Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0607700-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:24973608:24976582:1 gene:Os07g0607700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Di-trans-poly-cis-decaprenylcistransferase family protein. (Os07t0607700-01)
Sequence

ATGCTTGGTTCACTTATCTCTTACTCACCTTCAGTGAATCCAAAGACGGAGAACCCTGAT
GAGTTAATTGCGACTGGTGTCCTTGCGAGTCTGCAAAACTTTATCCGCAAATGCATCGTA
GCTGTCCTCTCATATGGCCCAATGCCTAAACATATTGCATTTATTATGGACGGTAACCGT
AGATATGCTAAATTCAGGAGTATCCAGGAAGGCTCTGGTCACAGGATGGGCTTCTCTGCT
CTCATTGCCAGCCTACTCTACTGCTATGAAATGGGCGTGAAGTATATCACAGTGTATGCA
TTTAGCATCGATAATTTTAAGCGAGATCTGACTGAGGTGAAATCCTTGATGGAGTTAATG
GAGGAAAAGATCAATGAACTGCTAGAAAACAGAAATGTCATCAACAAGGTTAACTGTAAG
ATCAACTTCTGGGGGAAGTTGGACATGTTGAGCGAACCGGTGAGGGTAGCAGCTGAGAAA
CTGATGGTTAGCACTGCTGAAAACAAGGGACTGGTCTTCTCTGTTTGCATGCCATACAAC
TCCACTTCTGAGATTGTCATTGCGGTCAATAAGGTCTGTGCAGAAAGGAGGGATATACTG
CAGAGGGAGGATGTTGACAGTGTTGCGAATAATGGTGTGCATTCAGATATTTCAGTGGCA
GATCTGGACCACCATATGTACAGCGCTGGTTGCCCCGATCCTGATATTGTGATCCGGACC
TCAGGCGAGACTCGCCTGAGCAATTTCCTTCTGTGGCAGACGACGTTCAGTCATTTGCAG
AATCCAGACCCTCTTTGGCCGGAGTTCTCTTTCAAGCACCTTGTCTGGGCCATACTACAG
TACCAAAGAGTTCACCCTTATATTGAGCAAAGCAGAAATCTGGCTAAGAAGCAGCTGTAA

Peptide Sequence

PEP ID

Os07t0607700-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:24973608:24976582:1 gene:Os07g0607700 transcript:Os07t0607700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Di-trans-poly-cis-decaprenylcistransferase family protein. (Os07t0607700-01)
Sequence

MLGSLISYSPSVNPKTENPDELIATGVLASLQNFIRKCIVAVLSYGPMPKHIAFIMDGNR
RYAKFRSIQEGSGHRMGFSALIASLLYCYEMGVKYITVYAFSIDNFKRDLTEVKSLMELM
EEKINELLENRNVINKVNCKINFWGKLDMLSEPVRVAAEKLMVSTAENKGLVFSVCMPYN
STSEIVIAVNKVCAERRDILQREDVDSVANNGVHSDISVADLDHHMYSAGCPDPDIVIRT
SGETRLSNFLLWQTTFSHLQNPDPLWPEFSFKHLVWAILQYQRVHPYIEQSRNLAKKQL

Transcript Sequence

Transcript ID

Os07t0607700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:24973608:24976582:1 gene:Os07g0607700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Di-trans-poly-cis-decaprenylcistransferase family protein. (Os07t0607700-01)
Sequence

GCAATCAATTGCTCACCGGCGGAGAGGCCGCCGCCGCCGCCGCGTTCTTCCTCCTCCTGA
GCCCTAAAAGGGAATCCAGCTCGAGGTCGAACCAACCAAAAGCTTGGCGGCGTCGCGGAG
ACGCGGCCAACCTGCTCCACATACACCGCCCGTTTCGCCAGTGTCTTTTCTCTTTTTACT
GGCGCGCGCGCGGGCGCGGGCGCGGGAGAGGCGAGGGAGTGGTGGTGGCGCGCTGCAGGG
GGGGCTGCTTGGCTGCGGAGTGCGGACGACGGCTATAAAGAGGGCGGAAAGAGAGCGCCC
GATCCCGCTACTCATCAGCTGCCGTCTCCTCTGTGTGTGTGCTCGCGCGCGCGCTCCGGT
TGCTCCTCCTTGGGTTCTTGATTTGCTACACGCGTTTGCTTGCTCACCACGTGTTTGATG
GAATACCTGTGAGGTGAGTTTGCAGGCCTGATACTGCCTGTTGGTCCCTCCCCATCAAAA
TGCTTGGTTCACTTATCTCTTACTCACCTTCAGTGAATCCAAAGACGGAGAACCCTGATG
AGTTAATTGCGACTGGTGTCCTTGCGAGTCTGCAAAACTTTATCCGCAAATGCATCGTAG
CTGTCCTCTCATATGGCCCAATGCCTAAACATATTGCATTTATTATGGACGGTAACCGTA
GATATGCTAAATTCAGGAGTATCCAGGAAGGCTCTGGTCACAGGATGGGCTTCTCTGCTC
TCATTGCCAGCCTACTCTACTGCTATGAAATGGGCGTGAAGTATATCACAGTGTATGCAT
TTAGCATCGATAATTTTAAGCGAGATCTGACTGAGGTGAAATCCTTGATGGAGTTAATGG
AGGAAAAGATCAATGAACTGCTAGAAAACAGAAATGTCATCAACAAGGTTAACTGTAAGA
TCAACTTCTGGGGGAAGTTGGACATGTTGAGCGAACCGGTGAGGGTAGCAGCTGAGAAAC
TGATGGTTAGCACTGCTGAAAACAAGGGACTGGTCTTCTCTGTTTGCATGCCATACAACT
CCACTTCTGAGATTGTCATTGCGGTCAATAAGGTCTGTGCAGAAAGGAGGGATATACTGC
AGAGGGAGGATGTTGACAGTGTTGCGAATAATGGTGTGCATTCAGATATTTCAGTGGCAG
ATCTGGACCACCATATGTACAGCGCTGGTTGCCCCGATCCTGATATTGTGATCCGGACCT
CAGGCGAGACTCGCCTGAGCAATTTCCTTCTGTGGCAGACGACGTTCAGTCATTTGCAGA
ATCCAGACCCTCTTTGGCCGGAGTTCTCTTTCAAGCACCTTGTCTGGGCCATACTACAGT
ACCAAAGAGTTCACCCTTATATTGAGCAAAGCAGAAATCTGGCTAAGAAGCAGCTGTAAT
CACATCCTCCCTGGGAGGAGATAGAAACCATCATACAAGATATCTGTAGTTACACAATAA
TCTGTATTCTCCTTTGATATCTCCTAGAATGTGAAATATACAAAAAAAAGATAGCTATTC
CATTGTAGGCAGGCCAAACATGTGTATGCTTGAGTTGGTCCAAATGTGTGAAATGTAATA
ACATTTGGTCTAAGCAAAGTGCCTTATTTTCCCTG