Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0610200-00
CDS Infomation

cds chromosome:IRGSP-1.0:7:25117766:25118480:1 gene:Os07g0610200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein binding protein. (Os07t0610200-00)
Sequence

ATGGCGACTAGGCAGCGAAGGCACTTCGCCCATCCGCAACACCTGCTTCTCCGGACGCAC
TACAGCACCACCTCGAGCCATTTCTGCGACATCTGCCGAACCAACGTCGCCGGCATGGTC
GGCTACCGCTGCAACACCTGCGACATCGACATCCACGACGCCTGCGCCGATTACTTCGAG
GAGACAGTCTCCTTCTTCGCCCACCCGTGGCACACCCTCACGCTCAGCACCATCCCCGAC
GACGATACCAACAGGTGGTCGTGCGACCTCTGCACGGAAAGCTGTCCCCGGGGAAGCTTC
GTCTACCGCTGCGCACAGTGCGGCTTCGACGCTCACCCACTGTGCACGCTGCTCCCGCAG
ACGATCCGTAGCCCGCTTCACCCGCAGCATGATCTCAACATGGCCCCTTCATGGGGGACA
TGCTCAGCGTGTCATCAAGGCCTGAACATGTGGCACTACCGCTGTGGATTTTGCCTCTAT
AAGCTGCACGTCGTGTGCCCCTCTGGCGCGGCAAACGCTGGCCAAGGTGACACCAGCCGT
TCTCACAACGCTGGTGCTGGTGCTGCTGCTGCTACGCCGGGCTCGAGCCGCGCCACTCGT
ATCGCCAAGTTCCTCCTCAGGACAAGTCTCAACATCGCGATCAACGCAGCAACCGGCGCG
CTGGCAACACCGGTGCTCGATGTCCTTGCCACGGCCTTGGATGATCAGGAGTGA

Peptide Sequence

PEP ID

Os07t0610200-00
PEP Infomation

pep chromosome:IRGSP-1.0:7:25117766:25118480:1 gene:Os07g0610200 transcript:Os07t0610200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein binding protein. (Os07t0610200-00)
Sequence

MATRQRRHFAHPQHLLLRTHYSTTSSHFCDICRTNVAGMVGYRCNTCDIDIHDACADYFE
ETVSFFAHPWHTLTLSTIPDDDTNRWSCDLCTESCPRGSFVYRCAQCGFDAHPLCTLLPQ
TIRSPLHPQHDLNMAPSWGTCSACHQGLNMWHYRCGFCLYKLHVVCPSGAANAGQGDTSR
SHNAGAGAAAATPGSSRATRIAKFLLRTSLNIAINAATGALATPVLDVLATALDDQE

Transcript Sequence

Transcript ID

Os07t0610200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:25117766:25118480:1 gene:Os07g0610200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein binding protein. (Os07t0610200-00)
Sequence

CATGGCGACTAGGCAGCGAAGGCACTTCGCCCATCCGCAACACCTGCTTCTCCGGACGCA
CTACAGCACCACCTCGAGCCATTTCTGCGACATCTGCCGAACCAACGTCGCCGGCATGGT
CGGCTACCGCTGCAACACCTGCGACATCGACATCCACGACGCCTGCGCCGATTACTTCGA
GGAGACAGTCTCCTTCTTCGCCCACCCGTGGCACACCCTCACGCTCAGCACCATCCCCGA
CGACGATACCAACAGGTGGTCGTGCGACCTCTGCACGGAAAGCTGTCCCCGGGGAAGCTT
CGTCTACCGCTGCGCACAGTGCGGCTTCGACGCTCACCCACTGTGCACGCTGCTCCCGCA
GACGATCCGTAGCCCGCTTCACCCGCAGCATGATCTCAACATGGCCCCTTCATGGGGGAC
ATGCTCAGCGTGTCATCAAGGCCTGAACATGTGGCACTACCGCTGTGGATTTTGCCTCTA
TAAGCTGCACGTCGTGTGCCCCTCTGGCGCGGCAAACGCTGGCCAAGGTGACACCAGCCG
TTCTCACAACGCTGGTGCTGGTGCTGCTGCTGCTACGCCGGGCTCGAGCCGCGCCACTCG
TATCGCCAAGTTCCTCCTCAGGACAAGTCTCAACATCGCGATCAACGCAGCAACCGGCGC
GCTGGCAACACCGGTGCTCGATGTCCTTGCCACGGCCTTGGATGATCAGGAGTGA