Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

CDS Sequence

CDS ID

Os07t0602200-01

CDS Infomation

cds chromosome:IRGSP-1.0:7:24592035:24598353:1 gene:Os07g0602200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HDA1. (Os07t0602200-01)

Sequence

ATGGCGGCGGCGACGACCGCCGCGGCGGCGGCGAGGGTGGGGCTGCTGTACGACGAGAGG
ATGTGCGCGCACGCGACGCCCGACGGGGAGGAGCACCCGGAGAACCCCGAGAGGCTGCGG
GCCATCTGGCGCAAGCTCTCCGCCGACGGCGTCGCCTCCAGGTGCATGATCATGAAAGCG
AAGGAAGCTGAGGACAAGTATATAGCTTCTGTCCATAGCCAGAACCATATCAAGCTGATG
AGGAGTATCAGCTCAAAAGAATATGATTCCCGTCGAAACAAGATTGCTAGAAAATTTAAT
TCCATTTACTTCAACAAGGGCTCCTCAGAGTCTGCTTTTCTTGCAGCTGGTTCTGTGATT
GAGGTAGCTGAGAAGGTTGCTGCAGGAGAGTTAAGTTCTGCTATTGCTCTAGTCCGACCT
CCAGGTCACCATGCTGAACATAATGAGGCAATGGGTTTTTGCCTCTTCAACAATGTAGCA
ATTGCTGCTGATTATCTCTTAAATGAGAGGACTGACTTAGGTATCAAGAAGATATTGATT
GTCGATTGGGATGTTCATCATGGAAATGGCACACAAAAGATGTTTTATAGTGATCCTCGT
GTATTGTTCTTTTCAGTTCACAGATTTGATTATGGCAGCTTCTATCCTGCTGAAGGGGAT
GCATCTTACTGTTTCATTGGGGAAGGAGATGGTAAAGGGTACAACATTAACGTGCCCTGG
GAACATGGAAAATGTGGTGATGCAGATTATATTGCTGCATGGGACCATGTACTACTTCCT
GTTGCTGAAGCATTTAACCCTGATATAGTCTTGGTGTCTGCTGGGTTTGATGCAGCACTG
GGTGATCCTCTTGGTGGCTGCTGCATCACTCCCAATGGATATGCTCTGCTACTGACAAAG
CTCTTAGGTTTTGCCCAAGGGAGGATAGTGATGGCTCTTGAAGGAGGCTATAACCTTAGA
TCCATAGCAAATTCAGTTAGTGCTTGTGCTAAAGTTTTGTTGGGAGACAAGTTCAGATTT
GACACTCCTGATATGCAACCGTTTGAATCTTCATGGAGAGTTATACAAGCGGTACGTGAT
GAATTGAAGACGTTCTGGCCTGTTCTGAGTAATAGATTGCCAGAGAATATATCATTGAGG
AGTAGGCCCTCACAAATTGAGCTGTATTCTTCTGGTTCTGACTCTGAAGTTGAAGATCTC
CCTGATGCTATTGCTTCTGTCAATATTATTCAAATTACTTATGGTATTATAAGTGAAAGC
CTCTCAAAGTTGAACCTTGATGAAGACAAAATCGCAACAAAGACCACCTCAAGTAATGTA
ATGGTTGAAGGTCCAACTGATTCAGTTGAACCACAAAATGATGGATCTGCTGCGGTGTCA
ACTGAAGGAATATCATCTCTATCTTCTACTTGGAGATCAGAACTGTCAAAAGTATATGTT
TGGTATGCCAGCTTTGGTTCAAACATGTGGACACCAAGGTTTCTGTGCTACATCCAAGGG
GGAAAGGCTGAGGGTATGAATATACCATGTTTTGGATCTCATGACACAAGCCCACCAAGA
GGTTCCATGTGGAAGACTGTGCCTCATAGATTGTTTTTTGGTAGATCCTCTACTCCTTGC
TGGGGAACTGGTGGTGTTGCTTTTCTCAACCCTGAGATAAACCACACTGAGAACTCCTAT
GTCTGCATGTATAAAATAACGCTCGAGCAGTTCAATGATGTATTGTTTCAAGAGAATCGT
TTAGTGAAGGAGAACGGCGAAAGTGGAAAAACTGAGTCTCCTGACTCTCCTTTGATTGGC
TTGTCTGAAATAGAGTTTGTTTCCAGAAACAAGGGTGTCCACCTTGCACCTATTAAGGAT
AGCTGGTACTCCAATGTACTTTACCTTGGGGAGGAGGATAACCTTCCAATTCTTACAATG
ACATGCCCGTCATCAGACGTAGAGCGATGCAGATCCGGAGAGCTGCCATTGTGTCCTCCA
TCCAAGACCTACTCCGCCACCCTGATAAGGGGACTAATGGAAGGGAAGCACCTGGATGCA
GATGCGGCCGCTAGTTACATCAACACTGCAGCTACCAGAGGCCTGTGA

