Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0604300-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:24751787:24755315:1 gene:Os07g0604300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BC1L6 description:Similar to Phytochelatin synthetase (Fragment). (Os07t0604300-01)
Sequence	ATGGCGCTCCTGCTGCTGCGTATGGGCGTCTCCGTCGCGCTGCTCGTCGCCTTCTTCTCC TCTCTGATTCCGTCGTCAGAGGCATACGATCCGCTTGATCCAAATGGGAACATAACAATC AAGTGGGATGTGCTGCAATGGACTCCAGATGGATATGTTGCTGTTGTTTCACTATACAAC TATCAGCAGTATCGACACATTCAATCACCCGGATGGAAACTCGGATGGGTGTGGGCAAAG AAGGAGATAATCTGGGCGATGAACGGCGGCCAAGCGACGGAGCAAGGCGACTGCTCAAAG TTCAAATCAAATATCCCACATTGCTGCAAGAAAGATCCTGAGATCGTGGACCTGCTCCCG GGAACCCCTTACAACATGCAGATTGCCAACTGCTGCAAGGGAGGAGTGCTCAACTCGTGG GCACAGGACCCTGCAAATGCCATAGCATCATTCCAAGTCAGTGTTGGTCAGGCAGGGACG ACGAACAAGACGGTGCGGGTGCCGAGAAATTTCACCCTGAAATCTCCAGGTCCAGGGTAT ACCTGTGGCAGTGCCAAGGTTGTGAGACCTACCAAGTTTTTTTCGCAGGATGGAAGGAGA ACAACTCAGGCTCACATGACATGGAATGTGACTTGCACATATTCACAGATTGTCGCGCAA AGATCTCCGACGTGCTGCGTTTCGCTCTCGTCTTTTTACAATGATACCATAGTTAACTGC CCAACATGCTCATGTGGCTGCCAGAATAATAAACCAGGAAGCTGTGTAGAGGGAAATTCT CCTTATTTGGCTTCTGTTGTGAACACCCATAACAAGGACAGCTTGACACCTCTAGTCCAG TGCACTTCTCATATGTGCCCAATAAGAGTTCATTGGCATGTGAAGGTTAACTACAAGGAG TACTGGAGGGTCAAGATCACAGTGACAAACTTCAATTACAGGATGAACTACTCTCAGTGG AACCTAGTCACTCAGCACCCCAGTTTTGACAATCTGACAACCATTTTCAGCTTCAACTAC AAATCTTTGAACCCATATGGAGTAATAAATGATACCGCGATGTTATGGGGAATCAAGTAC TACAATGACTTGCTCATGACGGCGGGTCCAGATGGAAATGTTCAGTCTGAGCTTCTGTTC AAGAAGGACCCCAAGAGTTTCACCTTTGAGAAAGGCTGGGCCTTCCCAAGACGTGTATAC TTCAATGGTGACAACTGTGTGATGCCACCACCAGATGCATATCCATGGCTGCCAAATGCT TCAACAAGAGTGATGTCTTCAATTCTCCTTCCATTCATTACCATTTGGACAGCACTGACA TTCTTGATGGTTTACGCATAG

Peptide Sequence

PEP ID	Os07t0604300-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:24751787:24755315:1 gene:Os07g0604300 transcript:Os07t0604300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BC1L6 description:Similar to Phytochelatin synthetase (Fragment). (Os07t0604300-01)
Sequence	MALLLLRMGVSVALLVAFFSSLIPSSEAYDPLDPNGNITIKWDVLQWTPDGYVAVVSLYN YQQYRHIQSPGWKLGWVWAKKEIIWAMNGGQATEQGDCSKFKSNIPHCCKKDPEIVDLLP GTPYNMQIANCCKGGVLNSWAQDPANAIASFQVSVGQAGTTNKTVRVPRNFTLKSPGPGY TCGSAKVVRPTKFFSQDGRRTTQAHMTWNVTCTYSQIVAQRSPTCCVSLSSFYNDTIVNC PTCSCGCQNNKPGSCVEGNSPYLASVVNTHNKDSLTPLVQCTSHMCPIRVHWHVKVNYKE YWRVKITVTNFNYRMNYSQWNLVTQHPSFDNLTTIFSFNYKSLNPYGVINDTAMLWGIKY YNDLLMTAGPDGNVQSELLFKKDPKSFTFEKGWAFPRRVYFNGDNCVMPPPDAYPWLPNA STRVMSSILLPFITIWTALTFLMVYA

