Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os07t0603900-01
CDS Infomation	cds chromosome:IRGSP-1.0:7:24724562:24728092:1 gene:Os07g0603900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0603900-01)
Sequence	ATGTGGCGCCGCCACCTCCTCCGCCGCCTCCTGCCGTCTCCGGCCACCGCCGCCGCCGCC GCCGCCTCCCCCTCGCCGGCGATCCGCCTCCTATCCACCGCCTCCCCGGATCCCGCCCCG CCGGCGACGCTCGCCTCCTCCCTCGCCGGGGCGCTCTCCGCGCTGTCCTCCACCCCGCCA CCGGCCACCTCCCCGGACGCCTACTTCTCCCTCCACTTCTCCGACGTGCGCCCCACCAAC GCGCTGCTCGCCGAGGCGCTCGCGCTCGCCCCGCCGGCCACGTCCCGCGCCGCCGCGGAG CTCTTCCGCTTCCTCGTCCGCCGCCGCTCGCTCCACCCCTCCGACTCCGCGCTCGCGCCC GTCGTGCGGCATCTCGCCCGCCGCCGCGACTTCCCCGCGGTGCGCTCGCTCGTCCAGGAG TTCCCCTCCGCGCTGGGGCACGACACGCTCGACGCGTACCTCCTCAGCCTCGCCAGGGCC GGCCGCGCCACCGACGCGGTCAAGGTGTTCGACGAATTGCCCCCGCAGCTCCGCACGCGC CAGGCGCTCACTTCCCTGGTCTCCTCGCTCTCGGCTGAGGGCTGGCCCTCGCACGCGGAA GGCGCTGTCAAGAAGGTCGCTAATGAGATCTTCCCGGATGATAACATCTGCACTCTGTTG GTATCTGGCTATGCCAATGCTGGGAAGCTTGACCATGCTCTGAGGTTGATCGGTGAGACG CGCCGTGGTGGGTTTCAGCCAGGGTTGGACGCCTACAACGCGGTTCTTGATTGTATCTGC CGGCTATGTCGCAAGAAGGACCCGTTGAGGATGCCTGCGGAGGCAGAGAAGTTCTTAGTT GACATGGAGGCCAATGGCATTCCCCGCGATGCAGGTACTTTCCGGGTTCTGATCACTAAT CTTTGCAAGATTCGCAAGACTGAGGATGCAATGAATCTGTTCCGGCGAATGGGTGAGTGG GGATGCTCACCAGATGCCGACACCTACTTGGTGCTTATTAAGAGCTTGTATCAGGCTGCC CGGATTTCTGAAGGGGATGAGATGATGACATGGATGCGGTCTGCAGGGTTTGGTGCTAAG CTTGATAGAAAGGCATATTATGGGTTCATCAAGATTTTATGTGGCATTGAAAGGGTTGAG CATGCTGTCAAGGTGTTCAGGATGATGAAAGGATATGGACATGCACCTGGGACAAAGTCA TATAGCTTGCTGATTGAGAAGCTGACTAGGCATAACTTAGGAGATCGTGCTAATGCACTG TTCAGGGAAGCAGTGGCACGTGGTGTGACTGTGACGCCAGGAGTGTATAAGATTGATAAG AAGTATGTGAAGGCGAAGAAGGAGAAGAAGGTAAAGAAGAGGCTGACTTTACCAGAGAAG ATGAGATTGAAGAGCAAGAGGCTGTACAAGCTTAGAATGAGCTTTGTTAAGAAGCCTAAG CGTCGAATGGTCCGGGTTTGA

Peptide Sequence

PEP ID	Os07t0603900-01
PEP Infomation	pep chromosome:IRGSP-1.0:7:24724562:24728092:1 gene:Os07g0603900 transcript:Os07t0603900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0603900-01)
Sequence	MWRRHLLRRLLPSPATAAAAAASPSPAIRLLSTASPDPAPPATLASSLAGALSALSSTPP PATSPDAYFSLHFSDVRPTNALLAEALALAPPATSRAAAELFRFLVRRRSLHPSDSALAP VVRHLARRRDFPAVRSLVQEFPSALGHDTLDAYLLSLARAGRATDAVKVFDELPPQLRTR QALTSLVSSLSAEGWPSHAEGAVKKVANEIFPDDNICTLLVSGYANAGKLDHALRLIGET RRGGFQPGLDAYNAVLDCICRLCRKKDPLRMPAEAEKFLVDMEANGIPRDAGTFRVLITN LCKIRKTEDAMNLFRRMGEWGCSPDADTYLVLIKSLYQAARISEGDEMMTWMRSAGFGAK LDRKAYYGFIKILCGIERVEHAVKVFRMMKGYGHAPGTKSYSLLIEKLTRHNLGDRANAL FREAVARGVTVTPGVYKIDKKYVKAKKEKKVKKRLTLPEKMRLKSKRLYKLRMSFVKKPK RRMVRV

