Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0603100-01
CDS Infomation

cds chromosome:IRGSP-1.0:7:24654907:24659846:-1 gene:Os07g0603100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os07t0603100-01)
Sequence

ATGGCTATGCAAGTTGGGGAATCAGTTGCTCCTTTAAGTCCACAAATGATTGGAAATGCG
TTTGTTCAACAATACTACAATGTTCTCCATAGTTCACCGGGTCAAGTTTGTAAGTTCTAT
CATGATTCAAGCACCCTTGGTCGACCAGATTCTAATGGAACCATGACATCTGTAACCACA
TTGACTGCTATCAACGATGAATTTCTCTCTACGGACTTCAGTAGCTGTTTGATTAAGTTA
GAGAATGTGGATGCACAGTTATCCCTCAATGGTGGTGTGCACATTTTGGTAACTGGATCT
ATTGGACACAATGGCACTATGAGGCATAGATTTAGCCAGTCATTCTTCCTTGCTCCACAA
GAAAGCGGAGGCTATTTTGTTCTGAATGATATGCTAAGATATGATTCTCTGCAAGAAACA
CTGTTGACTGAGACAAATGATTCTCCACAAGAAAGACTGTTGACTGAGATAAATGATTCT
CTGCCTAACCATGTTGATGATAACACTCACAGTGTCACATTTACATCTGAGCCAGAGACT
TCAGGCAATGTCAATGAGACTGCAGACTTGGAGCTTCCATCTGCAGAGAATGTCAATGAC
AATGTTGAGAATCTGCCTGCCAATGACAGTTCTCCCGAAGAAAATGTTCTTGTTGAGGCA
TGCACGGAAGTGGTTAGTTCGTGTGCAGAGAACATTCCTGCAGCTGCACCTGCACCTGCT
CCTCGTGCCTCGACTCAGAAGGATGTTACTAAACAGTCATATGCATCAGTTGTTAAGGTT
ACAAAGGAGGGCACACCAACTCCACCTGTTGCAAAGCCCAAGCCCAAACCCAAACCAAAG
CCAACTGCAAAAGTGACTGACAATGTGGAGAAAGCTGTGTCCTCACCTGTGAAACCTACT
AATGCAGCTGATACCACATCTCCAAATGACAAAAATGTTCTTGTTGAGCAAGGGTATTCT
GTTTATGTAAAGCACTTACCTTATGAATGTACCACGAAAGATGTTGAGGAAAAGTTCAGG
AAATTTGGTGCTATCAGGCCTGGTGGTATTCAAGTTCGACACCGTCAGCCCGATGGATTC
TGCTTTGGCTTTGTTGAATTTGAGTCTCGGCAATCCATGCTAGCAGCAATTGAGGCCTCT
CCAGTTTCTATTGGCTCAAAAGCATCCATTGTTGAGGAGAAACGAACTACAACTCGAGTT
GTTAATGGTGTCACCCATATTGAAAACAATGGCAATGCTCGGGGTGGTCGGTTCCAGCAA
GACAACAGAGGTGGTGGATACCGTGGGGACAACTTCAGGGGACGAGAAGCAGGTTTCGTG
AACAATGGTAACTACCGTGATGGTGATAACATGAGGAACGGATTCAGAAATCAGAACGAG
TACTCAGGGCGTGGTCGTGGGCCTCAGGGGAATGGTTACCATCAGAATGGTAACGGTGGT
GGTTACCATCAGAATGGAAATGGATACCATCAGAACGGTGATGGATACCATCAGAATGGG
AACAGATACAATCAGAACGGGAACAGATACCATCAGAACGGAGATGAGTACTATCAGAAC
GGCAATGGCAATGGACATCGGCAGAATGGGTCTGGATACTATCATCAGAATGGGAATGGC
TATCGTCAGGACCGCATCTTCCACAATGGGAATGGAAATGGGCGGCCTGCTCGCTTCAAT
GGACCCAGGCAAACACCGGTTCAAGCGTAG

Peptide Sequence

PEP ID

Os07t0603100-01
PEP Infomation

pep chromosome:IRGSP-1.0:7:24654907:24659846:-1 gene:Os07g0603100 transcript:Os07t0603100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os07t0603100-01)
Sequence

MAMQVGESVAPLSPQMIGNAFVQQYYNVLHSSPGQVCKFYHDSSTLGRPDSNGTMTSVTT
LTAINDEFLSTDFSSCLIKLENVDAQLSLNGGVHILVTGSIGHNGTMRHRFSQSFFLAPQ
ESGGYFVLNDMLRYDSLQETLLTETNDSPQERLLTEINDSLPNHVDDNTHSVTFTSEPET
SGNVNETADLELPSAENVNDNVENLPANDSSPEENVLVEACTEVVSSCAENIPAAAPAPA
PRASTQKDVTKQSYASVVKVTKEGTPTPPVAKPKPKPKPKPTAKVTDNVEKAVSSPVKPT
NAADTTSPNDKNVLVEQGYSVYVKHLPYECTTKDVEEKFRKFGAIRPGGIQVRHRQPDGF
CFGFVEFESRQSMLAAIEASPVSIGSKASIVEEKRTTTRVVNGVTHIENNGNARGGRFQQ
DNRGGGYRGDNFRGREAGFVNNGNYRDGDNMRNGFRNQNEYSGRGRGPQGNGYHQNGNGG
GYHQNGNGYHQNGDGYHQNGNRYNQNGNRYHQNGDEYYQNGNGNGHRQNGSGYYHQNGNG
YRQDRIFHNGNGNGRPARFNGPRQTPVQA

