Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0608200-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:24996740:25001214:-1 gene:Os07g0608200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEX description:Similar to CCAAT-binding transcription factor subunit B (CBF-B) (NF-Y protein chain A) (NF-YA) (CAAT-box DNA binding protein subunit A). Splice isoform Short. (Os07t0608200-01)
Sequence	ATGCTAATGCTTTTGCGACAAATGGAAGATCATCGAGCCCATACTACGCCCAACTATGAT TTTTTCTCTGGAGATTATCAGATGAAGCAGTTAGGTCATAAGATGTATGATCAAGATTCC CCGTCAAGCGATTCTGGACAGTCACACCAAGAAGAATCTGCCATGAATGATAGCAGTCCA AATGAGCGACATACCTCAACACAATCTGACAATGATGATGGTCATCAGATGCCAGATCAG GACAAAACAAAGTCAGTATCATCGTTGGGGAATCCAGGAGCTTTGCCTCCAAAGCTCAAC TATAGCCAATCCTTTGCTTGTATTCCTTATACAGCTGATGCATACTATGGTGGGGTCTTG ACTGGATATTCTTCACATGCAATTGTTCATCCCCAGCAAAATGGTACAGCTAACTCCCGG GTGCCGTTGCCTGTTGAGCCTGCAGCAGAAGAGCCAATATTTGTAAACGCAAAGCAGTAC CATGCAATTCTTAGGAGGAGACAGATACGAGCTAAATTGGAGGCCCAAAATAAGTTGGTG AAAGGTCGGAAGCCATACCTCCATGAATCTCGGCATCGCCATGCCATGAAGCGAGCTCGT GGATCTGGAGGGCGCTTCCTCAACACAAAGCAGCTCGAGGAGCAGAAGCAGCAACAGGAG GAGGAGGCCGCATCCGGTGGCGCGAGCTCTGGCAATAGGACATGCCTTCAGAATGGCACC GGTAGCGCGCCTTCAGCTTCCTCTCCCTCTGAAATCGCGAGCGTCTCAACCAGCAGAGAA TTCCTTGGTAACCATGAGCAGAGCCACTTCCCCTCAGCTGGCTTCCTTCCCACAATGAGC TTCAGAGCGCAGAATGGCGGAGATGGGAAGCTGGTCGCGAACGCCATTCACCAGCGCGTT TCCATGATGAGGTGA

Peptide Sequence

PEP ID	Os07t0608200-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:24996740:25001214:-1 gene:Os07g0608200 transcript:Os07t0608200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEX description:Similar to CCAAT-binding transcription factor subunit B (CBF-B) (NF-Y protein chain A) (NF-YA) (CAAT-box DNA binding protein subunit A). Splice isoform Short. (Os07t0608200-01)
Sequence	MLMLLRQMEDHRAHTTPNYDFFSGDYQMKQLGHKMYDQDSPSSDSGQSHQEESAMNDSSP NERHTSTQSDNDDGHQMPDQDKTKSVSSLGNPGALPPKLNYSQSFACIPYTADAYYGGVL TGYSSHAIVHPQQNGTANSRVPLPVEPAAEEPIFVNAKQYHAILRRRQIRAKLEAQNKLV KGRKPYLHESRHRHAMKRARGSGGRFLNTKQLEEQKQQQEEEAASGGASSGNRTCLQNGT GSAPSASSPSEIASVSTSREFLGNHEQSHFPSAGFLPTMSFRAQNGGDGKLVANAIHQRV SMMR

Transcript Sequence

Transcript ID	Os07t0608200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:24996740:25001214:-1 gene:Os07g0608200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEX description:Similar to CCAAT-binding transcription factor subunit B (CBF-B) (NF-Y protein chain A) (NF-YA) (CAAT-box DNA binding protein subunit A). Splice isoform Short. (Os07t0608200-01)
Sequence	ATAGAGCACAGTCCTCTCCTCTTCCCCGTGCTCCCCATTTCTGCTTCTTTTCCCACAAAT TTCTCTCTCTATCTCGGAAAGGATTCGGGAGACTTGAAGAGAGGAGCTCGAAGCGGGACA GGAGAGAGAGGCTAATTATAGAAGTACACGAAGAAAAATGGTGCCTGGACCAAAGTGAGA CCATCTCATAATGCTAATGCTTTTGCGACAAATGGAAGATCATCGAGCCCATACTACGCC CAACTATGATTTTTTCTCTGGAGATTATCAGATGAAGCAGTTAGGTCATAAGATGTATGA TCAAGATTCCCCGTCAAGCGATTCTGGACAGTCACACCAAGAAGAATCTGCCATGAATGA TAGCAGTCCAAATGAGCGACATACCTCAACACAATCTGACAATGATGATGGTCATCAGAT GCCAGATCAGGACAAAACAAAGTCAGTATCATCGTTGGGGAATCCAGGAGCTTTGCCTCC AAAGCTCAACTATAGCCAATCCTTTGCTTGTATTCCTTATACAGCTGATGCATACTATGG TGGGGTCTTGACTGGATATTCTTCACATGCAATTGTTCATCCCCAGCAAAATGGTACAGC TAACTCCCGGGTGCCGTTGCCTGTTGAGCCTGCAGCAGAAGAGCCAATATTTGTAAACGC AAAGCAGTACCATGCAATTCTTAGGAGGAGACAGATACGAGCTAAATTGGAGGCCCAAAA TAAGTTGGTGAAAGGTCGGAAGCCATACCTCCATGAATCTCGGCATCGCCATGCCATGAA GCGAGCTCGTGGATCTGGAGGGCGCTTCCTCAACACAAAGCAGCTCGAGGAGCAGAAGCA GCAACAGGAGGAGGAGGCCGCATCCGGTGGCGCGAGCTCTGGCAATAGGACATGCCTTCA GAATGGCACCGGTAGCGCGCCTTCAGCTTCCTCTCCCTCTGAAATCGCGAGCGTCTCAAC CAGCAGAGAATTCCTTGGTAACCATGAGCAGAGCCACTTCCCCTCAGCTGGCTTCCTTCC CACAATGAGCTTCAGAGCGCAGAATGGCGGAGATGGGAAGCTGGTCGCGAACGCCATTCA CCAGCGCGTTTCCATGATGAGGTGAGGTGAAGAGGGGTGAAGTGGGTTCAGCTCAGCACC ATCACTTTGGCTCTCTCCCTGCTGGTGGCAATTCATCCTTGGCTTATGAAAATACCTTAT GGGAAAAAAAAAAGTAGTTTCATCCTCAAATGGACCAAACATGTGTGGCTCCATTTTAAG TTTTCCTGTAACTAAAAGCACTGCAATGATCAACTGACTGTTGGTTCTGTTTGTGGATGC TTATATCTGTACTTGCTGTATCTAATACTGAACTCTAAGTTGAAACCCTGAAACTGATGG TCCCCGTGAATATTGTAGCTTGCATTTTATC