Transcript Sequence

Transcript ID	Os07t0603900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:7:24724562:24728092:1 gene:Os07g0603900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os07t0603900-01)
Sequence	AAAACCCTCACTCCCCCTTCGCGATCTCCTCCGCTCCAAAATGTGGCGCCGCCACCTCCT CCGCCGCCTCCTGCCGTCTCCGGCCACCGCCGCCGCCGCCGCCGCCTCCCCCTCGCCGGC GATCCGCCTCCTATCCACCGCCTCCCCGGATCCCGCCCCGCCGGCGACGCTCGCCTCCTC CCTCGCCGGGGCGCTCTCCGCGCTGTCCTCCACCCCGCCACCGGCCACCTCCCCGGACGC CTACTTCTCCCTCCACTTCTCCGACGTGCGCCCCACCAACGCGCTGCTCGCCGAGGCGCT CGCGCTCGCCCCGCCGGCCACGTCCCGCGCCGCCGCGGAGCTCTTCCGCTTCCTCGTCCG CCGCCGCTCGCTCCACCCCTCCGACTCCGCGCTCGCGCCCGTCGTGCGGCATCTCGCCCG CCGCCGCGACTTCCCCGCGGTGCGCTCGCTCGTCCAGGAGTTCCCCTCCGCGCTGGGGCA CGACACGCTCGACGCGTACCTCCTCAGCCTCGCCAGGGCCGGCCGCGCCACCGACGCGGT CAAGGTGTTCGACGAATTGCCCCCGCAGCTCCGCACGCGCCAGGCGCTCACTTCCCTGGT CTCCTCGCTCTCGGCTGAGGGCTGGCCCTCGCACGCGGAAGGCGCTGTCAAGAAGGTCGC TAATGAGATCTTCCCGGATGATAACATCTGCACTCTGTTGGTATCTGGCTATGCCAATGC TGGGAAGCTTGACCATGCTCTGAGGTTGATCGGTGAGACGCGCCGTGGTGGGTTTCAGCC AGGGTTGGACGCCTACAACGCGGTTCTTGATTGTATCTGCCGGCTATGTCGCAAGAAGGA CCCGTTGAGGATGCCTGCGGAGGCAGAGAAGTTCTTAGTTGACATGGAGGCCAATGGCAT TCCCCGCGATGCAGGTACTTTCCGGGTTCTGATCACTAATCTTTGCAAGATTCGCAAGAC TGAGGATGCAATGAATCTGTTCCGGCGAATGGGTGAGTGGGGATGCTCACCAGATGCCGA CACCTACTTGGTGCTTATTAAGAGCTTGTATCAGGCTGCCCGGATTTCTGAAGGGGATGA GATGATGACATGGATGCGGTCTGCAGGGTTTGGTGCTAAGCTTGATAGAAAGGCATATTA TGGGTTCATCAAGATTTTATGTGGCATTGAAAGGGTTGAGCATGCTGTCAAGGTGTTCAG GATGATGAAAGGATATGGACATGCACCTGGGACAAAGTCATATAGCTTGCTGATTGAGAA GCTGACTAGGCATAACTTAGGAGATCGTGCTAATGCACTGTTCAGGGAAGCAGTGGCACG TGGTGTGACTGTGACGCCAGGAGTGTATAAGATTGATAAGAAGTATGTGAAGGCGAAGAA GGAGAAGAAGGTAAAGAAGAGGCTGACTTTACCAGAGAAGATGAGATTGAAGAGCAAGAG GCTGTACAAGCTTAGAATGAGCTTTGTTAAGAAGCCTAAGCGTCGAATGGTCCGGGTTTG AGCAGGCTTTGGGTTGGAGCGGATGATCATGGGAAGAGAGAATCAGAAAGAGGCCATTTA TAATTTTGAAGAGCAGTAAATTGTCGTCCTTCAATTTTCCCCACATTACAAGTGGCTCAC TGACCGCAACATTTTTCTGATCGGAGTCCTTCGTGTGGTTTCTATCTCTTGGACAATGGA TTGCTGACACTTTGCTGTGCTGTTTTATGTTCTCTGCAATGCCTTGTGTTTCATTAACAC AAATAATGAATGTATCATTTTACTTAAGTTTATGTTCACCACAGTTGAGAGGAAACTTTT GGTATATGATGAAGCAACTGTCTTGCAGATCCGTAGTTATCGTTTGAGCAATGTTTTGTA CACTCTAGTTTCTCATGAACTCATGAAATATTTTAT