Transcript Sequence

Transcript ID

Os07t0603100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:24654907:24659846:-1 gene:Os07g0603100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os07t0603100-01)
Sequence

CTCCTCTCTCCGTCTCGCTTCGGTTCCTTCCTCGAGTCGAAACCTCGCGAAGCCGCCGCC
GCCGCCGCCGACTCTCGCTAGGGCTAGGGTTTTCCTCCCGCCGCCGGGAGCCCCTCCCCC
TGCAACCGCGCAAGGGATGGCTATGCAAGTTGGGGAATCAGTTGCTCCTTTAAGTCCACA
AATGATTGGAAATGCGTTTGTTCAACAATACTACAATGTTCTCCATAGTTCACCGGGTCA
AGTTTGTAAGTTCTATCATGATTCAAGCACCCTTGGTCGACCAGATTCTAATGGAACCAT
GACATCTGTAACCACATTGACTGCTATCAACGATGAATTTCTCTCTACGGACTTCAGTAG
CTGTTTGATTAAGTTAGAGAATGTGGATGCACAGTTATCCCTCAATGGTGGTGTGCACAT
TTTGGTAACTGGATCTATTGGACACAATGGCACTATGAGGCATAGATTTAGCCAGTCATT
CTTCCTTGCTCCACAAGAAAGCGGAGGCTATTTTGTTCTGAATGATATGCTAAGATATGA
TTCTCTGCAAGAAACACTGTTGACTGAGACAAATGATTCTCCACAAGAAAGACTGTTGAC
TGAGATAAATGATTCTCTGCCTAACCATGTTGATGATAACACTCACAGTGTCACATTTAC
ATCTGAGCCAGAGACTTCAGGCAATGTCAATGAGACTGCAGACTTGGAGCTTCCATCTGC
AGAGAATGTCAATGACAATGTTGAGAATCTGCCTGCCAATGACAGTTCTCCCGAAGAAAA
TGTTCTTGTTGAGGCATGCACGGAAGTGGTTAGTTCGTGTGCAGAGAACATTCCTGCAGC
TGCACCTGCACCTGCTCCTCGTGCCTCGACTCAGAAGGATGTTACTAAACAGTCATATGC
ATCAGTTGTTAAGGTTACAAAGGAGGGCACACCAACTCCACCTGTTGCAAAGCCCAAGCC
CAAACCCAAACCAAAGCCAACTGCAAAAGTGACTGACAATGTGGAGAAAGCTGTGTCCTC
ACCTGTGAAACCTACTAATGCAGCTGATACCACATCTCCAAATGACAAAAATGTTCTTGT
TGAGCAAGGGTATTCTGTTTATGTAAAGCACTTACCTTATGAATGTACCACGAAAGATGT
TGAGGAAAAGTTCAGGAAATTTGGTGCTATCAGGCCTGGTGGTATTCAAGTTCGACACCG
TCAGCCCGATGGATTCTGCTTTGGCTTTGTTGAATTTGAGTCTCGGCAATCCATGCTAGC
AGCAATTGAGGCCTCTCCAGTTTCTATTGGCTCAAAAGCATCCATTGTTGAGGAGAAACG
AACTACAACTCGAGTTGTTAATGGTGTCACCCATATTGAAAACAATGGCAATGCTCGGGG
TGGTCGGTTCCAGCAAGACAACAGAGGTGGTGGATACCGTGGGGACAACTTCAGGGGACG
AGAAGCAGGTTTCGTGAACAATGGTAACTACCGTGATGGTGATAACATGAGGAACGGATT
CAGAAATCAGAACGAGTACTCAGGGCGTGGTCGTGGGCCTCAGGGGAATGGTTACCATCA
GAATGGTAACGGTGGTGGTTACCATCAGAATGGAAATGGATACCATCAGAACGGTGATGG
ATACCATCAGAATGGGAACAGATACAATCAGAACGGGAACAGATACCATCAGAACGGAGA
TGAGTACTATCAGAACGGCAATGGCAATGGACATCGGCAGAATGGGTCTGGATACTATCA
TCAGAATGGGAATGGCTATCGTCAGGACCGCATCTTCCACAATGGGAATGGAAATGGGCG
GCCTGCTCGCTTCAATGGACCCAGGCAAACACCGGTTCAAGCGTAGGCGTTTCTTGAATA
TCCAAAAAATCCTTTTGTCAATCCTAGGATCGCCTTATTTATCTGTGTTCTTTTGCACCC
CATTCGGCTGCGACAAAGTTCAGTCCCAGCCCTTCGTTTTGCCTCGATGCTTTTGCTGAC
TAGTTGGCATGTTCTGGATGTACTTGGTGAGACCAGGAAGTGTAATTTTGGAAAGGTTGG
GAGCTTACTGCAAGGTTCGTGACTTCATGTCGAGACATGCTATCTAATATATGCATTAGT
ATTTATGGCACGCAGATGGATGAAGGATCTGTTGTGTGCTTTTCCTTATG