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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os07t0600700-02
CDS Infomation

cds chromosome:IRGSP-1.0:7:24505275:24508630:1 gene:Os07g0600700 gene_biotype:protein_coding transcript_biotype:protein_coding description:X8 domain containing protein. (Os07t0600700-01);X8 domain containing protein. (Os07t0600700-02)
Sequence

ATGGAGGCGGTGGTGGTGGCGGCGCTGGTGCTTCTCATGTCGTCCAGTCTCGTCGCTTCA
GATTGGTGCGTGTGCAGGTCGGATCAGCCACAGGCGGCGCTGCAGAAGACCATCGACTAC
GCGTGCGGCGCGGGCGCGGACTGCAACTCCATCCACGAGCAGGGGCAGTGCTTCAACCCC
AACACCGTGGTGGCGCACTGCTCCTGGGCCGCCAACAGCTACTTCCAGAGGAACAGGGCC
ATGGGCGCCACCTGCGACTTCACCGGCACCGCCACCCTCACCACCAGCGACCCAAGTGTT
TCTGGCTGCTCCTTCCCTGCTAGTGCAAGTGGTGCTGGAACATCAACCACTCCGACCATG
GGAGGCACAACTGGAACAATGACCCCAGGAACCTTCACACCTGGAACTGGTATGGGCACA
ACCACCGGCACCGGCATGGGAACAGGGACTACTACCGGCACCGGGCTGGGCGGGCTAGGG
CCAACAGGCACAAGCAGCATGGACACCGCGGCAGCGGGATTGCACCTAAGAGCCGGGCTA
GCCACCTTCTGCACCGTGCTCCTCTCGTTCGTTGCGATCGCATGA

Peptide Sequence

PEP ID

Os07t0600700-02
PEP Infomation

pep chromosome:IRGSP-1.0:7:24505275:24508630:1 gene:Os07g0600700 transcript:Os07t0600700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:X8 domain containing protein. (Os07t0600700-01);X8 domain containing protein. (Os07t0600700-02)
Sequence

MEAVVVAALVLLMSSSLVASDWCVCRSDQPQAALQKTIDYACGAGADCNSIHEQGQCFNP
NTVVAHCSWAANSYFQRNRAMGATCDFTGTATLTTSDPSVSGCSFPASASGAGTSTTPTM
GGTTGTMTPGTFTPGTGMGTTTGTGMGTGTTTGTGLGGLGPTGTSSMDTAAAGLHLRAGL
ATFCTVLLSFVAIA

Transcript Sequence

Transcript ID

Os07t0600700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:7:24505275:24508630:1 gene:Os07g0600700 gene_biotype:protein_coding transcript_biotype:protein_coding description:X8 domain containing protein. (Os07t0600700-01);X8 domain containing protein. (Os07t0600700-02)
Sequence

CTCTCACTCACTCACTCTCCTCTACTAGCTCGTCTCCATCTCTTCTACTCGTCCAGGCCT
CCAAGAATCTCTCTGTTCTTGCTGCTTGCTTGGTGGTGGTGGTAGCTTTCATAATGGAGG
CGGTGGTGGTGGCGGCGCTGGTGCTTCTCATGTCGTCCAGTCTCGTCGCTTCAGATTGGT
GCGTGTGCAGGTCGGATCAGCCACAGGCGGCGCTGCAGAAGACCATCGACTACGCGTGCG
GCGCGGGCGCGGACTGCAACTCCATCCACGAGCAGGGGCAGTGCTTCAACCCCAACACCG
TGGTGGCGCACTGCTCCTGGGCCGCCAACAGCTACTTCCAGAGGAACAGGGCCATGGGCG
CCACCTGCGACTTCACCGGCACCGCCACCCTCACCACCAGCGACCCAAGTGTTTCTGGCT
GCTCCTTCCCTGCTAGTGCAAGTGGTGCTGGAACATCAACCACTCCGACCATGGGAGGCA
CAACTGGAACAATGACCCCAGGAACCTTCACACCTGGAACTGGTATGGGCACAACCACCG
GCACCGGCATGGGAACAGGGACTACTACCGGCACCGGGCTGGGCGGGCTAGGGCCAACAG
GCACAAGCAGCATGGACACCGCGGCAGCGGGATTGCACCTAAGAGCCGGGCTAGCCACCT
TCTGCACCGTGCTCCTCTCGTTCGTTGCGATCGCATGAGGGTTGCACCCTTGAAGCAACA
CTCATTTTCGCTGATTGAAAGAACCCGATTTCGGTGGTTGCAGGAGCAATGTGATCTGTG
AAAAGAAAAAAAAATGAACAGAAACCCTGATCCTTTCTGAAGATGTCATCCCATCCGAAA
ACCCACTATTGCCTGCCAATTCTTGTTTGGTGTCGATGGGTGTTTGTGTGGGGTGAGTTT
CTGTACTCCCTTTTCTTATGTCGTGTACTCTGTAATTTGGTAGTAGGATGTCTGTCTCTT
TCATGCAAGGACTCCCACTATTTCTTTTTCTTTTTCCCATCTTTATTATCTTGTAAATCT
AGGGAAAACCAGTAGGTAGGCTCAAGGTTGGTTGGAATGAGAAGGTTGTTGTTGGGACAA
TGCCATCTTAAGGCTGTTATCAACTTATCATCAAGTTGCTC