAACAACAGTAGCAGCCGTGGCCAGGGCACC
GGCAACACCAGCAGCGGTGCCAACCAAACTACCAGTGATGCTCGGAACACTACTGCTGTT
GTTGAGCGGAGCCGCAGCACTAGCGTCAGCAAGTTTCTCCTCAAGAAAAGCTTCATGATA
GCGATTGACCTAGCAACCGGCGGGCTGGCATCGCCGGTGCTCGACGTCCTTCAAGCGGTC
CTCGATTAATTGCCAC