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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0605400-02
CDS Infomation

cds chromosome:IRGSP-1.0:7:24809677:24810354:1 gene:Os07g0605400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EGG APPARATUS-1 protein (ZmEA1). (Os07t0605400-01);Similar to EGG APPARATUS-1 protein (ZmEA1). (Os07t0605400-02)
Sequence

ATGGTTGGCGTGAGCGAGTTCGTCGGCGGCCTGCTCAACTCCGCCAAGAGCGCGGTGGCG
GCCGTGGCCTCCACCGTGGCGGCGGCGGCCAAGCCGGGCCTCGCCGCGGGGGTCGGCTTC
GTGAAGGAGCAGGGCGTGGGGAAGTCGGCGCTGGCCGTCGGCGGGGCCGCCGTGGCCGCC
TACTTCCTCTGGCCCACGGCGGCAGTCGGCGGCGCCATCATGAACGCGCCGGGCGCCGCC
GGCTACGTCATCTCCCGCGCGGCGTTCCTGGCGAACCCCAAGCTCTACTTCCACCTCCTG
CGCACGGTGGGCGCCAAGGCGGCCGCCGCCGCTTTCCTGTAG

Peptide Sequence

PEP ID

Os07t0605400-02
PEP Infomation

pep chromosome:IRGSP-1.0:7:24809677:24810354:1 gene:Os07g0605400 transcript:Os07t0605400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EGG APPARATUS-1 protein (ZmEA1). (Os07t0605400-01);Similar to EGG APPARATUS-1 protein (ZmEA1). (Os07t0605400-02)
Sequence

MVGVSEFVGGLLNSAKSAVAAVASTVAAAAKPGLAAGVGFVKEQGVGKSALAVGGAAVAA
YFLWPTAAVGGAIMNAPGAAGYVISRAAFLANPKLYFHLLRTVGAKAAAAAFL

Transcript Sequence

Transcript ID

Os07t0605400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:24809677:24810354:1 gene:Os07g0605400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EGG APPARATUS-1 protein (ZmEA1). (Os07t0605400-01);Similar to EGG APPARATUS-1 protein (ZmEA1). (Os07t0605400-02)
Sequence

ACCTCGGTAGCTAATACTACTTTACTTTATTACTGTCGTTTTGGTTTGCTTAGCAGAATA
TGGTTGGCGTGAGCGAGTTCGTCGGCGGCCTGCTCAACTCCGCCAAGAGCGCGGTGGCGG
CCGTGGCCTCCACCGTGGCGGCGGCGGCCAAGCCGGGCCTCGCCGCGGGGGTCGGCTTCG
TGAAGGAGCAGGGCGTGGGGAAGTCGGCGCTGGCCGTCGGCGGGGCCGCCGTGGCCGCCT
ACTTCCTCTGGCCCACGGCGGCAGTCGGCGGCGCCATCATGAACGCGCCGGGCGCCGCCG
GCTACGTCATCTCCCGCGCGGCGTTCCTGGCGAACCCCAAGCTCTACTTCCACCTCCTGC
GCACGGTGGGCGCCAAGGCGGCCGCCGCCGCTTTCCTGTAGGGAAGAAATGGTATCCGCC
GCCGCCGACGTCCGCCGCTCGCTGGCGTTGGCTTGCTGGTTCGTGTGTGGCGTTTGGTTG
AGTGAGTAATCGCCTTGCTAATTAAGGAGGGATTTGTGATGGAGTTCATGCTTAGATTAC
TCTTGTTTGGCTGTGAATCTGTGTGGGCTAGTAATTCACGGTGTTTAGGCGACGTGGTTA
TATGCTAGTACATCCATGGTCATGTGTAATAAGGTGCCGTGTAATAAGTTTTTGTGGTAA
TTAAGTATGTTGCCGTTT