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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0604700-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:24768075:24769065:1 gene:Os07g0604700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:B12D-like protein 1 description:B12D-like protein, Flooding tolerance during seed germination and early seedling growth (Os07t0604700-01)
Sequence

ATGGGCCGTTGGGTGAAGCCAGATGTATACCCGCTGATCGTGGCGATGTCTCTGGTGGGA
GGGATGTGCGTGTTCCAGCTGACGAGGAACGTGTTCATGAACCCGGACGTGAGGGTGAAC
AAGAGCCACCGCCAGAGCGCCGTGCTGGAGAACGCCGACGAGGGGGAGAAGTATCACCAC
CACGCCTTCCGCCGATTCCTCGGCACGCAGCGCCCCGAGGTCTTCCCGGCGATCAACCGC
TTCTTCGCCGGCCCGGCCACCGTCCCCAAGAGTGACCGTCAAAACTGA

Peptide Sequence

PEP ID

Os07t0604700-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:24768075:24769065:1 gene:Os07g0604700 transcript:Os07t0604700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:B12D-like protein 1 description:B12D-like protein, Flooding tolerance during seed germination and early seedling growth (Os07t0604700-01)
Sequence

MGRWVKPDVYPLIVAMSLVGGMCVFQLTRNVFMNPDVRVNKSHRQSAVLENADEGEKYHH
HAFRRFLGTQRPEVFPAINRFFAGPATVPKSDRQN

Transcript Sequence

Transcript ID

Os07t0604700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:24768075:24769065:1 gene:Os07g0604700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:B12D-like protein 1 description:B12D-like protein, Flooding tolerance during seed germination and early seedling growth (Os07t0604700-01)
Sequence

ATTGTGCATCGAGTTCCAGCCCAGATTTCTTCAGTTTCAAGGCTTCGATCTATCGGATCA
TTCGTTGCAGTCCTAGCAAGAAACAAAAACAGCAGCAGCGTCAGGCAGACGAGGATCATC
CATCGATCGACATGGGCCGTTGGGTGAAGCCAGATGTATACCCGCTGATCGTGGCGATGT
CTCTGGTGGGAGGGATGTGCGTGTTCCAGCTGACGAGGAACGTGTTCATGAACCCGGACG
TGAGGGTGAACAAGAGCCACCGCCAGAGCGCCGTGCTGGAGAACGCCGACGAGGGGGAGA
AGTATCACCACCACGCCTTCCGCCGATTCCTCGGCACGCAGCGCCCCGAGGTCTTCCCGG
CGATCAACCGCTTCTTCGCCGGCCCGGCCACCGTCCCCAAGAGTGACCGTCAAAACTGAT
CCTCCAAATGCTTATTAGCCGCTATATAGTAATGTACTCCTATATTAATTATAGCCAAAT
GAGAGGCTGATTATAGTGCTATACACGGGTACTTTAATTACTGAGTTTTGTTACTGGATA
TGTGTCGCATACGTGCGAACTTAATCGTATCTGAATAAAATGAGATAAAAATGAAGAAAT
GGCACCT