Transcript Sequence

Transcript ID	Os07t0604300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:24751787:24755315:1 gene:Os07g0604300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BC1L6 description:Similar to Phytochelatin synthetase (Fragment). (Os07t0604300-01)
Sequence	GTCTTGTCTGACTTCTTGTTGCCTCTTGCCTCCTTCTTCTTCTTCTTCGTCTTCGTCGTC GCGAAATACAGGCGTGTGGGGCGAGAGTGATCAGGTGGCAGCTGGGTGTTTCTTCTTCTT CTTCTTCAGCTCGAGTTCTTCCTTAGCCATGGCGCTCCTGCTGCTGCGTATGGGCGTCTC CGTCGCGCTGCTCGTCGCCTTCTTCTCCTCTCTGATTCCGTCGTCAGAGGCATACGATCC GCTTGATCCAAATGGGAACATAACAATCAAGTGGGATGTGCTGCAATGGACTCCAGATGG ATATGTTGCTGTTGTTTCACTATACAACTATCAGCAGTATCGACACATTCAATCACCCGG ATGGAAACTCGGATGGGTGTGGGCAAAGAAGGAGATAATCTGGGCGATGAACGGCGGCCA AGCGACGGAGCAAGGCGACTGCTCAAAGTTCAAATCAAATATCCCACATTGCTGCAAGAA AGATCCTGAGATCGTGGACCTGCTCCCGGGAACCCCTTACAACATGCAGATTGCCAACTG CTGCAAGGGAGGAGTGCTCAACTCGTGGGCACAGGACCCTGCAAATGCCATAGCATCATT CCAAGTCAGTGTTGGTCAGGCAGGGACGACGAACAAGACGGTGCGGGTGCCGAGAAATTT CACCCTGAAATCTCCAGGTCCAGGGTATACCTGTGGCAGTGCCAAGGTTGTGAGACCTAC CAAGTTTTTTTCGCAGGATGGAAGGAGAACAACTCAGGCTCACATGACATGGAATGTGAC TTGCACATATTCACAGATTGTCGCGCAAAGATCTCCGACGTGCTGCGTTTCGCTCTCGTC TTTTTACAATGATACCATAGTTAACTGCCCAACATGCTCATGTGGCTGCCAGAATAATAA ACCAGGAAGCTGTGTAGAGGGAAATTCTCCTTATTTGGCTTCTGTTGTGAACACCCATAA CAAGGACAGCTTGACACCTCTAGTCCAGTGCACTTCTCATATGTGCCCAATAAGAGTTCA TTGGCATGTGAAGGTTAACTACAAGGAGTACTGGAGGGTCAAGATCACAGTGACAAACTT CAATTACAGGATGAACTACTCTCAGTGGAACCTAGTCACTCAGCACCCCAGTTTTGACAA TCTGACAACCATTTTCAGCTTCAACTACAAATCTTTGAACCCATATGGAGTAATAAATGA TACCGCGATGTTATGGGGAATCAAGTACTACAATGACTTGCTCATGACGGCGGGTCCAGA TGGAAATGTTCAGTCTGAGCTTCTGTTCAAGAAGGACCCCAAGAGTTTCACCTTTGAGAA AGGCTGGGCCTTCCCAAGACGTGTATACTTCAATGGTGACAACTGTGTGATGCCACCACC AGATGCATATCCATGGCTGCCAAATGCTTCAACAAGAGTGATGTCTTCAATTCTCCTTCC ATTCATTACCATTTGGACAGCACTGACATTCTTGATGGTTTACGCATAGTGAAAGGAAAT CGTAATTTTACGTATTCAGGAAAGTTTTGACCTTGTTGTGCATTACAAAGTTTTAGATGA TATGTTGCATGAAGAGAAGATTCAGTGCAGATACCTAACCATAAACCGTCGTTGATCATT GTATAAACTTACTTGTATACATTTAATCTCAGACAAGATAAGATGCAAACACAGTACTTC TTAAGGAATTTTATCCTCTCTTCCTTT