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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0603600-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:24699857:24703643:1 gene:Os07g0603600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to esterase PIR7B. (Os07t0603600-01)
Sequence

GCCGACCCGGAGCTCCACCCGCAGCAGCTTCTCGCCAAGGATTTGAACACTAAAGATCTT
GAAACCAACATCATTGTTCTTGTTCATGGAGGAGGTTTTGGTGCTTGGTGTTGGTACAAG
ACTATAGCACTTCTTGAGGATAGTGGGTTCAGAGTCAATGCTATTGACTTAACAGGTTCC
GGGATTCATTCGTATGATACAAACAAGATTAGCAGTCTCACGCAGTATGCTGAGCCGCTT
ACATCTTACCTTAAAAGCCTAGGTGACAACGAAAAGGTGATTTTGGTTGGACATGATTTT
GGCGGTGCTTGTATATCCTACGCAATGGAGATGTTTCCATCAAAAGTTGCGAAGGCTGTT
TTCCTTTGTGCAGCAATGCTGAAAAATGGGCATAGTACTCTTGATATGTTTCAACAACAG
ATGGATACAAATGGTACACTCCAAAGGGCGCAGGAATTTGTATATTCCAATGGCAAGGAG
CAGCCTCCCACCGCTATCAATATAGAGAAGTCTTTACTGAAACATTTGTTGTTCAACCAA
AGCCCCTCTAAGGATGTATCTTTGGCTTCAGTGTCCATGAGACCTATCCCCTTTGCTCCT
GTGCTGGAGAAGCTGGTCCTAACAGAAGAGAAGTACGGATCGGTGCGGCGATTCTACGTC
GAAACCACAGAAGACAATGCCATTCCACTTCATCTTCAGCAAGGTATGTGCGACATGAAC
CCGCCCGAGAAGGTTCTTCGGTTGAAAGGCTCGGATCATGCCCCATTCTTCTCCAAGCCA
CAAGCTCTGCACAAGACCCTTGTAGAGATAGCAACCATGCCACCAGTCAAGGCATCATGA

Peptide Sequence

PEP ID

Os07t0603600-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:24699857:24703643:1 gene:Os07g0603600 transcript:Os07t0603600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to esterase PIR7B. (Os07t0603600-01)
Sequence

ADPELHPQQLLAKDLNTKDLETNIIVLVHGGGFGAWCWYKTIALLEDSGFRVNAIDLTGS
GIHSYDTNKISSLTQYAEPLTSYLKSLGDNEKVILVGHDFGGACISYAMEMFPSKVAKAV
FLCAAMLKNGHSTLDMFQQQMDTNGTLQRAQEFVYSNGKEQPPTAINIEKSLLKHLLFNQ
SPSKDVSLASVSMRPIPFAPVLEKLVLTEEKYGSVRRFYVETTEDNAIPLHLQQGMCDMN
PPEKVLRLKGSDHAPFFSKPQALHKTLVEIATMPPVKAS

Transcript Sequence

Transcript ID

Os07t0603600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:24699857:24703643:1 gene:Os07g0603600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to esterase PIR7B. (Os07t0603600-01)
Sequence

CGCCGACCCGGAGCTCCACCCGCAGCAGCTTCTCGCCAAGGATTTGAACACTAAAGATCT
TGAAACCAACATCATTGTTCTTGTTCATGGAGGAGGTTTTGGTGCTTGGTGTTGGTACAA
GACTATAGCACTTCTTGAGGATAGTGGGTTCAGAGTCAATGCTATTGACTTAACAGGTTC
CGGGATTCATTCGTATGATACAAACAAGATTAGCAGTCTCACGCAGTATGCTGAGCCGCT
TACATCTTACCTTAAAAGCCTAGGTGACAACGAAAAGGTGATTTTGGTTGGACATGATTT
TGGCGGTGCTTGTATATCCTACGCAATGGAGATGTTTCCATCAAAAGTTGCGAAGGCTGT
TTTCCTTTGTGCAGCAATGCTGAAAAATGGGCATAGTACTCTTGATATGTTTCAACAACA
GATGGATACAAATGGTACACTCCAAAGGGCGCAGGAATTTGTATATTCCAATGGCAAGGA
GCAGCCTCCCACCGCTATCAATATAGAGAAGTCTTTACTGAAACATTTGTTGTTCAACCA
AAGCCCCTCTAAGGATGTATCTTTGGCTTCAGTGTCCATGAGACCTATCCCCTTTGCTCC
TGTGCTGGAGAAGCTGGTCCTAACAGAAGAGAAGTACGGATCGGTGCGGCGATTCTACGT
CGAAACCACAGAAGACAATGCCATTCCACTTCATCTTCAGCAAGGTATGTGCGACATGAA
CCCGCCCGAGAAGGTTCTTCGGTTGAAAGGCTCGGATCATGCCCCATTCTTCTCCAAGCC
ACAAGCTCTGCACAAGACCCTTGTAGAGATAGCAACCATGCCACCAGTCAAGGCATCATG
AGAGCTGGGGTTTCTCCCTTCAGGTTTCAAGGCTGGTGACTGGCTGATTGCCATTGTTGT
GCAGTTGCTTCTTGTATGTAATATGTTGAGAATGGGGGTGTAATGCTTGAGCCAAGATGT
TATGGCTTGGAGGTCGTTTATACAGGATGTTTGTCACAGAGGCTCACTGCGTAGCAGCAG
AGTAGGGGAGCTCTGATTTTCTATACATGGTGAATCACATCCTCCCAGTGCAGACTGACC
TGGAGAAATTGCT