Peptide Sequence

PEP ID

Os07t0602200-01

PEP Infomation

pep chromosome:IRGSP-1.0:7:24592035:24598353:1 gene:Os07g0602200 transcript:Os07t0602200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HDA1. (Os07t0602200-01)

Sequence

MAAATTAAAAARVGLLYDERMCAHATPDGEEHPENPERLRAIWRKLSADGVASRCMIMKA
KEAEDKYIASVHSQNHIKLMRSISSKEYDSRRNKIARKFNSIYFNKGSSESAFLAAGSVI
EVAEKVAAGELSSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTDLGIKKILI
VDWDVHHGNGTQKMFYSDPRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPW
EHGKCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPNGYALLLTK
LLGFAQGRIVMALEGGYNLRSIANSVSACAKVLLGDKFRFDTPDMQPFESSWRVIQAVRD
ELKTFWPVLSNRLPENISLRSRPSQIELYSSGSDSEVEDLPDAIASVNIIQITYGIISES
LSKLNLDEDKIATKTTSSNVMVEGPTDSVEPQNDGSAAVSTEGISSLSSTWRSELSKVYV
WYASFGSNMWTPRFLCYIQGGKAEGMNIPCFGSHDTSPPRGSMWKTVPHRLFFGRSSTPC
WGTGGVAFLNPEINHTENSYVCMYKITLEQFNDVLFQENRLVKENGESGKTESPDSPLIG
LSEIEFVSRNKGVHLAPIKDSWYSNVLYLGEEDNLPILTMTCPSSDVERCRSGELPLCPP
SKTYSATLIRGLMEGKHLDADAAASYINTAATRGL

Transcript Sequence

Transcript ID

Os07t0602200-01

Transcript Infomation

cdna chromosome:IRGSP-1.0:7:24592035:24598353:1 gene:Os07g0602200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HDA1. (Os07t0602200-01)

Sequence

TCCATTTCCGAATCGTCGTCTCGCCTCCACTTCCGACTTCCGAGTCGTCTCGCCTCGCCG
GCGCAGGATGGCGGCGGCGACGACCGCCGCGGCGGCGGCGAGGGTGGGGCTGCTGTACGA
CGAGAGGATGTGCGCGCACGCGACGCCCGACGGGGAGGAGCACCCGGAGAACCCCGAGAG
GCTGCGGGCCATCTGGCGCAAGCTCTCCGCCGACGGCGTCGCCTCCAGGTGCATGATCAT
GAAAGCGAAGGAAGCTGAGGACAAGTATATAGCTTCTGTCCATAGCCAGAACCATATCAA
GCTGATGAGGAGTATCAGCTCAAAAGAATATGATTCCCGTCGAAACAAGATTGCTAGAAA
ATTTAATTCCATTTACTTCAACAAGGGCTCCTCAGAGTCTGCTTTTCTTGCAGCTGGTTC
TGTGATTGAGGTAGCTGAGAAGGTTGCTGCAGGAGAGTTAAGTTCTGCTATTGCTCTAGT
CCGACCTCCAGGTCACCATGCTGAACATAATGAGGCAATGGGTTTTTGCCTCTTCAACAA
TGTAGCAATTGCTGCTGATTATCTCTTAAATGAGAGGACTGACTTAGGTATCAAGAAGAT
ATTGATTGTCGATTGGGATGTTCATCATGGAAATGGCACACAAAAGATGTTTTATAGTGA
TCCTCGTGTATTGTTCTTTTCAGTTCACAGATTTGATTATGGCAGCTTCTATCCTGCTGA
AGGGGATGCATCTTACTGTTTCATTGGGGAAGGAGATGGTAAAGGGTACAACATTAACGT
GCCCTGGGAACATGGAAAATGTGGTGATGCAGATTATATTGCTGCATGGGACCATGTACT
ACTTCCTGTTGCTGAAGCATTTAACCCTGATATAGTCTTGGTGTCTGCTGGGTTTGATGC
AGCACTGGGTGATCCTCTTGGTGGCTGCTGCATCACTCCCAATGGATATGCTCTGCTACT
GACAAAGCTCTTAGGTTTTGCCCAAGGGAGGATAGTGATGGCTCTTGAAGGAGGCTATAA
CCTTAGATCCATAGCAAATTCAGTTAGTGCTTGTGCTAAAGTTTTGTTGGGAGACAAGTT
CAGATTTGACACTCCTGATATGCAACCGTTTGAATCTTCATGGAGAGTTATACAAGCGGT
ACGTGATGAATTGAAGACGTTCTGGCCTGTTCTGAGTAATAGATTGCCAGAGAATATATC
ATTGAGGAGTAGGCCCTCACAAATTGAGCTGTATTCTTCTGGTTCTGACTCTGAAGTTGA
AGATCTCCCTGATGCTATTGCTTCTGTCAATATTATTCAAATTACTTATGGTATTATAAG
TGAAAGCCTCTCAAAGTTGAACCTTGATGAAGACAAAATCGCAACAAAGACCACCTCAAG
TAATGTAATGGTTGAAGGTCCAACTGATTCAGTTGAACCACAAAATGATGGATCTGCTGC
GGTGTCAACTGAAGGAATATCATCTCTATCTTCTACTTGGAGATCAGAACTGTCAAAAGT
ATATGTTTGGTATGCCAGCTTTGGTTCAAACATGTGGACACCAAGGTTTCTGTGCTACAT
CCAAGGGGGAAAGGCTGAGGGTATGAATATACCATGTTTTGGATCTCATGACACAAGCCC
ACCAAGAGGTTCCATGTGGAAGACTGTGCCTCATAGATTGTTTTTTGGTAGATCCTCTAC
TCCTTGCTGGGGAACTGGTGGTGTTGCTTTTCTCAACCCTGAGATAAACCACACTGAGAA
CTCCTATGTCTGCATGTATAAAATAACGCTCGAGCAGTTCAATGATGTATTGTTTCAAGA
GAATCGTTTAGTGAAGGAGAACGGCGAAAGTGGAAAAACTGAGTCTCCTGACTCTCCTTT
GATTGGCTTGTCTGAAATAGAGTTTGTTTCCAGAAACAAGGGTGTCCACCTTGCACCTAT
TAAGGATAGCTGGTACTCCAATGTACTTTACCTTGGGGAGGAGGATAACCTTCCAATTCT
TACAATGACATGCCCGTCATCAGACGTAGAGCGATGCAGATCCGGAGAGCTGCCATTGTG
TCCTCCATCCAAGACCTACTCCGCCACCCTGATAAGGGGACTAATGGAAGGGAAGCACCT
GGATGCAGATGCGGCCGCTAGTTACATCAACACTGCAGCTACCAGAGGCCTGTGAAGGCT
GCTTCCCTATGCATTATGGTTTGTAGTTTTGCACTAAGCATGTAAGTGGCTAACCCACGA
ATCCACTTATTTTCACTTATAAGTGGGTTTGCAGATTAGCCACTTACGCGCTTAGTTTGT
ACAGCCAGTAGGAGCGTACTAGGACTGTAGGAGGAATGATGAGTAGGTTTGCAGGACTGT
AAAGATAGTGCGTTGATCATTCAGGACCACGGGGGCTTATGTAGAGGCCTCGTGAATGTC
CTGCCAATTGGGGAATCTGGACCCGATCAAGTTTCCCTAGGATTGTTAAGAATCTAGCTA
GCGCTTGTACCCTGGGTTGGTCATTGTCTCATTGGTGCTCTCCGGATTGGTTTGTTTTGG
GGTGGAAAAAAAAACACTAGTCGATGTTGCCTGGTTTTTCATGCTGTTACCTGGCGAGGA
AATGACGATTTCTTGTG